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Aliases for RAP1BL Gene

Aliases for RAP1BL Gene

  • RAP1B, Member Of RAS Oncogene Family Pseudogene 3
  • Ras-Related Protein Rap-1b-Like Protein 3
  • Rap1B-Retro 3
  • HCG1757335 3

External Ids for RAP1BL Gene

Summaries for RAP1BL Gene

GeneCards Summary for RAP1BL Gene

RAP1BL (RAP1B, Member Of RAS Oncogene Family Pseudogene) is a Pseudogene. GO annotations related to this gene include GTP binding and GTPase activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAP1BL Gene

Genomics for RAP1BL Gene

Genomic Location for RAP1BL Gene

Start:
76,170,085 bp from pter
End:
76,174,354 bp from pter
Size:
4,270 bases
Orientation:
Minus strand

Genomic View for RAP1BL Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RAP1BL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAP1BL Gene

Regulatory Elements for RAP1BL Gene

Proteins for RAP1BL Gene

Post-translational modifications for RAP1BL Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAP1BL Gene

Domains for RAP1BL Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for RAP1BL Gene

Function for RAP1BL Gene

Gene Ontology (GO) - Molecular Function for RAP1BL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005525 GTP binding IEA --
genes like me logo Genes that share ontologies with RAP1BL: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RAP1BL Gene

Localization for RAP1BL Gene

Gene Ontology (GO) - Cellular Components for RAP1BL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005829 cytosol IEA --
GO:0005886 plasma membrane IEA --
genes like me logo Genes that share ontologies with RAP1BL: view

Pathways for RAP1BL Gene

SuperPathways for RAP1BL Gene

No Data Available

Interacting Proteins for RAP1BL Gene

Gene Ontology (GO) - Biological Process for RAP1BL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007264 small GTPase mediated signal transduction IEA --
genes like me logo Genes that share ontologies with RAP1BL: view

No data available for Pathways by source for RAP1BL Gene

Transcripts for RAP1BL Gene

mRNA/cDNA for RAP1BL Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RAP1BL Gene

No ASD Table

Relevant External Links for RAP1BL Gene

GeneLoc Exon Structure for
RAP1BL

Expression for RAP1BL Gene

mRNA expression in normal human tissues for RAP1BL Gene

genes like me logo Genes that share expressions with RAP1BL: view

Orthologs for RAP1BL Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for RAP1BL Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm9392 16
Species with no ortholog for RAP1BL:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RAP1BL Gene

ENSEMBL:
Gene Tree for RAP1BL (if available)
TreeFam:
Gene Tree for RAP1BL (if available)

Paralogs for RAP1BL Gene

No data available for Paralogs for RAP1BL Gene

Variants for RAP1BL Gene

Relevant External Links for RAP1BL Gene

HapMap Linkage Disequilibrium report
RAP1BL

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RAP1BL Gene

Disorders for RAP1BL Gene

No disorders were found for RAP1BL Gene.

No data available for UniProtKB/Swiss-Prot for RAP1BL Gene

Publications for RAP1BL Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  2. The DNA sequence and comparative analysis of human chromosome 5. (PMID: 15372022) Schmutz J. … Rubin E.M. (Nature 2004) 3
  3. HRap1B-retro: a novel human processed rap1B gene blurs the picture? (PMID: 16307016) Zemojtel T. … Zwartkruis F.J. (Leukemia 2006) 3
  4. Retrotransposition and mutation events yield Rap1 GTPases with differential signalling capacity. (PMID: 20170508) Zemojtel T. … Zwartkruis F.J. (BMC Evol. Biol. 2010) 3
  5. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3

Products for RAP1BL Gene

Sources for RAP1BL Gene

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