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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RAC2 Gene

protein-coding   GIFtS: 70
GCID: GC22M037621

ras-related C3 botulinum toxin substrate 2 (rho family,...

 Explore 25 diseases affiliated with
RAC2 via our new
 Human Malady Compendium 
Biological research products
for RAC2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ras-Related C3 Botulinum Toxin Substrate 2 (Rho Family, Small GTP Binding
Protein Rac2)1 2
     HSPC0222
EN-71 2     Ras-Related C3 Botulinum Toxin Substrate 22
Small G Protein2 3     Ras-Related C3 Botulinum Toxin Substrate 3 (Rho Family, Small GTP-Binding
Protein Rac2)2
P21-Rac21     Rho Family, Small GTP Binding Protein Rac22
Gx2     GX3

External Ids:    HGNC: 98021   Entrez Gene: 58802   Ensembl: ENSG000001283407   OMIM: 6020495   UniProtKB: P151533   

Export aliases for RAC2 gene to outside databases

Previous GC identifers: GC22M034235 GC22M035864 GC22M035945 GC22M020586


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for RAC2:
The protein encoded by this gene is a GTPase which belongs to the RAS superfamily of small GTP-binding proteins.
Members of this superfamily appear to regulate a diverse array of cellular events, including the control of cell
growth, cytoskeletal reorganization, and the activation of protein kinases. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: RAC2_HUMAN, P15153
Function: Plasma membrane-associated small GTPase which cycles between an active GTP-bound and inactive GDP-bound
state. In active state binds to a variety of effector proteins to regulate cellular responses, such as secretory
processes, phagocytose of apoptotic cells and epithelial cell polarization. Augments the production of reactive oxygen
species (ROS) by NADPH oxidase

summary for RAC2:
Small G proteins (small GTPases) are homologous to Galpha proteins and are often referred to as the Ras
proto-oncogene superfamily. The Ras superfamily contains over 100 small GTPases grouped into eight families;
Ras, Rho, Rab, Rap, Arf, Ran, Rheb and Rad. Small GTPases regulate a wide variety of processes in the cell,
including growth, differentiation, movement and lipid vesicle transport. Like Galpha proteins, small GTPases
alternate between an 'on' state (bound to GTP) and an 'off' state (bound to GDP). This cyclic process
requires guanine nucleotide exchange factor (GEF) and GTPase-activating protein (GAP). Small GTPases are the
downstream effectors of most receptor tyrosine kinases (RTKs) and are linked via two proteins, GRB2 and SOS.
They are coupled to intracellular signaling cascades including the MAPK pathway, through interactions with
Raf kinase. Normally, activation of small GTPases is induced by ligand binding to a RTK. In many transformed
cells activating mutations of GTPases, often Ras, produce a cellular response in the absence of a ligand,
thus promoting malignant progression.

Gene Wiki entry for RAC2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000022.10  NC_018933.1  NT_011520.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RAC2 gene promoter:
         FAC1   AML1a   AP-1   ATF-2   Hand1   STAT3   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidRAC2 promoter sequence
   Search SABiosciences Chromatin IP Primers for RAC2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RAC2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 22q13.1   Ensembl cytogenetic band:  22q13.1   HGNC cytogenetic band: 22q13.1

RAC2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RAC2 gene location

GeneLoc information about chromosome 22         GeneLoc Exon Structure

GeneLoc location for GC22M037621:  view genomic region     (about GC identifiers)

Start:
37,621,301 bp from pter      End:
37,640,488 bp from pter
Size:
19,188 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RAC2_HUMAN, P15153 (See protein sequence)
Recommended Name: Ras-related C3 botulinum toxin substrate 2 precursor  
Size: 192 amino acids; 21429 Da
Subunit: Interacts with DOCK2, which may activate it. Interacts with S100A8 and calprotectin (S100A8/9)
Subcellular location: Cytoplasm. Note=Membrane-associated when activated
4 PDB 3D structures from and Proteopedia for RAC2:
1DS6 (3D)        2W2T (3D)        2W2V (3D)        2W2X (3D)    
Secondary accessions: Q9UDJ4

Explore the universe of human proteins at neXtProt for RAC2: NX_P15153

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P15153

  • RAC2 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_002863.1  
    ENSEMBL proteins: 
     ENSP00000249071   ENSP00000385270   ENSP00000385590   ENSP00000403778   ENSP00000385666  
    Reactome Protein details: P15153
    Human Recombinant Protein Products: 
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    Novus Biologicals RAC2 Lysate
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    ProSpec Recombinant Protein for RAC2
    Browse Proteins at Uscn

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular ----
    GO:0005624membrane fraction ----
    GO:0005635nuclear envelope IEA--
    GO:0005737cytoplasm ----
    GO:0005829cytosol TAS--


    RAC2 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    RAC2 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR003578 Small_GTPase_Rho
     IPR005225 Small_GTP-bd_dom
     IPR001806 Small_GTPase

    Graphical View of Domain Structure for InterPro Entry P15153

    ProtoNet protein and cluster: P15153

    2 Blocks protein families:
    IPB001806 Transforming protein P21 RAS signature
    IPB003578 Ras small GTPase


    UniProtKB/Swiss-Prot: RAC2_HUMAN, P15153
    Similarity: Belongs to the small GTPase superfamily. Rho family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: RAC2_HUMAN, P15153
    Function: Plasma membrane-associated small GTPase which cycles between an active GTP-bound and inactive GDP-bound
    state. In active state binds to a variety of effector proteins to regulate cellular responses, such as secretory
    processes, phagocytose of apoptotic cells and epithelial cell polarization. Augments the production of reactive oxygen
    species (ROS) by NADPH oxidase
    Enzyme regulation: Regulated by guanine nucleotide exchange factors (GEFs) which promote the exchange of bound GDP for
    free GTP, GTPase activating proteins (GAPs) which increase the GTP hydrolysis activity, and GDP dissociation
    inhibitors which inhibit the dissociation of the nucleotide from the GTPase

         Genatlas biochemistry entry for RAC2:
    ras-related C3 botulinism toxin substrate 2,Ras-like protein,member of the Rho family of GTPase,specifically expressed
    in hemopoietic lineage,involved in the production of superoxide in neutrophils,putative regulator of mitogen-induced
    cytoskeletal changes essential for membrane ruffling,and C-jun aminoterminal kinase JNK,key downstream target in Ras
    signaling putatively mediated by EPS58 and SSH3BP1

    miRNA
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    hsa-miR-1184 hsa-miR-378* hsa-miR-1205
    SwitchGear 3'UTR luciferase reporter plasmidRAC2 3' UTR sequence
    Inhib. RNA
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    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003924GTPase activity IEA--
    GO:0005525GTP binding IEA--


    RAC2 for ontologies           About GeneDecksing


    4 GenomeRNAi human phenotypes for RAC2:
     Altered focal adhesion (FA) or  Cell cycle / mitosis defect  Increased cell death HMECs cel  Upregulation of Wnt/beta-caten 

    Animal Models:
         Mouse knock-out Rac2tm1Mddw for RAC2
         6 MGI mutant phenotypes (inferred from 1 allele(MGI details for Rac2):
     cardiovascular system  cellular  hematopoietic system  homeostasis/metabolism  immune system 
     mortality/aging 

    RAC2 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/60 super-pathways (see all 60About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1PKC-Theta Pathway
    PKC-Theta Pathway1.00
    ITK and TCR Signaling0.54
    TCR Signaling0.68
    Fc-EpsilonRI Pathway0.42
    2Integrin Pathway
    Integrin Pathway1.00
    GnRH Signaling0.56
    FAK1 Signaling0.67
    Transendothelial Migration of Leukocytes0.38
    3GPCR Pathway
    GPCR Pathway1.00
    Breast Cancer Regulation by Stathmin10.58
    Ras Pathway0.62
    Pancreatic Adenocarcinoma0.55
    4CCR3 Pathway in Eosinophils
    CCR3 Pathway in Eosinophils1.00
    CXCR4 Pathway0.39
    fMLP Pathway0.43
    Internalin Pathway0.19
    5Immune response _CCR3 signaling in eosinophils
    Immune response _CCR3 signaling in eosinophils1.00
    Inhibitory action of Lipoxins on neutrophil migration0.51
    Immune response CCR3 signaling in eosinophils1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 EMD Millipore Pathways for RAC2
        G-protein signaling Rac2 regulation pathway
    Immune response CCR3 signaling in eosinophils

    1 R&D Systems Pathway for RAC2
        Wnt Signaling Pathway

    5/51 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for RAC2 (see all 51)
        Fc-GammaR Pathway
    Molecular Mechanisms of Cancer
    Antioxidant Action of Vitamin-C
    G12-G13 in Cellular Signaling
    TRKA Signaling

    2 Cell Signaling Technology (CST) Pathways for RAC2
        MAP Kinase Signaling
    Cytoskeletal Signaling

    4 GeneGo (Thomson Reuters) Pathways for RAC2
        G-protein signaling Rac2 regulation pathway
    Inhibitory action of Lipoxins on Superoxide production in neutrophils
    Inhibitory action of Lipoxins on neutrophil migration
    Immune response CCR3 signaling in eosinophils

    5/8 BioSystems Pathways for RAC2 (see all 8
        Focal Adhesion
    DNA damage response (only ATM dependent)
    MAPK signaling pathway
    RalA downstream regulated genes
    Integrin-mediated cell adhesion

    5/14        Reactome Pathways for RAC2 (see all 14)
        GPCR downstream signaling
    Hemostasis
    Signaling by Rho GTPases
    Developmental Biology
    G alpha (12/13) signalling events

    2 PharmGKB Pathways for RAC2
        Bisphosphonate Pathway, Pharmacodynamics
    Doxorubicin Pathway (Cardiomyocyte Cell), Pharmacodynamics

    5/17         Kegg Pathways  (Kegg details for RAC2) (see all 17):
        MAPK signaling pathway
    Chemokine signaling pathway
    Wnt signaling pathway
    Axon guidance
    VEGF signaling pathway


    RAC2 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for RAC2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/164 Interacting proteins for RAC2 (P151532, 3 ENSP000002490714) via UniProtKB, MINT, STRING, and/or I2D (see all 164)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CHGBP050602, 3, ENSP000003682444MINT-8267918 I2D: score=2 STRING: ENSP00000368244
    ARHGDIBP525662, 3, ENSP000002289454MINT-16596 MINT-24949 I2D: score=5 STRING: ENSP00000228945
    AFG3L2Q9Y4W62, 3, ENSP000002691434MINT-8267907 I2D: score=2 STRING: ENSP00000269143
    NCF2P198783, ENSP000003565054I2D: score=4 STRING: ENSP00000356505
    NOS2P352283, ENSP000003272514I2D: score=4 STRING: ENSP00000327251
    About this table

    Gene Ontology (GO): 5/14 biological process terms (GO ID links to tree view) (see all 14):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006184GTP catabolic process ----
    GO:0006935chemotaxis ----
    GO:0007165signal transduction TAS2674130
    GO:0007264small GTPase mediated signal transduction TAS--
    GO:0007411axon guidance TAS--


    RAC2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    RAC2 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for RAC2 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    EHT 1864Potent inhibitor of Rac family GTPases--

    4 HMDB Compounds for RAC2    About this table
    CompoundSynonyms CAS #PubMed Ids
    Guanosine diphosphate5'-GDP (see all 10)146-91-8--
    Guanosine monophosphate5'-GMP (see all 14)85-32-5--
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--
    NADPH2'-(dihydrogen phosphate) 5'-(trihydrogen pyrophosphate) Adenosine 5'-ester with 1,4-dihydro-1-b-D-ribofuranosylnicotinamide (see all 23)53-57-6--
    10/15 Novoseek chemical compound relationships for RAC2 gene (see all 15)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    nadph 80.9 43 12471136 (3), 15981461 (2), 14660749 (2), 8670049 (2) (see all 32)
    fmlp 64 13 12391220 (2), 10364257 (2), 8670049 (2), 17060455 (1) (see all 6)
    superoxide 61.9 21 15504745 (3), 1328203 (2), 12471136 (2), 19534724 (2) (see all 14)
    guanosine 58.5 3 10779444 (1), 16582540 (1), 15170212 (1)
    gtp 58.3 9 9748241 (2), 8305740 (2), 8089125 (1), 7479768 (1) (see all 5)
    n-formylmethionyl-leucylphenylalanine 43.4 2 10364257 (1)
    oxygen 36.3 6 9343750 (1), 16820949 (1), 10540223 (1), 8670049 (1) (see all 6)
    tyrosine 29.6 4 15944312 (2), 14550529 (1), 7616102 (1)
    phorbol 26.3 1 15504745 (1)
    asparagine 14.2 1 14676277 (1)

    1 PharmGKB related drug/compound annotation for RAC2 gene
    Drug/compound PharmGKB Annotation
    doxorubicinCA  
    About this table

    Search CenterWatch for drugs/clinical trials and news about RAC2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for RAC2 gene: 
    NM_002872.3  

    Unigene Cluster for RAC2:

    Ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)
    Hs.517601  [show with all ESTs]
    Unigene Representative Sequence: AK096924
    7 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000249071(uc003arc.3) ENST00000406508 ENST00000481215 ENST00000405484
    ENST00000441619 ENST00000469532 ENST00000401529

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    Additional cDNA sequence: 

    AF077208.1 AF498965.1 AK096924.1 BC001485.2 BC018735.1 BC051899.1 BT006919.1 CR456555.1 
    M29871.1 

    12 DOTS entries:

    DT.416967  DT.100827641  DT.100716835  DT.99930448  DT.100827645  DT.91846232  DT.100827643  DT.100827650 
    DT.100827653  DT.416969  DT.92445198  DT.92445205 

    24/341 AceView cDNA sequences (see all 341):

    BC018735 AJ714515 BM820881 CR608461 BM552059 AA829948 CR616302 AA768493 
    BQ934070 BM851882 BI908639 AA310079 BM851955 BG106565 CR615260 BQ059790 
    AA641662 BI906866 BI261649 BM849925 BM458676 BI020972 BM820025 BE616329 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for RAC2    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8
    SP1:                                -           -                           
    SP2:                    -           -           -                           
    SP3:                                -                                       
    SP4:                                                                        


    ECgene alternative splicing isoforms for RAC2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RAC2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TGGAAGCATC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    RAC2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LiverLiver BudLiver
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 6 LifeMap Cells 
    NameCategory
    PureStem™ endothelial progenitor 30-SM2-1 (Embryonic Progenitor Cell)Endothelium
    PureStem™ endothelial progenitor RP1-MV2-18 (Embryonic Progenitor Cell)Endothelium
    PureStem™ mesenchymal progenitor 7PEND24 (Embryonic Progenitor Cell)Cartilage, Neural Crest
    PureStem™ progenitor EN2 (Embryonic Progenitor Cell)
    PureStem™ progenitor EN27 (Embryonic Progenitor Cell)
    PureStem™ progenitor EN7 (Embryonic Progenitor Cell)

    See RAC2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RAC2

    SOURCE GeneReport for Unigene cluster: Hs.517601

    UniProtKB/Swiss-Prot: RAC2_HUMAN, P15153
    Tissue specificity: Hematopoietic specific

        SABiosciences Expression via Pathway-Focused PCR Arrays including RAC2: 
              Adherens Junctions in human mouse rat
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              Cell Motility in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for RAC2 gene from 8/29 species (see all 29)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves RAC21 ras-related C3 botulinum toxin substrate 2 (rho family, more 83.51(n)
    98.44(a)
      418044  NM_001201452.1  NP_001188381.1 
    lizard
    (Anolis carolinensis)
    Reptilia RAC26
    --
    96(a)
    1 ↔ 1
    5(22873979-22888339)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.153832 Transcribed sequence with strong similarity to protein more 79.72(n)    BX702895.1 
    zebrafish
    (Danio rerio)
    Actinopterygii rac21 ras-related C3 botulinum toxin substrate 2 (rho family, more 79.17(n)
    93.75(a)
      415151  NM_001002061.1  NP_001002061.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Rac13 cell proliferation GTPase 89(a)
    (best of 4)
      3 61F5   --
    worm
    (Caenorhabditis elegans)
    Secernentea ced-103 RAS-related protein 95(a)
    (best of 4)
      IV(3507381-3509495)   --
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons RAC101 Rac-like GTP-binding protein ARAC10 58.2(n)
    60.77(a)
      836408  NM_125682.4  NP_201093.1 
    rice
    (Oryza sativa)
    Liliopsida Os.55052 Oryza sativa mRNA for small GTP-binding protein OsRac3, more 73.03(n)    AB029510.1 


    ENSEMBL Gene Tree for RAC2 (if available)
    TreeFam Gene Tree for RAC2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for RAC2 gene
    RHOBTB22  RHOH2  RHOQ2  RAC12  RHOBTB12  RHOV2  CDC422  RHOJ2  
    RHOG2  RHOU2  RAC32  
    18/53 SIMAP similar genes for RAC2 using alignment to 5 protein entries:     RAC2_HUMAN (see all proteins) (see all similar genes):
    RAC3    RAC1    CDC42    RHOJ    ARHG    RHOG
    RHOQ    RHOV    RHOF    RHOU    RHOD    RHOH
    RHOA    RHOC    RHOB    RND2    ARHE    RND3

    RAC2 for paralogs           About GeneDecksing


    5/6 Pseudogenes.org Pseudogenes for RAC2 (see all 6)
    PGOHUM00000248381 PGOHUM00000258726 PGOHUM00000245512 PGOHUM00000245647 PGOHUM00000243694


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/515 NCBI SNPs in RAC2 are shown (see all 515    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 22 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs743155071,2
    Cpathogenic37628897(-) TGTGGA/GACACT 2 N D mis10--------
    rs562111451,2
    C,--20585826(-) GAAATA/GAAACA 1 -- ds50010--------
    rs559649141,2
    C,--20585848(-) GGAAAG/TTGTTC 1 -- ds50012Minor allele frequency- T:0.04WA 120
    rs130541431,2
    C,--37620868(+) TTCCCG/ACCAGG 1 -- ds50013Minor allele frequency- A:0.07NA EA 242
    rs560345611,2
    C,--37620905(-) ACTGGA/GGGGGA 1 -- ds50010--------
    rs59954001,2
    C,A,H,--37620917(+) CACACA/GCTTTC 1 -- ds50018Minor allele frequency- G:0.23NA WA CSA EA 367
    rs59954011,2
    C,A,H,--37620935(+) TTGCCA/GCAGTT 1 -- ds50018Minor allele frequency- G:0.23NA WA CSA EA 367
    rs72886841,2
    C,H,--37621109(+) CTGAAC/GTTGAA 1 -- ds50017Minor allele frequency- G:0.05EA NS NA CSA 516
    rs783536591,2
    --37621119(+) ACTTGG/TAAGGA 1 -- ds50010--------
    rs1391045751,2
    C,--37621130(+) TGAGG-/CCCTGAACTTGAA
    CTTGGAAGGATGAAA
    CCCTG
    1 -- ds50010--------

    HapMap Linkage Disequilibrium report for RAC2 (37621301 - 37640488 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for RAC2: --
    Human Gene Mutation Database (HGMD): RAC2

    Locus Specific Mutation Databases (LSDB): RAC2

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    RAC2 for disorders           About GeneDecksing

    OMIM gene information: 602049   
    OMIM disorders: 608203  
    UniProtKB/Swiss-Prot: RAC2_HUMAN, P15153
  • Defects in RAC2 are the cause of neutrophil immunodeficiency syndrome (NEUID) [MIM:608203]

  • 20/25 diseases for RAC2 (see all 25):    About MalaCards
    severe congenital neutropenia    non-hodgkin lymphoma    neutrophil immunodeficiency syndrome    systemic mastocytosis
    mastocytosis    hodgkin's lymphoma    megakaryoblastic leukemia    acute myeloid leukemia
    neutropenia    myeloid leukemia    parkinson's disease    fibrosarcoma
    immunodeficiency    pertussis    leukemia    meningioma
    pancreatic cancer    colorectal cancer    prostate cancer    pancreatitis

    7 Novoseek disease relationships for RAC2 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    granulomatous disease chronic 43.5 1 8670049 (1)
    tumors 1 1 16491116 (1)
    bacterial infections 0 1 14676277 (1)
    inflammation 0 1 17975262 (1)
    gastric cancer 0 1 14975755 (1)
    metastasis 0 1 16491116 (1)
    immunodeficiency 0 4 10758162 (1), 11278678 (1), 10961859 (1), 12468931 (1)

    Genetic Association Database (GAD): RAC2
    Human Genome Epidemiology (HuGE) Navigator: RAC2 (14 documents)

    Export disorders for RAC2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RAC2 gene, integrated from 9 sources (see all 194):
    (articles sorted by number of sources associating them with RAC2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Human neutrophil immunodeficiency syndrome is associated with an inhibitory Rac2 mutation. (PubMed id 10758162)1, 2, 4, 9 Ambruso D.R.... Roos D. (2000)
    2. Rac, a novel ras-related family of proteins that are botulinum toxin substrates. (PubMed id 2674130)1, 2, 3 Didsbury J.... Snyderman R. (1989)
    3. Carboxyl-terminal isoprenylation of ras-related GTP-binding proteins encoded by rac1, rac2, and ralA. (PubMed id 1903399)1, 2, 9 Kinsella B.T.... Maltese W.A. (1991)
    4. Regulation of the human neutrophil NADPH oxidase by rho-related G- proteins. (PubMed id 8504089)1, 2, 9 Kwong C.H.... Leto T.L. (1993)
    5. A genome annotation-driven approach to cloning the human ORFeome. (PubMed id 15461802)1, 2 Collins J.E.... Dunham I. (2004)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. The Rac-RhoGDI complex and the structural basis for the regulation of Rho proteins by RhoGDI. (PubMed id 10655614)1, 2 Scheffzek K.... Gierschik P. (2000)
    8. The DNA sequence of human chromosome 22. (PubMed id 10591208)1, 2 Dunham I....O'Brien K.P. (1999)
    9. Non-adherent cell-specific expression of DOCK2, a member of the human CDM-family proteins. (PubMed id 10559471)1, 2 Nishihara H.... Matsuda M. (1999)
    10. Regulation of the superoxide-generating NADPH oxidase by a small GTP- binding protein and its stimulatory and inhibitory GDP/GTP exchange proteins. (PubMed id 1316893)1, 2 Mizuno T.... Takai Y. (1992)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5880 HGNC: 9802 AceView: RAC2 Ensembl:ENSG00000128340 euGenes: HUgn5880
    ECgene: RAC2 Kegg: 5880 H-InvDB: RAC2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RAC2 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for RAC2 Genetics and Cytogenetics in Oncology and Haematology
    RAC2basehttp://bioinf.uta.fi/RAC2base/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for RAC2 gene:
    Search GeneIP for patents involving RAC2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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