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Aliases for RABGAP1L-IT1 Gene

Subcategory (RNA class) for RABGAP1L-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RABGAP1L-IT1 Gene

  • RABGAP1L Intronic Transcript 1 2 3 5
  • RABGAP1L Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for RABGAP1L-IT1 Gene

Previous GeneCards Identifiers for RABGAP1L-IT1 Gene

  • GC00U933177

Summaries for RABGAP1L-IT1 Gene

GeneCards Summary for RABGAP1L-IT1 Gene

RABGAP1L-IT1 (RABGAP1L Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RABGAP1L-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RABGAP1L-IT1 Gene

Genomics for RABGAP1L-IT1 Gene

GeneHancer (GH) Regulatory Elements for RABGAP1L-IT1 Gene

Promoters and enhancers for RABGAP1L-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I174898 Enhancer 0.3 ENCODE 550.8 +1.6 1621 0.2 HNF1A RABGAP1L-IT1 RPS26P12 RABGAP1L
GH01I174897 Enhancer 0.3 ENCODE 550.8 +1.0 1041 0.8 HNF1A RABGAP1L-IT1 RABGAP1L RPS26P12
GH01I174893 Enhancer 0.2 ENCODE 0.8 -2.6 -2553 1.8 ENSG00000237249 RABGAP1L-IT1 RABGAP1L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RABGAP1L-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RABGAP1L-IT1 Gene

Genomic Locations for RABGAP1L-IT1 Gene
chr1:174,896,958-174,897,996
(GRCh38/hg38)
Size:
1,039 bases
Orientation:
Plus strand
chr1:174,866,095-174,867,133
(GRCh37/hg19)

Genomic View for RABGAP1L-IT1 Gene

Genes around RABGAP1L-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RABGAP1L-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RABGAP1L-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RABGAP1L-IT1 Gene

Proteins for RABGAP1L-IT1 Gene

Post-translational modifications for RABGAP1L-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RABGAP1L-IT1 Gene

Domains & Families for RABGAP1L-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RABGAP1L-IT1 Gene

Function for RABGAP1L-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RABGAP1L-IT1 Gene

Localization for RABGAP1L-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RABGAP1L-IT1 Gene

Pathways & Interactions for RABGAP1L-IT1 Gene

SuperPathways for RABGAP1L-IT1 Gene

No Data Available

Interacting Proteins for RABGAP1L-IT1 Gene

Gene Ontology (GO) - Biological Process for RABGAP1L-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RABGAP1L-IT1 Gene

Drugs & Compounds for RABGAP1L-IT1 Gene

No Compound Related Data Available

Transcripts for RABGAP1L-IT1 Gene

mRNA/cDNA for RABGAP1L-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RABGAP1L-IT1 Gene

No ASD Table

Relevant External Links for RABGAP1L-IT1 Gene

GeneLoc Exon Structure for
RABGAP1L-IT1
ECgene alternative splicing isoforms for
RABGAP1L-IT1

Expression for RABGAP1L-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RABGAP1L-IT1 Gene

genes like me logo Genes that share expression patterns with RABGAP1L-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RABGAP1L-IT1 Gene

Orthologs for RABGAP1L-IT1 Gene

Evolution for RABGAP1L-IT1 Gene

ENSEMBL:
Gene Tree for RABGAP1L-IT1 (if available)
TreeFam:
Gene Tree for RABGAP1L-IT1 (if available)

No data available for Orthologs for RABGAP1L-IT1 Gene

Paralogs for RABGAP1L-IT1 Gene

No data available for Paralogs for RABGAP1L-IT1 Gene

Variants for RABGAP1L-IT1 Gene

Additional Variant Information for RABGAP1L-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RABGAP1L-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RABGAP1L-IT1 Gene

Disorders for RABGAP1L-IT1 Gene

No disorders were found for RABGAP1L-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RABGAP1L-IT1 Gene

Publications for RABGAP1L-IT1 Gene

No publications were found for RABGAP1L-IT1 Gene.

Products for RABGAP1L-IT1 Gene

Sources for RABGAP1L-IT1 Gene

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