Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RAD52 Gene

protein-coding   GIFtS: 65
GCID: GC12M001021

RAD52 homolog (S. cerevisiae)

(Previous name: RAD52 (S. cerevisiae) homolog )
 Explore 30 diseases affiliated with
RAD52 via our new
 Human Malady Compendium 
Biological research products
for RAD52
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
RAD52 Homolog (S. Cerevisiae)1 2
RAD52 (S. Cerevisiae) Homolog1
DNA Repair Protein RAD52 Homolog2
Recombination Protein RAD522
Rhabdomyosarcoma Antigen MU-RMS-40.232

External Ids:    HGNC: 98241   Entrez Gene: 58932   Ensembl: ENSG000000020167   OMIM: 6003925   UniProtKB: P433513   

Export aliases for RAD52 gene to outside databases

Previous GC identifers: GC12M000841 GC12M000891


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RAD52:
The protein encoded by this gene shares similarity with Saccharomyces cerevisiae Rad52, a protein important for DNA
double-strand break repair and homologous recombination. This gene product was shown to bind single-stranded DNA ends,
and mediate the DNA-DNA interaction necessary for the annealing of complementary DNA strands. It was also found to
interact with DNA recombination protein RAD51, which suggested its role in RAD51 related DNA recombination and repair.
(provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: RAD52_HUMAN, P43351
Function: Involved in double-stranded break repair. Plays a central role in genetic recombination and DNA repair by
promoting the annealing of complementary single-stranded DNA and by stimulation of the RAD51 recombinase

Gene Wiki entry for RAD52


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000012.11  NC_018923.1  NT_009759.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RAD52 gene promoter:
         p53   GATA-3   ZIC2/Zic2   GATA-1   GATA-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 3): RAD52 promoter sequence
   Search SABiosciences Chromatin IP Primers for RAD52

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RAD52


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12p13-p12.2   Ensembl cytogenetic band:  12p13.33   HGNC cytogenetic band: 12p13-p12.2

RAD52 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RAD52 gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12M001021:  view genomic region     (about GC identifiers)

Start:
1,021,243 bp from pter      End:
1,100,356 bp from pter
Size:
79,114 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RAD52_HUMAN, P43351 (See protein sequence)
Recommended Name: DNA repair protein RAD52 homolog  
Size: 418 amino acids; 46169 Da
Subunit: Forms a undecameric ring. Interacts with ABL1
Subcellular location: Nucleus (Potential)
2 PDB 3D structures from and Proteopedia for RAD52:
1H2I (3D)        1KN0 (3D)    
Secondary accessions: Q13205

Explore the universe of human proteins at neXtProt for RAD52: NX_P43351

Post-translational modifications:

  • Phosphorylated upon DNA damage by ABL1, and probably by ATM or ATR1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P43351

  • RAD52 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_602296.2  
    ENSEMBL proteins: 
     ENSP00000351284   ENSP00000434703   ENSP00000387901   ENSP00000439583   ENSP00000436008  
     ENSP00000440486   ENSP00000441073   ENSP00000380407   ENSP00000443254   ENSP00000438965  
     ENSP00000445245   ENSP00000440268  
    Reactome Protein details: P43351
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: RAD52
    OriGene Custom Protein Services for RAD52 
    GenScript Custom Purified and Recombinant Proteins Services for RAD52
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for RAD52

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus TAS7774919
    GO:0005654nucleoplasm TAS--


    RAD52 for ontologies           About GeneDecksing



    RAD52 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Cell Signaling Technology (CST) Antibodies for RAD52 
    OriGene Antibodies: RAD52
    OriGene Custom Antibody Services for RAD52 
    GenScript Custom Superior Antibodies Services for RAD52
    Novus Biologicals RAD52 Antibodies
    Abcam antibodies for RAD52 
    Uscn Antibodies for RAD52
    ThermoFisher Antibodies for RAD52

    Assay Products for RAD52: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for RAD52
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for RAD52


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    RAD52 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR004585 DNA_recomb/repair_Rad52
     IPR007232 Rad52_Rad22

    Graphical View of Domain Structure for InterPro Entry P43351

    ProtoNet protein and cluster: P43351

    1 Blocks protein family: IPB007232 Rad52/22 double-strand break repair protein

    UniProtKB/Swiss-Prot: RAD52_HUMAN, P43351
    Similarity: Belongs to the RAD52 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: RAD52_HUMAN, P43351
    Function: Involved in double-stranded break repair. Plays a central role in genetic recombination and DNA repair by
    promoting the annealing of complementary single-stranded DNA and by stimulation of the RAD51 recombinase

         Genatlas biochemistry entry for RAD52:
    yeast (S cerevisiae) RAD52 homolog complexing with phosphorylated BRCA1,BRCA2 and RAD51 for DNA repair of double strand
    breaks through homologous recombination,also involved in meiotic recombination,not involved in breast cancer

    miRNA
    Products:
        
    miRTarBase miRNAs that target RAD52:
    hsa-mir-373 (MIRT003914), hsa-mir-210 (MIRT000156)

    OriGene 3'-UTR Clone: RAD52
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RAD52
    6 QIAGEN miScript miRNA Assays for microRNAs that regulate RAD52:
    hsa-miR-433 hsa-miR-145* hsa-miR-137 hsa-miR-198 hsa-miR-2114* hsa-miR-758
    SwitchGear 3'UTR luciferase reporter plasmidRAD52 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RAD52 (see all 7)
    OriGene shRNA RFP: RAD52
    OriGene siRNA: RAD52
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RAD52

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for RAD52

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RAD52 (see all 6)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RAD52
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: RAD52 (NM_134424)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for RAD52
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RAD52 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for RAD52
    Search LifeMap BioReagents cell lines for RAD52

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RAD52

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding TAS7774919
    GO:0005515protein binding IPI19338310


    RAD52 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for RAD52:
     Decreased viability of wild-ty 

    Animal Models:
         Mouse knock-out Rad52tm1Aps for RAD52
         8 MGI mutant phenotypes (inferred from 1 allele(MGI details for Rad52):
     cellular  growth/size  hematopoietic system  homeostasis/metabolism  immune system 
     mortality/aging  reproductive system  tumorigenesis 

    RAD52 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/10 super-pathways (see all 10About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Assembly of the RAD51-ssDNA nucleoprotein complex
    Assembly of the RAD51-ssDNA nucleoprotein complex1.00
    Homologous DNA pairing and strand exchange0.83
    Presynaptic phase of homologous DNA pairing and strand exchange0.83
    2Homologous Recombination Repair
    Homologous Recombination Repair1.00
    Double-Strand Break Repair0.71
    Homologous recombination repair of replication-independent double-strand breaks1.00
    3Homologous recombination
    Homologous recombination1.00
    Homologous recombination0.38
    4Integrated Pancreatic Cancer Pathway
    Integrated Pancreatic Cancer Pathway1.00
    Integrated Pancreatic Cancer Pathway0.99
    5DNA Damage
    DNA Damage1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for RAD52
        Meiosis


    2 Cell Signaling Technology (CST) Pathways for RAD52
        Cell Cycle / Checkpoint Control
    DNA Damage

    5 BioSystems Pathways for RAD52 
        DNA damage response
    Homologous recombination
    miRNAs involved in DDR
    Integrated Pancreatic Cancer Pathway
    Integrated Pancreatic Cancer Pathway

    5/7        Reactome Pathways for RAD52 (see all 7)
        Presynaptic phase of homologous DNA pairing and strand exchange
    DNA Repair
    Homologous DNA pairing and strand exchange
    Homologous recombination repair of replication-independent double-strand breaks
    Homologous Recombination Repair


    1         Kegg Pathway  (Kegg details for RAD52):
        Homologous recombination


    RAD52 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for RAD52

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/110 Interacting proteins for RAD52 (P433511, 2, 3 ENSP000003512844) via UniProtKB, MINT, STRING, and/or I2D (see all 110)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    WRNQ141911, 2, 3, ENSP000002981394EBI-706448,EBI-368417 MINT-6550741 MINT-17110 MINT-6550731 MINT-6550722 MINT-6550777 MINT-17109 MINT-6550709 MINT-6550679 MINT-6550697 MINT-6550759 I2D: score=4 STRING: ENSP00000298139
    RAD51Q066091, 2, 3, ENSP000002678684EBI-706448,EBI-1059207 MINT-6550637 I2D: score=4 STRING: ENSP00000267868
    RPA3P352441, 3, ENSP000002231294EBI-706448,EBI-1058317 I2D: score=1 STRING: ENSP00000223129
    ACTBP607093, ENSP000003499604I2D: score=1 STRING: ENSP00000349960
    ARF1P840773, ENSP000002721024I2D: score=1 STRING: ENSP00000272102
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000724double-strand break repair via homologous recombination TAS--
    GO:0000730DNA recombinase assembly TAS--
    GO:0006281DNA repair TAS--
    GO:0006302double-strand break repair TAS--
    GO:0006310DNA recombination ----


    RAD52 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    RAD52 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for RAD52
    3 Novoseek chemical compound relationships for RAD52 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    methylmethanesulfonate 60.3 5 18396468 (3), 11129042 (1)
    camptothecin 25.1 2 8226741 (1), 15929725 (1)
    cisplatin 0 1 16630539 (1)

    Search CenterWatch for drugs/clinical trials and news about RAD52 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for RAD52 gene (3 alternative transcripts): 
    NM_134424.2  NM_134422.1  NM_134423.1  

    Unigene Cluster for RAD52:

    RAD52 homolog (S. cerevisiae)
    Hs.410355  [show with all ESTs]
    Unigene Representative Sequence: BC144458
    18/23 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 23):
    ENST00000358495(uc001qis.1 uc001qit.1 uc010sdt.1 uc001qiu.1)
    ENST00000228345 ENST00000468231 ENST00000481052 ENST00000430095 ENST00000488642(uc001qiw.1)
    ENST00000535376 ENST00000542297 ENST00000543912 ENST00000461568(uc001qiv.1 uc001qix.1)
    ENST00000463750 ENST00000536177(uc010sdu.1) ENST00000542584 ENST00000545967
    ENST00000542785 ENST00000397230 ENST00000544742 ENST00000541619

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: RAD52
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RAD52
    6 QIAGEN miScript miRNA Assays for microRNAs that regulate RAD52:
    hsa-miR-433 hsa-miR-145* hsa-miR-137 hsa-miR-198 hsa-miR-2114* hsa-miR-758
    SwitchGear 3'UTR luciferase reporter plasmidRAD52 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RAD52 (see all 7)
    OriGene shRNA RFP: RAD52
    OriGene siRNA: RAD52
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RAD52
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RAD52 (see all 6)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RAD52
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: RAD52 (NM_134424)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for RAD52
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RAD52 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RAD52
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat RAD52
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RAD52
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RAD52

    Additional cDNA sequence: 

    AF125950.1 AK290047.1 AK292160.1 AK294709.1 AK299283.1 AK312026.1 AY540753.1 BC042136.1 
    BC104015.1 BC104017.1 BC114507.1 BC114954.1 BC144458.1 L33262.1 U12134.1 U27516.1 

    13 DOTS entries:

    DT.413599  DT.438191  DT.121200781  DT.433136  DT.121200733  DT.92459662  DT.95155634  DT.100744024 
    DT.121200703  DT.121200712  DT.40118108  DT.100739852  DT.95185605 

    24/118 AceView cDNA sequences (see all 118):

    AI355618 BI856889 AA256264 CA487440 AW949385 AI418283 BX327490 BQ923202 
    AA830197 AF125950 AA948349 CA775709 AI220389 AA256360 W87356 AA331560 
    AI239991 AI142118 AA700287 U27516 AI912590 BQ068945 AW016336 AA292642 

    GeneLoc Exon Structure

    5/16 Alternative Splicing Database (ASD) splice patterns (SP) for RAD52 (see all 16)    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b · 4c · 4d · 4e ^ 5 ^ 6a · 6b · 6c · 6d ^ 7 ^ 8 ^ 9 ^ 10a · 10b · 10c · 10d ^ 11a · 11b · 11c ^
    SP1:                                -     -     -     -     -     -     -     -     -     -     -     -                       -     -     -           -     -   
    SP2:                                                                                                  -                       -     -     -                     
    SP3:                                                                                                  -                       -     -     -           -     -   
    SP4:                                                                                                  -                             -     -           -     -   
    SP5:                                                                                                                                                            

    ExUns: 12a · 12b ^ 13 ^ 14 ^ 15a · 15b · 15c · 15d ^ 16a · 16b ^ 17a · 17b ^ 18a · 18b
    SP1:        -                 -     -     -                 -                           
    SP2:                          -     -     -                                             
    SP3:        -                 -     -     -                 -                           
    SP4:        -                                               -                           
    SP5:        -                 -     -                       -                           


    ECgene alternative splicing isoforms for RAD52

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RAD52 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AAACAGAGTT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See RAD52 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RAD52

    SOURCE GeneReport for Unigene cluster: Hs.410355
        SABiosciences Expression via Pathway-Focused PCR Arrays including RAD52: 
              DNA Damage Signaling Pathway in human mouse rat
              DNA Repair in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RAD52
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat RAD52
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RAD52
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RAD52
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RAD52

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for RAD52 gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Rad521 , 5 RAD52 homolog (S. cerevisiae)1, 5 77.34(n)1
    72.17(a)1
      6 (56.86 cM)5
    193651  NM_001166381.11  NP_001159853.11 
     1199026985 
    chicken
    (Gallus gallus)
    Aves RAD521 RAD52 homolog (S. cerevisiae) 64.4(n)
    61.78(a)
      418152  NM_001167758.1  NP_001161230.1 
    lizard
    (Anolis carolinensis)
    Reptilia RAD526
    --
    82(a)
    1 ↔ 1
    5(12351838-12360427)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.204232 Transcribed sequence with moderate similarity to protein spP43351 (H.sapiens) RA52_HUMAN DNA repair protein RAD52 homolog less 80.39(n)    AL855367.2 
    zebrafish
    (Danio rerio)
    Actinopterygii rad521 RAD52 homolog (S. cerevisiae) 60.97(n)
    57.83(a)
      554171  NM_001024451.1  NP_001019622.1 


    ENSEMBL Gene Tree for RAD52 (if available)
    TreeFam Gene Tree for RAD52 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for RAD52 gene

    RAD52 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for RAD52
    PGOHUM00000240444


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/851 NCBI SNPs in RAD52 are shown (see all 851    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1048950571,2
    C,untested1022104(-) TTAAGC/TACTGT 1 -- ut310--------
    rs1048950711,2
    C,untested1040297(-) GGATTC/TGGAAG 1 -- int10--------
    rs1873910521,2
    --1020792(+) TATCTC/TAGGTT 5 -- ds50010--------
    rs619171721,2
    --1020971(+) ATCACC/TTGAGG 5 -- ds50010--------
    rs115714901,2
    C,F,--1021037(-) TAATTAATT/-  
            
    TTTGT
    5 -- ds50011Minor allele frequency- -:0.49NS 172
    rs1829987471,2
    --1021049(+) TCGGGC/TGTCGT 5 -- ds50010--------
    rs1874262461,2
    --1021052(+) GGCGTC/TGTGGT 5 -- ds50010--------
    rs1489762701,2
    --1021107(+) TTGCTA/TGAATC 5 -- ds50010--------
    rs1919601901,2
    --1021113(+) GAATCC/TTGGCA 5 -- ds50010--------
    rs1825274701,2
    --1021150(+) GCACCA/GCTGCA 1 -- ds50010--------

    HapMap Linkage Disequilibrium report for RAD52 (1021243 - 1100356 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for RAD52
         1 CNV: 101394
    Human Gene Mutation Database (HGMD): RAD52

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing RAD52
    DNA2.0 Custom Variant and Variant Library Synthesis for RAD52

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    RAD52 for disorders           About GeneDecksing

    OMIM gene information: 600392    OMIM disorders: --

    20/30 diseases for RAD52 (see all 30):    About MalaCards
    dna topoisomerase i    nijmegen breakage syndrome    acoustic neuroma    familial chronic lymphocytic leukemia
    chronic lymphocytic leukemia    neuroma    lymphocytic leukemia    breast cancer susceptibility
    bloom syndrome    breast-ovarian cancer    ovarian cancer    epithelial ovarian cancer
    werner syndrome    breast cancer    stomach cancer    prostate cancer, progression of
    multiple sclerosis    lung cancer    prostate cancer    pulmonary disease

    5 Novoseek disease relationships for RAD52 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    germ-line mutation 37.9 2 17405295 (1), 10463575 (1)
    breast cancer 10.1 7 10463575 (3), 17405295 (2), 12023982 (1)
    cancer 5.29 3 18449888 (1), 12883740 (1), 10463575 (1)
    ovarian cancer 0 10 12883740 (4), 15670896 (1)
    tumors 0 1 9353268 (1)

    Genetic Association Database (GAD): RAD52
    Human Genome Epidemiology (HuGE) Navigator: RAD52 (35 documents)

    Export disorders for RAD52 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RAD52 gene, integrated from 9 sources (see all 158):
    (articles sorted by number of sources associating them with RAD52)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The human and mouse homologs of the yeast RAD52 gene: cDNA cloning, sequence analysis, assignment to human chromosome 12p12.2-p13, and mRNA expression in mouse tissues. (PubMed id 7774919)1, 2, 3, 9 Shen Z.... Chen D.J. (1995)
    2. Regulation of ionizing radiation-induced Rad52 nuclear foci formation by c-Abl-mediated phosphorylation. (PubMed id 12379650)1, 2, 9 Kitao H. and Yuan Z.M. (2002)
    3. Rad52 gene mutations in breast/ovarian cancer families and sporadic ovarian carcinoma patients. (PubMed id 12883740)1, 4, 9 Tong D....Zeillinger R. (2003)
    4. Cloning of human and mouse genes homologous to RAD52, a yeast gene involved in DNA repair and recombination. (PubMed id 7526206)1, 2, 9 Muris D.F.... Pastink A. (1994)
    5. Structure of the single-strand annealing domain of human RAD52 protein. (PubMed id 12370410)1, 2, 9 Singleton M.R.... Wigley D.B. (2002)
    6. DNA repair synthesis facilitates RAD52-mediated second-end capture during DSB repair. (PubMed id 18313388)1, 3, 9 McIlwraith M.J. and West S.C. (2008)
    7. Variants in DNA double-strand break repair genes and breast cancer susceptibility. (PubMed id 12023982)1, 4, 9 Kuschel B....Dunning A. (2002)
    8. RAD52 Y415X truncation polymorphism and epithelial ovarian cancer risk in Australian women. (PubMed id 15670896)1, 4, 9 Kelemen L....Chenevix-Trench G. (2005)
    9. Genetic polymorphisms of selected DNA repair genes, estrogen and progesterone receptor status, and breast cancer risk. (PubMed id 15958648)1, 4 Lee K.M....Kang D. (2005)
    10. Effect of germ-line genetic variation on breast cancer survival in a population-based study. (PubMed id 12036913)1, 4 Goode E.L....Pharoah P.P. (2002)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5893 HGNC: 9824 AceView: RAD52 Ensembl:ENSG00000002016 euGenes: HUgn5893
    ECgene: RAD52 Kegg: 5893 H-InvDB: RAD52

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RAD52 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for RAD52 Genetics and Cytogenetics in Oncology and Haematology
    NIEHS-SNPshttp://egp.gs.washington.edu/data/rad52/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for RAD52 gene:
    Search GeneIP for patents involving RAD52

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for RAD52   OriGene shRNA RFP for RAD52  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RAD52   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RAD52  
     OriGene Protein Over-expression Lysate for RAD52   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for RAD52   OriGene 3'-UTR Clone for RAD52  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RAD52   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RAD52  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for RAD52   OriGene Custom Protein Services for RAD52  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat RAD52
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing RAD52
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RAD52
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RAD52
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RAD52
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RAD52
     GenScript Custom Purified and Recombinant Proteins Services for RAD52 GenScript cDNA clones with any tag delivered in your preferred vector for RAD52
     GenScript Custom Assay Services for RAD52 GenScript Custom Superior Antibodies Services for RAD52
     GenScript Custom overexpressing Cell Line Services for RAD52 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Antibodies & Assays for RAD52 

     Regulatory tfbs in RAD52 promoter
     Search Chromatin IP Primers for RAD52
     RT2 qPCR Primer Assay in human, mouse, rat RAD52
     GNC Network for RAD52
     SABiosciences PCR Arrays including human, mouse, rat RAD52
     Search Tocris compounds for RAD52
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     RAD52 antibodies
     Antibodies for RAD52
     See all of Abcam's Antibodies, Kits and Proteins for RAD52
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     RAD52 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for RAD52
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RAD52
     SwitchGear 3'UTR luciferase reporter plasmids for RAD52
     SwitchGear Promoter luciferase reporter plasmids for RAD52
     ThermoFisher Antibodies for RAD52
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RAD52
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      RAD52 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4