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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

RAN Gene

protein-coding GIFtS: 67
GCID: GC12P131356

RAN, member RAS oncogene family

Explore 65 diseases affiliated with
RAN via

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

Aliases
RAN, Member RAS Oncogene Family¹ ²		GTPase Ran² ³
ARA24¹ ² ³ ⁵		OK/SW-Cl.81¹
Gsp1¹ ²		RanGTPase²
TC4¹ ²		GTP-Binding Nuclear Protein Ran²
Androgen Receptor-Associated Protein 24² ³		Guanosine Triphosphatase Ran²
Ras-Like Protein TC4² ³		Member RAS Oncogene Family²
Ras-Related Nuclear Protein² ³

External Ids:	HGNC: 9846¹	Entrez Gene: 5901²	Ensembl: ENSG00000132341⁷	OMIM: 601179⁵	UniProtKB: P62826³

Export aliases for RAN gene to outside databases

Previous GC identifers: GC12P129785 GC12P131119 GC12P030224 GC12P129709 GC12P129881 GC12P128338

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RAN:

RAN (ras-related nuclear protein) is a small GTP binding protein belonging to the RAS superfamily that is essential for

the translocation of RNA and proteins through the nuclear pore complex. The RAN protein is also involved in control of

DNA synthesis and cell cycle progression. Nuclear localization of RAN requires the presence of regulator of chromosome

condensation 1 (RCC1). Mutations in RAN disrupt DNA synthesis. Because of its many functions, it is likely that RAN

interacts with several other proteins. RAN regulates formation and organization of the microtubule network

independently of its role in the nucleus-cytosol exchange of macromolecules. RAN could be a key signaling molecule

regulating microtubule polymerization during mitosis. RCC1 generates a high local concentration of RAN-GTP around

chromatin which, in turn, induces the local nucleation of microtubules. RAN is an androgen receptor (AR) coactivator

that binds differentially with different lengths of polyglutamine within the androgen receptor. Polyglutamine repeat

expansion in the AR is linked to Kennedy's disease (X-linked spinal and bulbar muscular atrophy). RAN coactivation of

the AR diminishes with polyglutamine expansion within the AR, and this weak coactivation may lead to partial androgen

insensitivity during the development of Kennedy's disease. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: RAN_HUMAN, P62826

Function: GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the

nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity). The

complex with BIRC5/ survivin plays a role in mitotic spindle formation by serving as a physical scaffold to help

deliver the RAN effector molecule TPX2 to microtubules. Acts as a negative regulator of the kinase activity of VRK1

and VRK2

Function: Enhances AR-mediated transactivation. Transactivation decreases as the poly-Gln length within AR increases

Gene Wiki entry for RAN (Ran)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000012.11 NC_018923.1 NT_009755.19

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the RAN gene promoter:
GR Max AP-1 ATF-2 GR-alpha c-Jun c-Myc
Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): RAN promoter sequence

Search SABiosciences Chromatin IP Primers for RAN

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RAN

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12q24.3 Ensembl cytogenetic band: 12q24.33 HGNC chromosome: 12

RAN Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RAN gene location

GeneLoc information about chromosome 12 GeneLoc Exon Structure

GeneLoc location for GC12P131356: view genomic region (about GC identifiers)

Start:	131,356,424 bp from pter	End:	131,362,223 bp from pter
Size:	5,800 bases	Orientation:	plus strand

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RAN_HUMAN, P62826 (See protein sequence)

Recommended Name: GTP-binding nuclear protein Ran

Size: 216 amino acids; 24423 Da

Subunit: Monomer. Also forms a complex with CHC1 and interacts with the AR N-terminal poly-Gln region. The interaction

with AR is inversely correlated with the poly-Gln length. Part of a complex consisting of RANBP9, Ran, DYRK1B and

COPS5. Found in a nuclear export complex with RANBP3 and XPO1. Component of a nuclear export receptor complex composed

of KPNB1, Ran, SNUPN and XPO1. Found in a trimeric export complex with SNUPN, Ran and XPO1. Interacts with RANBP10. In

case of HIV-1 infection, found in a complex with HIV-1 Rev, RNAs containing a Rev response element (RRE) and XPO1.

Found in a complex with HTLV-1 Rex, RANBP3 and XPO1. Interacts in its GTP-bound form with BIRC5/survivin at S and M

phases of the cell cycle. Interacts with TERT; the interaction requires hydrogen peroxide-mediated phosphorylation of

TERT and transports TERT to the nucleus. Interacts with MAD2L2. Interacts with RANBP10 (By similarity). Interacts with

VRK1 and VRK3. Interacts with isoform 1 and isoform 2 of VRK2

Subcellular location: Nucleus. Cytoplasm. Melanosome. Note=Predominantly nuclear during interphase (By similarity).

Becomes dispersed throughout the cytoplasm during mitosis. Identified by mass spectrometry in melanosome fractions

from stage I to stage IV

Sequence caution: Sequence=BAB93486.1; Type=Erroneous initiation; Note=Translation N-terminally extended;

6/33 PDB 3D structures from and Proteopedia for RAN (see all 33):

1I2M (3D)

1IBR (3D)

1K5D (3D)

1K5G (3D)

1QBK (3D)

1RRP (3D)

Secondary accessions: A8K3Z8 P17080 P28746 P28747 Q6IPB2 Q86V08 Q8NI90 Q9CSP3 Q9CWI7 Q9CZA2 Q9UDJ5

Q9UEU9

Explore the universe of human proteins at neXtProt for RAN: NX_P62826

Post-translational modifications:

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_P62826

RAN Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins: NP_006316.1

ENSEMBL proteins:

ENSP00000446215 ENSP00000396127 ENSP00000437950 ENSP00000441210 ENSP00000376176

ENSP00000444042 ENSP00000376174 ENSP00000254675

Reactome Protein details: P62826
Human Recombinant Protein Products:

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	Novus Biologicals RAN Proteins Novus Biologicals RAN Lysate
	Browse Sino Biological Recombinant Proteins
	ProSpec Recombinant Protein for RAN
	Browse Proteins at Uscn

Gene Ontology (GO): 5/8 cellular component terms (GO ID links to tree view) (see all 8): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0000785	colocalizes with chromatin	IDA	1961752
GO:0005622	intracellular	--	--
GO:0005634	nucleus	--	--
GO:0005643	nuclear pore	NAS	8421051
GO:0005654	nucleoplasm	TAS	--

RAN for ontologies About GeneDecksing

RAN Antibody Products:

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Assay Products for RAN:

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	GenScript Custom Assay Services for RAN
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	Browse ELISAs and CLIAs at Uscn

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

RAN for domains About GeneDecksing

3 InterPro domains/families:

IPR002041 Ran_GTPase

IPR005225 Small_GTP-bd_dom

IPR001806 Small_GTPase

Graphical View of Domain Structure for InterPro Entry P62826

ProtoNet protein and cluster: P62826

UniProtKB/Swiss-Prot: RAN_HUMAN, P62826

Similarity: Belongs to the small GTPase superfamily. Ran family

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

UniProtKB/Swiss-Prot: RAN_HUMAN, P62826

Function: GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the

nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity). The

complex with BIRC5/ survivin plays a role in mitotic spindle formation by serving as a physical scaffold to help

deliver the RAN effector molecule TPX2 to microtubules. Acts as a negative regulator of the kinase activity of VRK1

and VRK2

Function: Enhances AR-mediated transactivation. Transactivation decreases as the poly-Gln length within AR increases

Genatlas biochemistry entry for RAN:

Ras related GTPase component of the nuclear protein complex (NPC) mediating nucleocytoplasmic transport of proteins and

ribonucleoproteins,expressed in a human teratocarcinoma cell line and in a range of human cell types

miRNA Products:		miRTarBase miRNAs that target RAN: hsa-mir-29a (MIRT001196)

		OriGene 3'-UTR Clone: RAN Browse MicroRNA Expression Plasmids
		QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RAN
		8/18 QIAGEN miScript miRNA Assays for microRNAs that regulate RAN (see all 18):
		hsa-miR-495 hsa-miR-181c hsa-miR-513a-5p hsa-miR-134 hsa-miR-197 hsa-miR-766 hsa-miR-548a-3p hsa-miR-4274

		SwitchGear 3'UTR luciferase reporter plasmid: RAN 3' UTR sequence

Inhib. RNA Products:		Browse for Gene Knock-down Tools from EMD Millipore
		OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RAN (see all 7) OriGene shRNA RFP: RAN OriGene siRNA: RAN
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DNA2.0 Custom Protein Engineering Service for RAN

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Cell Line Products:		GenScript Custom overexpressing Cell Line Services for RAN
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In Situ Assay
Products:

Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for RAN

Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0003682	chromatin binding	TAS	1961752
GO:0003713	transcription coactivator activity	NAS	15572661
GO:0003924	GTPase activity	TAS	10400640
GO:0005515	protein binding	IPI	18617507
GO:0005525	GTP binding	IDA	1961752

RAN for ontologies About GeneDecksing

8 GenomeRNAi human phenotypes for RAN:

Decreased Hepatitis C virus re	Decreased cell number, increas	Decreased homologous recombina	Decreased viability
Decreased viability of wild-ty	Increased gamma-H2AX phosphory	Increased number of mitotic ce	S arrest

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways - 5/26 super-pathways (see all 26) About this table

See pathways by source

Super-pathway

contained gene-specific pathways

NEP/NS2 Interacts with the Cellular Export Machinery

	NEP/NS2 Interacts with the Cellular Export Machinery	1.00			Sumoylation by RanBP2 regulates transcriptional repression	0.18
	Export of Viral Ribonucleoproteins from Nucleus	1.00

Translocation of Influenza A virus nonstructural protein 1 (NS1A) into the nucleus

	Nuclear import of Rev protein	0.76			Rev-mediated nuclear export of HIV-1 RNA	0.71
	Interactions of Rev with host cellular proteins	0.72

Cell cycle_Spindle assembly and chromosome separation

Cell cycle_Spindle assembly and chromosome separation

1.00

Cell cycle Spindle assembly and chromosome separation

0.94

HIV Infection

HIV Infection

1.00

Host Interactions of HIV factors

0.64

Regulatory RNA pathways

Regulatory RNA pathways

1.00

MicroRNA (miRNA) Biogenesis

0.88

Pathway sources
See GeneCards unified pathways
Show all pathways

1 EMD Millipore Pathway for RAN

Cell cycle Spindle assembly and chromosome separation

4 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for RAN

	SMAD Signaling Network
	Ran Pathway
	JAK-STAT Pathway
	SUMO Pathway

2 Cell Signaling Technology (CST) Pathways for RAN

	Cell Cycle / Checkpoint Control
	Cytoskeletal Signaling

1 GeneGo (Thomson Reuters) Pathway for RAN

Cell cycle Spindle assembly and chromosome separation

5/8 BioSystems Pathways for RAN (see all 8)

	Androgen receptor signaling pathway
	Canonical NF-kappaB pathway
	Aurora A signaling
	FoxO family signaling
	Role of Calcineurin-dependent NFAT signaling in lymphocytes

5/18 Reactome Pathways for RAN (see all 18)

	Late Phase of HIV Life Cycle
	Metabolism
	Interactions of Rev with host cellular proteins
	Disease
	Regulation of Cholesterol Biosynthesis by SREBP (SREBF)

2 Kegg Pathways (Kegg details for RAN):

	Ribosome biogenesis in eukaryotes
	RNA transport

RAN for pathways About GeneDecksing

Interactions:

SABiosciences Gene Network Central^TM Interacting Genes and Proteins Network for RAN

STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

5/252 Interacting proteins for RAN (P62826^{1, 2, 3} ENSP00000396127⁴) via UniProtKB, MINT, STRING, and/or I2D (see all 252)

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
RANBP1	P43487²^,³, ENSP00000327583⁴	MINT-73242 I2D: score=6 STRING: ENSP00000327583
VRK1	Q99986¹^,³, ENSP00000216639⁴	EBI-286642,EBI-1769146 I2D: score=2 STRING: ENSP00000216639
KIAA1377	Q9P2H0²^,³	MINT-63977 I2D: score=4
IPO13	O94829²^,³, ENSP00000361418⁴	MINT-8107594 MINT-8107327 MINT-8109968 I2D: score=1 STRING: ENSP00000361418
TNPO1	Q92973¹^,²^,³, ENSP00000336712⁴	EBI-286642,EBI-1965561 MINT-24902 I2D: score=10 STRING: ENSP00000336712

About this table

Gene Ontology (GO): 5/21 biological process terms (GO ID links to tree view) (see all 21): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0006184	GTP catabolic process	--	--
GO:0006259	DNA metabolic process	TAS	8421051
GO:0006405	RNA export from nucleus	NAS	--
GO:0006606	protein import into nucleus	--	--
GO:0006611	protein export from nucleus	NAS	--

RAN for ontologies About GeneDecksing

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

RAN for compounds About GeneDecksing

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for RAN

1 HMDB Compound for RAN About this table

Compound	Synonyms	CAS #	PubMed Ids
Guanosine triphosphate	5'-GTP (see all 10)	86-01-1	--

1 DrugBank Compound for RAN About this table

Compound	Synonyms	CAS #	Type	Actions	PubMed Ids
Guanosine-5'-Diphosphate	--	146-91-8	target	--	10592235

10/22 Novoseek chemical compound relationships for RAN gene (see all 22) About this table

Compound	-log (P-Val)	Hits	PubMed IDs for Articles with Shared Sentences (# sentences)
gtp	79.5	104	10078529 (4), 10779340 (4), 7548002 (4), 10471274 (3) (see all 50)
leptomycin b	70.7	4	10779340 (1), 16319068 (1), 10601307 (1), 15020682 (1)
gdp	70.6	37	9843686 (3), 7548002 (3), 7885480 (2), 9121474 (2) (see all 18)
xanthosine 5'-triphosphate	69	2	9003787 (1)
gppnhp	53.1	3	10078529 (1), 10367892 (1)
nocodazole	30	1	15522227 (1)
guanosine	22	3	16123300 (1), 9188526 (1), 10334990 (1)
digitonin	17.7	1	9585406 (1)
oligonucleotide	12.1	1	1421173 (1)
topotecan	9.42	1	9779879 (1)

Search CenterWatch for drugs/clinical trials and news about RAN

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for RAN gene:

NM_006325.3

Unigene Cluster for RAN:

RAN, member RAS oncogene family

Hs.10842 [show with all ESTs]

Unigene Representative Sequence: AF052578

13 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000543796(uc001uir.3) ENST00000448750(uc010tbk.2) ENST00000536606

ENST00000537745 ENST00000541630(uc010tbl.2) ENST00000477395 ENST00000392369(uc001uis.3)

ENST00000535090 ENST00000541679 ENST00000464211 ENST00000392367 ENST00000539498

ENST00000254675

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		hsa-miR-495 hsa-miR-181c hsa-miR-513a-5p hsa-miR-134 hsa-miR-197 hsa-miR-766 hsa-miR-548a-3p hsa-miR-4274

		SwitchGear 3'UTR luciferase reporter plasmid: RAN 3' UTR sequence

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Additional cDNA sequence:

AB062399.1 AF052578.1 AF054183.1 AF501887.1 AK300934.1 AK311223.1 AK312466.1 AK316193.1

AL357616.1 BC000852.1 BC004272.1 BC014518.2 BC014901.2 BC016654.1 BC022813.1 BC051908.2

BC072000.1 BT007271.1 CR450347.1 M31469.1

24/46 DOTS entries (see all 46):

DT.100694739 DT.100694752 DT.91792761 DT.100694744 DT.100694740 DT.91792616 DT.91793048 DT.100694747

DT.100045568 DT.121186242 DT.121186243 DT.91792994 DT.95071151 DT.121345809 DT.95162203 DT.100728372

DT.120540 DT.100694751 DT.121186328 DT.121345753 DT.91792582 DT.95162201 DT.100694756 DT.100694763

24/2135 AceView cDNA sequences (see all 2135):

BU159096 BE313581 AI417492 BU542690 BE266748 AA620690 BC022813 CR603594

BU681501 BU735368 BE384579 AA308406 BM840007 BE265197 AA309805 BM799215

AA908547 N27534 BG111605 AA952935 BQ882077 BG479901 BU855001 CA776836

GeneLoc Exon Structure

5/6 Alternative Splicing Database (ASD) splice patterns (SP) for RAN (see all 6) About this scheme

ExUns:	1a	·	1b	·	1c	^	2a	·	2b	^	3	^	4	^	5a	·	5b	·	5c	^	6a	·	6b	^	7a	·	7b
SP1:							-
SP2:							-		-
SP3:							-
SP4:							-				-		-		-		-		-		-
SP5:

ECgene alternative splicing isoforms for RAN

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

RAN expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: TGCTTCATCT

About this image
See RAN Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for RAN

SOURCE GeneReport for Unigene cluster: Hs.10842

UniProtKB/Swiss-Prot: RAN_HUMAN, P62826

Tissue specificity: Expressed in a variety of tissues

SABiosciences Custom PCR Arrays for RAN

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In Situ
Assay Products:

Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for RAN

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of eukaryotes.

Orthologs for RAN gene from 10/40 species (see all 40) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
mouse (Mus musculus)	Mammalia	Ran^{1 , 5}	RAN, member RAS oncogene family^{1, 5}	89.66(n)¹ 100(a)¹		5 (67.99 cM)⁵ 19384¹ NM_009391.3¹ NP_033417.1¹ 129020069⁵
chicken (Gallus gallus)	Aves	RAN¹	RAN, member RAS oncogene family	88.58(n) 98.61(a)		396193 NM_205258.2 NP_990589.1
lizard (Anolis carolinensis)	Reptilia	RAN⁶	--	98(a)	1 ↔ 1	GL343364.1(472-6143)
African clawed frog (Xenopus laevis)	Amphibia	ran-1-prov²	RAN, member RAS oncogene family	82.73(n)		AB030945.1
zebrafish (Danio rerio)	Actinopterygii	ran²	ras-related nuclear protein	81.08(n)		30572 BC058047.1
fruit fly (Drosophila melanogaster)	Insecta	ran-like³ ran¹	RAN small monomeric GTPase³ CG1404-PA¹	60(a)³ 71.91(n)¹ 87.04(a)¹		71D3³ 44072¹ NM_143712.3¹ NP_651969.1¹
worm (Caenorhabditis elegans)	Secernentea	ran-1^{1 , 3}	GTP-binding protein³ Protein RAN-1¹	93(a)³ 73.95(n)¹ 89.81(a)¹		III(10818478-10819656)³ 176503¹ NM_066968.4¹ NP_499369.1¹
baker's yeast (Saccharomyces cerevisiae)	Saccharomycetes	GSP2(YOR185C)⁴ GSP1¹	GTP binding protein (mammalian Ranp homolog) involved more⁴ Gsp1p¹	70.75(n)¹ 83.02(a)¹		15(682106-681444)⁴ 851000¹ NP_013396.1¹ 854357⁴ NP_014828.1⁴
thale cress (Arabidopsis thaliana)	eudicotyledons	RAN2⁶ RAN3⁶ (see all 4)	GTP-binding nuclear protein Ran-3 (see all 4)	73(a) 72(a) (see all 4)	many → 1 many → 1 (see all 4)	5(6762724-6764671) 5(22392176-22394172)
rice (Oryza sativa)	Liliopsida	AB015287.1²	--	77.07(n)		AB015287.1

ENSEMBL Gene Tree for RAN (if available)
TreeFam Gene Tree for RAN (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
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Paralogs for RAN gene

RABL2B² RABL2A²

18/71 SIMAP similar genes for RAN using alignment to 6 protein entries: RAN_HUMAN (see all proteins) (see all similar genes):

RANP1 TC4 RAP2A DKFZp547A0616 RAB11A RAP2C

RAB27A RAP2B RAB7A RAB15 DKFZp686J06205 RAB21

RAB36 RAB38 RAB13 RAP1B RAB43 RALB

RAN for paralogs About GeneDecksing

5/15 Pseudogenes.org Pseudogenes for RAN (see all 15)
PGOHUM00000242805 PGOHUM00000258697 PGOHUM00000258698 PGOHUM00000259570 PGOHUM00000237958

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
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SNP ID	Valid	Clinical significance	Chr 12 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs144712693^1,2		--	131354671(+)	`GTTCCA/GTCACA`	1	--	us2k¹		0	--	--	--	--
rs11346664^1,2	C,	--	131354743(+)	`CAATT-/AAAAAA`	1	--	us2k¹ tfbs³		0	--	--	--	--
rs138449059^1,2		--	131354748(+)	`AAAAAA/CAACAA`	1	--	us2k¹		0	--	--	--	--
rs200075341^1,2		--	131354751(+)	`AAAAA-/CAACAA`	1	--	us2k¹		0	--	--	--	--
rs200159005^1,2		--	131354784(+)	`TATGC-/TTTTG TTTTA`	1	--	us2k¹		0	--	--	--	--
rs192798526^1,2		--	131354948(+)	`ATTGCA/CCATTG`	1	--	us2k¹		0	--	--	--	--
rs75229680^1,2	F,	--	131355024(+)	`GTGGCC/TTAGAC`	1	--	us2k¹		1		WA	118
rs56109543^1,2	C,	--	131355065(+)	`TTTCTC/TAACAC`	1	--	us2k¹		6		WA CSA NA EA	363
rs183239027^1,2		--	131355210(+)	`CCGGGC/GTCACA`	1	--	us2k¹		0	--	--	--	--
rs78389074^1,2	C,	--	131355412(+)	`CTGCAG/AGGAGG`	1	--	us2k¹		4		NA WA EA	360

HapMap Linkage Disequilibrium report for RAN (131356424 - 131362223 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for RAN: --
Human Gene Mutation Database (HGMD): RAN

SABiosciences Cancer Mutation PCR Assays

QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing RAN

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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RAN for disorders           About GeneDecksing

OMIM gene information: 601179    OMIM disorders: --

20/65 diseases for RAN (see all 65):    About MalaCards

spinal-bulbar muscular atrophy diamond-blackfan anemia kennedy's disease human t-cell leukemia virus type 1

adenomatous polyposis coli muscular atrophy clear cell renal cell carcinoma non-hodgkin lymphoma

myelomonocytic leukemia myeloproliferative disorder chronic myelomonocytic leukemia acquired immunodeficiency syndrome

lymphoblastic leukemia renal cell carcinoma myeloid leukemia hodgkin's lymphoma

pleomorphic adenoma myelodysplastic syndrome papillary thyroid carcinoma acute lymphoblastic leukemia

10/29 Novoseek disease relationships for RAN gene (see all 29) About this table

Disease	-log (P-Val)	Hits	PubMed IDs for Articles with Shared Sentences (# sentences)
thyroid carcinoma anaplastic	42.9	1	16264365 (1)
tumors	41.4	54	20515613 (2), 17483353 (2), 8025268 (1), 9798676 (1) (see all 43)
cancer	38.6	32	18563304 (2), 14585179 (1), 15475460 (1), 16757353 (1) (see all 23)
neoplastic transformation	34.2	1	9765202 (1)
thyroid papillary carcinoma	31.2	2	17943694 (1), 15761501 (1)
pancreatic cancer	21.5	2	17088984 (1), 19639215 (1)
myelodysplastic syndromes	20.9	2	8431911 (1), 15345287 (1)
colon cancer	8.7	1	10357561 (1)
melanoma	7.09	5	2278957 (1), 16627974 (1), 1643431 (1), 8062279 (1)
necrosis	3.56	1	8062279 (1)

Human Genome Epidemiology (HuGE) Navigator: RAN (49 documents)
Tumor Gene Database (TGDB): RAN

Export disorders for RAN gene to outside databases

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
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PubMed articles for RAN gene, integrated from 9 sources (see all 443):
(articles sorted by number of sources associating them with RAN)

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Ran/TC4: a small nuclear GTP-binding protein that regulates DNA synthesis. (PubMed id 8421051)^{1, 2, 3} Ren M.... Rush M.G. (1993)
Structure of a Ran-binding domain complexed with Ran bound to a GTP analogue: implications for nuclear transport. (PubMed id 10078529)^{1, 2, 9} Vetter I.R.... Wittinghofer A. (1999)
Proteomics identification of nuclear Ran GTPase as an inhibitor of human VRK1 and VRK2 (vaccinia-related kinase) activities. (PubMed id 18617507)^{1, 2, 9} Sanz-Garcia M....Lazo P.A. (2008)
The specificity of the CRM1-Rev nuclear export signal interaction is mediated by RanGTP. (PubMed id 9837918)^{1, 2, 9} Askjaer P.... Kjems J. (1998)
Crystal structure of the nuclear Ras-related protein Ran in its GDP- bound form. (PubMed id 7885480)^{1, 2, 9} Scheffzek K.... Wittinghofer A. (1995)
The mitotic arrest deficient protein MAD2B interacts with the small GTPase RAN throughout the cell cycle. (PubMed id 19753112)^{1, 2} Medendorp K....van Kessel A.G. (2009)
A survivin-ran complex regulates spindle formation in tumor cells. (PubMed id 18591255)^{1, 2} Xia F....Altieri D.C. (2008)
Quantitative analysis of global ubiquitination in HeLa cells by mass spectrometry. (PubMed id 18781797)^{1, 2} Meierhofer D.... Kaiser P. (2008)
Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. (PubMed id 17081065)^{1, 2} Chi A....Hunt D.F. (2006)
Architecture of CRM1/Exportin1 suggests how cooperativity is achieved during formation of a nuclear export complex. (PubMed id 15574331)^{1, 2} Petosa C.... Mueller C.W. (2004)

(in PubMed, OMIM, and NCBI Bookshelf)
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		AND	OR
Aliases
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(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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Entrez Gene: 5901	HGNC: 9846	AceView: RAN	Ensembl:ENSG00000132341	euGenes: HUgn5901
ECgene: RAN	Kegg: 5901	H-InvDB: RAN

(According to HUGE)
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(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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Name	Description
PharmGKB entry for RAN	Pharmacogenomics, SNPs, Pathways
ATLAS Chromosomes in Cancer entry for RAN	Genetics and Cytogenetics in Oncology and Haematology

Intellectual Property for RAN gene
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Patent Information for RAN gene:
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GeneCards and IP:
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