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Aliases for RAI1-AS1 Gene

Subcategory (RNA class) for RAI1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for RAI1-AS1 Gene

  • RAI1 Antisense RNA 1 2 3 5
  • RAI1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for RAI1-AS1 Gene

Previous GeneCards Identifiers for RAI1-AS1 Gene

  • GC17M017663

Summaries for RAI1-AS1 Gene

GeneCards Summary for RAI1-AS1 Gene

RAI1-AS1 (RAI1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RAI1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAI1-AS1 Gene

Genomics for RAI1-AS1 Gene

Regulatory Elements for RAI1-AS1 Gene

Enhancers for RAI1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H017800 0.4 dbSUPER 12.4 -30.4 -30384 1.8 CTCF SMCR5 RAI1-AS1 RAI1 PIR43249 PIR58709
GH17H017773 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.4 -3418 2 BCOR SMARCA5 CTCF ZMYM3 SIN3A NR3C1 RAD21 ZNF316 FOS ZNF600 ENSG00000264167 RAI1-AS1
GH17H017764 1.2 Ensembl ENCODE dbSUPER 0.7 +2.9 2857 6.5 PKNOX1 KLF1 KLF17 ZIC2 ZNF664 HIC1 GLIS2 POLR2A SCRT2 SCRT1 FOXO3B ENSG00000264885 DRG2 MPRIP-AS1 FAM106A RAI1-AS1 PIR55057
GH17H017748 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.0 16986 10.3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF143 FOS ZNF286B ENSG00000264885 RAI1 USP32P2 LOC100419436 FOXO3B MPRIP-AS1 SMCR5 DRG2 ENSG00000273018
GH17H017736 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +31.3 31286 6.6 ARNT ZSCAN4 KLF17 SIN3A YBX1 GLIS2 FOS EGR2 ZNF592 ZSCAN16 RAI1 SREBF1 TOM1L2 LLGL1 PEMT ENSG00000264885 MYO15A DRC3 PIR55057 RAI1-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RAI1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RAI1-AS1 Gene

Genomic Locations for RAI1-AS1 Gene
11,668 bases
Minus strand

Genomic View for RAI1-AS1 Gene

Genes around RAI1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RAI1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RAI1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAI1-AS1 Gene

Proteins for RAI1-AS1 Gene

Post-translational modifications for RAI1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAI1-AS1 Gene

Domains & Families for RAI1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RAI1-AS1 Gene

Function for RAI1-AS1 Gene

Phenotypes From GWAS Catalog for RAI1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RAI1-AS1 Gene

Localization for RAI1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RAI1-AS1 Gene

Pathways & Interactions for RAI1-AS1 Gene

SuperPathways for RAI1-AS1 Gene

No Data Available

Interacting Proteins for RAI1-AS1 Gene

Gene Ontology (GO) - Biological Process for RAI1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RAI1-AS1 Gene

Drugs & Compounds for RAI1-AS1 Gene

No Compound Related Data Available

Transcripts for RAI1-AS1 Gene

mRNA/cDNA for RAI1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RAI1-AS1 Gene

No ASD Table

Relevant External Links for RAI1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RAI1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RAI1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for RAI1-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x13.2).
genes like me logo Genes that share expression patterns with RAI1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RAI1-AS1 Gene

Orthologs for RAI1-AS1 Gene

Evolution for RAI1-AS1 Gene

Gene Tree for RAI1-AS1 (if available)
Gene Tree for RAI1-AS1 (if available)

No data available for Orthologs for RAI1-AS1 Gene

Paralogs for RAI1-AS1 Gene

No data available for Paralogs for RAI1-AS1 Gene

Variants for RAI1-AS1 Gene

Sequence variations from dbSNP and Humsavar for RAI1-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000147080 -- 17,764,748(+) TGCCT(C/G)CCACC intron-variant
rs1000633513 -- 17,764,905(+) TTACT(A/G)TTTAT intron-variant
rs1000644264 -- 17,759,714(+) GTGCT(G/T)GTCTT intron-variant
rs1000763872 -- 17,766,093(+) ACTCA(C/T)ATTGT intron-variant, nc-transcript-variant
rs1000933340 -- 17,758,732(+) CGAGG(A/T)GCATA intron-variant, downstream-variant-500B

Relevant External Links for RAI1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RAI1-AS1 Gene

Disorders for RAI1-AS1 Gene

Relevant External Links for RAI1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RAI1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RAI1-AS1 Gene

Publications for RAI1-AS1 Gene

No publications were found for RAI1-AS1 Gene.

Products for RAI1-AS1 Gene

Sources for RAI1-AS1 Gene

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