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Aliases for RABEPKP1 Gene

Subcategory (RNA class) for RABEPKP1 Gene

lncRNA

Aliases for RABEPKP1 Gene

  • Rab9 Effector Protein With Kelch Motifs Pseudogene 1 2 3 5

External Ids for RABEPKP1 Gene

ORGUL Members for RABEPKP1 Gene

Previous GeneCards Identifiers for RABEPKP1 Gene

  • GC13P071872

Summaries for RABEPKP1 Gene

GeneCards Summary for RABEPKP1 Gene

RABEPKP1 (Rab9 Effector Protein With Kelch Motifs Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RABEPKP1 Gene

Genomics for RABEPKP1 Gene

Regulatory Elements for RABEPKP1 Gene

Enhancers for RABEPKP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G071290 1.6 FANTOM5 Ensembl ENCODE 0.7 -4.9 -4856 2.1 PKNOX1 FOXA2 DMAP1 GLIS2 FOS ZNF263 NFYC JUNB KAT8 ZNF585B RABEPKP1 GC13P071019 PIR47537 GC13P071018
GH13G071219 1.6 VISTA 0.2 -76.0 -75964 1.9 ZNF263 CTCF PKNOX1 GLIS1 WT1 RAD21 RABEPKP1 GC13P071018 PIR47537 GC13P071019
GH13G071200 1.7 VISTA 0.1 -95.2 -95234 0.5 ZNF121 ZNF384 RABEPKP1 GC13P071018 PIR47537 GC13P071019
GH13G071260 0.5 ENCODE 0.3 -35.1 -35084 1.2 CTBP1 NFIB JUN FOXA1 RABEPKP1 GC13P071018 GC13P071019 PIR47537
GH13G071275 0.4 Ensembl 0.3 -20.9 -20910 0.2 TBX21 SPI1 RABEPKP1 GC13P071018 GC13P071019 PIR47537
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RABEPKP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RABEPKP1 Gene

Chromosome:
13
Start:
71,296,210 bp from pter
End:
71,297,235 bp from pter
Size:
1,026 bases
Orientation:
Plus strand

Genomic View for RABEPKP1 Gene

Genes around RABEPKP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RABEPKP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RABEPKP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RABEPKP1 Gene

Proteins for RABEPKP1 Gene

Post-translational modifications for RABEPKP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RABEPKP1 Gene

Domains & Families for RABEPKP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RABEPKP1 Gene

Function for RABEPKP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RABEPKP1 Gene

Localization for RABEPKP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RABEPKP1 Gene

Pathways & Interactions for RABEPKP1 Gene

SuperPathways for RABEPKP1 Gene

No Data Available

Interacting Proteins for RABEPKP1 Gene

Gene Ontology (GO) - Biological Process for RABEPKP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RABEPKP1 Gene

Drugs & Compounds for RABEPKP1 Gene

No Compound Related Data Available

Transcripts for RABEPKP1 Gene

mRNA/cDNA for RABEPKP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RABEPKP1 Gene

No ASD Table

Relevant External Links for RABEPKP1 Gene

GeneLoc Exon Structure for
RABEPKP1
ECgene alternative splicing isoforms for
RABEPKP1

Expression for RABEPKP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RABEPKP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RABEPKP1 Gene:

RABEPKP1
genes like me logo Genes that share expression patterns with RABEPKP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RABEPKP1 Gene

Orthologs for RABEPKP1 Gene

Evolution for RABEPKP1 Gene

ENSEMBL:
Gene Tree for RABEPKP1 (if available)
TreeFam:
Gene Tree for RABEPKP1 (if available)

No data available for Orthologs for RABEPKP1 Gene

Paralogs for RABEPKP1 Gene

No data available for Paralogs for RABEPKP1 Gene

Variants for RABEPKP1 Gene

Relevant External Links for RABEPKP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RABEPKP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RABEPKP1 Gene

Disorders for RABEPKP1 Gene

No disorders were found for RABEPKP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RABEPKP1 Gene

Publications for RABEPKP1 Gene

No publications were found for RABEPKP1 Gene.

Products for RABEPKP1 Gene

Sources for RABEPKP1 Gene

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