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Aliases for RAET1K Gene

Aliases for RAET1K Gene

  • Retinoic Acid Early Transcript 1K Pseudogene 2 3

External Ids for RAET1K Gene

Previous GeneCards Identifiers for RAET1K Gene

  • GC06U900333
  • GC06M150363
  • GC06M150319

Summaries for RAET1K Gene

GeneCards Summary for RAET1K Gene

RAET1K (Retinoic Acid Early Transcript 1K Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAET1K Gene

Genomics for RAET1K Gene

Regulatory Elements for RAET1K Gene

Genomic Location for RAET1K Gene

149,998,019 bp from pter
150,005,157 bp from pter
7,139 bases
Minus strand

Genomic View for RAET1K Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RAET1K Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAET1K Gene

Proteins for RAET1K Gene

Post-translational modifications for RAET1K Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAET1K Gene

Domains for RAET1K Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RAET1K Gene

Function for RAET1K Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RAET1K Gene

Localization for RAET1K Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RAET1K Gene

Pathways for RAET1K Gene

SuperPathways for RAET1K Gene

No Data Available

Interacting Proteins for RAET1K Gene

Gene Ontology (GO) - Biological Process for RAET1K Gene


No data available for Pathways by source for RAET1K Gene

Transcripts for RAET1K Gene

mRNA/cDNA for RAET1K Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RAET1K Gene

Retinoic acid early transcript 1K pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RAET1K Gene

No ASD Table

Relevant External Links for RAET1K Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RAET1K Gene

mRNA expression in normal human tissues for RAET1K Gene

mRNA differential expression in normal tissues according to GTEx for RAET1K Gene

This gene is overexpressed in Testis (20.1).

SOURCE GeneReport for Unigene cluster for RAET1K Gene Hs.560537

genes like me logo Genes that share expressions with RAET1K: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for RAET1K Gene

Orthologs for RAET1K Gene

Evolution for RAET1K Gene

Gene Tree for RAET1K (if available)
Gene Tree for RAET1K (if available)

No data available for Orthologs for RAET1K Gene

Paralogs for RAET1K Gene

No data available for Paralogs for RAET1K Gene

Variants for RAET1K Gene

Sequence variations from dbSNP and Humsavar for RAET1K Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs1359342 -- 150,000,033(-) CAAGA(A/G)GCAGA intron-variant
rs1762124 -- 150,003,350(+) GGCAT(A/G)TGTGG intron-variant
rs1762126 -- 150,003,681(+) GCACA(A/G)GCAGT intron-variant
rs1830839 -- 150,002,622(+) TCATA(C/T)AAAGG intron-variant
rs2008717 -- 149,999,728(-) AGCAG(A/G)AACTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RAET1K Gene

Variant ID Type Subtype PubMed ID
nsv886764 CNV Loss 21882294
nsv517022 CNV Gain+Loss 19592680
esv2732866 CNV Deletion 23290073
nsv436711 OTHER Inversion 17901297
esv2732878 CNV Deletion 23290073
esv7375 CNV Loss 19470904

Relevant External Links for RAET1K Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RAET1K Gene

Disorders for RAET1K Gene

No disorders were found for RAET1K Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for RAET1K Gene

Publications for RAET1K Gene

  1. A cluster of ten novel MHC class I related genes on human chromosome 6q24.2-q25.3. (PMID: 11827464) Radosavljevic M. … Bahram S. (Genomics 2002) 2 3

Products for RAET1K Gene

Sources for RAET1K Gene

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