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Aliases for RANP1 Gene

Aliases for RANP1 Gene

  • RAN, Member RAS Oncogene Family Pseudogene 1 2 3 5
  • Ras-Like 3
  • TC4 3

External Ids for RANP1 Gene

Previous GeneCards Identifiers for RANP1 Gene

  • GC06P030514
  • GC06P030559
  • GC06P030561
  • GC06Pc30590
  • GC06P030453
  • GC06P030253
  • GC06P030486
  • GC06P030629
  • GC06P030651

Summaries for RANP1 Gene

GeneCards Summary for RANP1 Gene

RANP1 (RAN, Member RAS Oncogene Family Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RANP1 Gene

Genomics for RANP1 Gene

Regulatory Elements for RANP1 Gene

Enhancers for RANP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F030481 1.1 Ensembl ENCODE 0.8 -3.6 -3600 0.7 CTCF ARID4B ZNF48 ZNF2 RAD21 GLIS2 ZNF143 SMC3 ZNF391 ZNF600 HLA-E RANP1 GC06P030782
GH06F030483 0.2 ENCODE 0.8 -2.0 -2027 0.2 CTCF PKNOX1 RAD21 ZNF48 RFX5 SMC3 MIXL1 EZH2 GATAD2A ZNF654 RANP1 GC06P030782
GH06F030480 1.1 FANTOM5 ENCODE 0.4 -5.2 -5191 0.3 IKZF1 EZH2 GC06P030782 RANP1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RANP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RANP1 Gene

Chromosome:
6
Start:
30,485,885 bp from pter
End:
30,486,976 bp from pter
Size:
1,092 bases
Orientation:
Plus strand

Genomic View for RANP1 Gene

Genes around RANP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RANP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RANP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RANP1 Gene

Post-translational modifications for RANP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RANP1 Gene

Domains & Families for RANP1 Gene

Suggested Antigen Peptide Sequences for RANP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for RANP1 Gene

Function for RANP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RANP1 Gene

Localization for RANP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RANP1 Gene

Pathways & Interactions for RANP1 Gene

SuperPathways for RANP1 Gene

No Data Available

Interacting Proteins for RANP1 Gene

Gene Ontology (GO) - Biological Process for RANP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RANP1 Gene

Transcripts for RANP1 Gene

mRNA/cDNA for RANP1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RANP1 Gene

No ASD Table

Relevant External Links for RANP1 Gene

GeneLoc Exon Structure for
RANP1
ECgene alternative splicing isoforms for
RANP1

Expression for RANP1 Gene

mRNA expression in normal human tissues for RANP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RANP1 Gene:

RANP1
genes like me logo Genes that share expression patterns with RANP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RANP1 Gene

Orthologs for RANP1 Gene

Evolution for RANP1 Gene

ENSEMBL:
Gene Tree for RANP1 (if available)
TreeFam:
Gene Tree for RANP1 (if available)

No data available for Orthologs for RANP1 Gene

Paralogs for RANP1 Gene

No data available for Paralogs for RANP1 Gene

Variants for RANP1 Gene

Relevant External Links for RANP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RANP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RANP1 Gene

Disorders for RANP1 Gene

Relevant External Links for RANP1

Human Genome Epidemiology (HuGE) Navigator
RANP1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RANP1

No disorders were found for RANP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RANP1 Gene

Publications for RANP1 Gene

  1. Quantitative Lys-I/-Gly-Gly (diGly) proteomics coupled with inducible RNAi reveals ubiquitin-mediated proteolysis of DNA damage-inducible transcript 4 (DDIT4) by the E3 ligase HUWE1. (PMID: 25147182) Thompson J.W. … Luchansky S.J. (J. Biol. Chem. 2014) 3 64
  2. New genetic associations detected in a host response study to hepatitis B vaccine. (PMID: 20237496) Davila S. … Seielstad M. (Genes Immun. 2010) 3 64
  3. Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity. (PMID: 16702430) Shiina T. … Bahram S. (Genetics 2006) 3 64
  4. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 3 64

Products for RANP1 Gene

Sources for RANP1 Gene

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