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Aliases for RAD21-AS1 Gene

Subcategory (RNA class) for RAD21-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for RAD21-AS1 Gene

  • RAD21 Antisense RNA 1 2 3
  • RAD21 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 8 Open Reading Frame 81 2
  • Non-Protein Coding RNA 255 2
  • NCRNA00255 3
  • C8orf81 3

External Ids for RAD21-AS1 Gene

ORGUL Members for RAD21-AS1 Gene

Previous Symbols for RAD21-AS1 Gene

  • C8orf81
  • NCRNA00255

Summaries for RAD21-AS1 Gene

GeneCards Summary for RAD21-AS1 Gene

RAD21-AS1 (RAD21 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAD21-AS1 Gene

Genomics for RAD21-AS1 Gene

Genomic Location for RAD21-AS1 Gene

Start:
116,874,424 bp from pter
End:
116,876,868 bp from pter
Size:
2,445 bases
Orientation:
Plus strand

Genomic View for RAD21-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RAD21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAD21-AS1 Gene

No data available for Regulatory Elements for RAD21-AS1 Gene

Proteins for RAD21-AS1 Gene

Post-translational modifications for RAD21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAD21-AS1 Gene

Domains for RAD21-AS1 Gene

Gene Families for RAD21-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with RAD21-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for RAD21-AS1 Gene

Function for RAD21-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RAD21-AS1 Gene

Localization for RAD21-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for RAD21-AS1 Gene

Pathways for RAD21-AS1 Gene

SuperPathways for RAD21-AS1 Gene

No Data Available

Interacting Proteins for RAD21-AS1 Gene

Gene Ontology (GO) - Biological Process for RAD21-AS1 Gene

None

No data available for Pathways by source for RAD21-AS1 Gene

Transcripts for RAD21-AS1 Gene

mRNA/cDNA for RAD21-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RAD21-AS1 Gene

RAD21 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RAD21-AS1 Gene

No ASD Table

Relevant External Links for RAD21-AS1 Gene

GeneLoc Exon Structure for
RAD21-AS1
ECgene alternative splicing isoforms for
RAD21-AS1

Expression for RAD21-AS1 Gene

mRNA expression in normal human tissues for RAD21-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for RAD21-AS1 Gene

This gene is overexpressed in Testis (9.2).

SOURCE GeneReport for Unigene cluster for RAD21-AS1 Gene Hs.706174

genes like me logo Genes that share expressions with RAD21-AS1: view

Orthologs for RAD21-AS1 Gene

Evolution for RAD21-AS1 Gene

ENSEMBL:
Gene Tree for RAD21-AS1 (if available)
TreeFam:
Gene Tree for RAD21-AS1 (if available)

No data available for Orthologs for RAD21-AS1 Gene

Paralogs for RAD21-AS1 Gene

No data available for Paralogs for RAD21-AS1 Gene

Variants for RAD21-AS1 Gene

Sequence variations from dbSNP and Humsavar for RAD21-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs2921778 -- 116,877,202(-) ATTAT(A/C/G)AGGTA downstream-variant-500B
rs2921779 -- 116,876,904(-) TTCTA(C/T)CTTCT downstream-variant-500B
rs75359173 -- 116,877,240(+) AATAA(A/T)AACGT downstream-variant-500B
rs113245650 -- 116,877,293(+) CATTT(G/T)AAAGT downstream-variant-500B
rs117739764 -- 116,876,995(+) AATAC(A/C)ATTAG downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for RAD21-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv831434 CNV Gain 17160897
nsv6359 CNV Insertion 18451855
dgv7871n71 CNV Loss 21882294

Relevant External Links for RAD21-AS1 Gene

HapMap Linkage Disequilibrium report
RAD21-AS1

Disorders for RAD21-AS1 Gene

No disorders were found for RAD21-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for RAD21-AS1 Gene

Publications for RAD21-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for RAD21-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RAD21-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for RAD21-AS1
    • Block miRNA regulation of RAD21-AS1 using miScript Target Protectors

    Sources for RAD21-AS1 Gene

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