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Aliases for RAD21-AS1 Gene

Subcategory (RNA class) for RAD21-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for RAD21-AS1 Gene

  • RAD21 Antisense RNA 1 2 3
  • RAD21 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 8 Open Reading Frame 81 2
  • Non-Protein Coding RNA 255 2
  • NCRNA00255 3
  • C8orf81 3

External Ids for RAD21-AS1 Gene

ORGUL Members for RAD21-AS1 Gene

Previous HGNC Symbols for RAD21-AS1 Gene

  • C8orf81
  • NCRNA00255

Previous GeneCards Identifiers for RAD21-AS1 Gene

  • GC08P117888

Summaries for RAD21-AS1 Gene

GeneCards Summary for RAD21-AS1 Gene

RAD21-AS1 (RAD21 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAD21-AS1 Gene

Genomics for RAD21-AS1 Gene

Genomic Location for RAD21-AS1 Gene

Start:
116,874,424 bp from pter
End:
116,876,868 bp from pter
Size:
2,445 bases
Orientation:
Plus strand

Genomic View for RAD21-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RAD21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAD21-AS1 Gene

No data available for Regulatory Elements for RAD21-AS1 Gene

Proteins for RAD21-AS1 Gene

Post-translational modifications for RAD21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAD21-AS1 Gene

Domains for RAD21-AS1 Gene

Gene Families for RAD21-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RAD21-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RAD21-AS1 Gene

Function for RAD21-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RAD21-AS1 Gene

Localization for RAD21-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RAD21-AS1 Gene

Pathways for RAD21-AS1 Gene

SuperPathways for RAD21-AS1 Gene

No Data Available

Interacting Proteins for RAD21-AS1 Gene

Gene Ontology (GO) - Biological Process for RAD21-AS1 Gene

None

No data available for Pathways by source for RAD21-AS1 Gene

Transcripts for RAD21-AS1 Gene

mRNA/cDNA for RAD21-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RAD21-AS1 Gene

RAD21 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate RAD21-AS1
    • Block miRNA regulation of RAD21-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for RAD21-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for RAD21-AS1 Gene

    No ASD Table

    Relevant External Links for RAD21-AS1 Gene

    GeneLoc Exon Structure for
    RAD21-AS1
    ECgene alternative splicing isoforms for
    RAD21-AS1

    Expression for RAD21-AS1 Gene

    mRNA expression in normal human tissues for RAD21-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for RAD21-AS1 Gene

    This gene is overexpressed in Testis (9.2).

    SOURCE GeneReport for Unigene cluster for RAD21-AS1 Gene Hs.706174

    genes like me logo Genes that share expressions with RAD21-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for RAD21-AS1 Gene

    Orthologs for RAD21-AS1 Gene

    Evolution for RAD21-AS1 Gene

    ENSEMBL:
    Gene Tree for RAD21-AS1 (if available)
    TreeFam:
    Gene Tree for RAD21-AS1 (if available)

    No data available for Orthologs for RAD21-AS1 Gene

    Paralogs for RAD21-AS1 Gene

    No data available for Paralogs for RAD21-AS1 Gene

    Variants for RAD21-AS1 Gene

    Sequence variations from dbSNP and Humsavar for RAD21-AS1 Gene

    SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
    rs2921778 -- 116,877,202(-) ATTAT(A/C/G)AGGTA downstream-variant-500B
    rs2921779 -- 116,876,904(-) TTCTA(C/T)CTTCT downstream-variant-500B
    rs75359173 -- 116,877,240(+) AATAA(A/T)AACGT downstream-variant-500B
    rs113245650 -- 116,877,293(+) CATTT(G/T)AAAGT downstream-variant-500B
    rs117739764 -- 116,876,995(+) AATAC(A/C)ATTAG downstream-variant-500B

    Structural Variations from Database of Genomic Variants (DGV) for RAD21-AS1 Gene

    Variant ID Type Subtype PubMed ID
    nsv831434 CNV Gain 17160897
    nsv6359 CNV Insertion 18451855
    dgv7871n71 CNV Loss 21882294

    Relevant External Links for RAD21-AS1 Gene

    HapMap Linkage Disequilibrium report
    RAD21-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RAD21-AS1 Gene

    Disorders for RAD21-AS1 Gene

    No disorders were found for RAD21-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for RAD21-AS1 Gene

    Publications for RAD21-AS1 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

    Products for RAD21-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate RAD21-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for RAD21-AS1
      • Block miRNA regulation of RAD21-AS1 using miScript Target Protectors

      Sources for RAD21-AS1 Gene

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