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Aliases for RANP1 Gene

Aliases for RANP1 Gene

  • RAN, Member RAS Oncogene Family Pseudogene 1 2 3 5
  • Ras-Like 3
  • TC4 3

External Ids for RANP1 Gene

Previous GeneCards Identifiers for RANP1 Gene

  • GC06P030514
  • GC06P030559
  • GC06P030561
  • GC06Pc30590
  • GC06P030453
  • GC06P030253
  • GC06P030486
  • GC06P030629
  • GC06P030651
  • GC06P030758

Summaries for RANP1 Gene

GeneCards Summary for RANP1 Gene

RANP1 (RAN, Member RAS Oncogene Family Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RANP1 Gene

Genomics for RANP1 Gene

Regulatory Elements for RANP1 Gene

Enhancers for RANP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G031353 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.1 +870.3 870307 7.0 HDGF PKNOX1 ATF1 ZNF493 WRNIP1 ZFP64 SIN3A NSD2 ZNF2 GLIS2 HLA-C LY6G5B CCHCR1 PPT2 LSM2 ATF6B DDX39B HLA-B ENSG00000271581 TCF19
GH06G031137 1.3 Ensembl ENCODE 10.1 +651.8 651817 0.6 HDGF PKNOX1 ATF1 ARNT ZNF493 ARID4B DMAP1 ZNF2 ZNF48 ZNF121 HCG18 LSM2 LY6G5B NFKBIL1 GTF2H4 PSORS1C2 DDX39B ATF6B PSORS1C1 RPL3P2
GH06G030194 1.1 ENCODE 10.2 -290.6 -290558 1.6 ZFP64 ARID4B DMAP1 YY1 SLC30A9 ZNF302 SP3 SP5 MXD4 ZHX2 HCG18 GTF2H4 TRIM31 HCG4P7 GNL1 ZNRD1ASP CCHCR1 PPP1R10 ETF1P1 TCF19
GH06G030162 1.1 ENCODE 10.1 -322.1 -322120 2.8 HDGF PKNOX1 ARNT ZFP64 SIN3A ARID4B DMAP1 FEZF1 ZNF2 YY1 HCG18 HLA-U GTF2H4 HCG4P7 ZNRD1ASP CCHCR1 PPP1R10 ETF1P1 TCF19 TRIM26
GH06G029672 0.8 dbSUPER 10.1 -812.7 -812707 1.7 ZFP64 ZNF354C FOS ZNF654 ZNF680 ZNF426 OVOL3 REST ZNF623 ZNF518A ZFP57 ZNRD1ASP GABBR1 SUMO2P1 HCG17 ZNF311 HLA-H RANP1 GNL1 HCG4P7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RANP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RANP1 Gene

Chromosome:
6
Start:
30,485,885 bp from pter
End:
30,486,976 bp from pter
Size:
1,092 bases
Orientation:
Plus strand

Genomic View for RANP1 Gene

Genes around RANP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RANP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RANP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RANP1 Gene

Post-translational modifications for RANP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RANP1 Gene

Domains & Families for RANP1 Gene

Suggested Antigen Peptide Sequences for RANP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for RANP1 Gene

Function for RANP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RANP1 Gene

Localization for RANP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RANP1 Gene

Pathways & Interactions for RANP1 Gene

SuperPathways for RANP1 Gene

No Data Available

Interacting Proteins for RANP1 Gene

Gene Ontology (GO) - Biological Process for RANP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RANP1 Gene

Drugs & Compounds for RANP1 Gene

No Compound Related Data Available

Transcripts for RANP1 Gene

mRNA/cDNA for RANP1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RANP1 Gene

No ASD Table

Relevant External Links for RANP1 Gene

GeneLoc Exon Structure for
RANP1
ECgene alternative splicing isoforms for
RANP1

Expression for RANP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RANP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RANP1 Gene:

RANP1
genes like me logo Genes that share expression patterns with RANP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RANP1 Gene

Orthologs for RANP1 Gene

Evolution for RANP1 Gene

ENSEMBL:
Gene Tree for RANP1 (if available)
TreeFam:
Gene Tree for RANP1 (if available)

No data available for Orthologs for RANP1 Gene

Paralogs for RANP1 Gene

No data available for Paralogs for RANP1 Gene

Variants for RANP1 Gene

Relevant External Links for RANP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RANP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RANP1 Gene

Disorders for RANP1 Gene

Relevant External Links for RANP1

Human Genome Epidemiology (HuGE) Navigator
RANP1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RANP1

No disorders were found for RANP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RANP1 Gene

Publications for RANP1 Gene

  1. Quantitative Lys-I/-Gly-Gly (diGly) proteomics coupled with inducible RNAi reveals ubiquitin-mediated proteolysis of DNA damage-inducible transcript 4 (DDIT4) by the E3 ligase HUWE1. (PMID: 25147182) Thompson J.W. … Luchansky S.J. (J. Biol. Chem. 2014) 3 64
  2. New genetic associations detected in a host response study to hepatitis B vaccine. (PMID: 20237496) Davila S. … Seielstad M. (Genes Immun. 2010) 3 64
  3. Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity. (PMID: 16702430) Shiina T. … Bahram S. (Genetics 2006) 3 64
  4. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 3 64

Products for RANP1 Gene

Sources for RANP1 Gene

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