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Aliases for RAB9BP1 Gene

Subcategory (RNA class) for RAB9BP1 Gene


Aliases for RAB9BP1 Gene

  • RAB9B, Member RAS Oncogene Family Pseudogene 1 2 3 5
  • RAB9, Member RAS Oncogene Family, Pseudogene 1 2 3
  • RAB9A, Member RAS Oncogene Family Pseudogene 3
  • RAB9P1 3

External Ids for RAB9BP1 Gene

ORGUL Members for RAB9BP1 Gene

Previous HGNC Symbols for RAB9BP1 Gene

  • RAB9P1

Previous GeneCards Identifiers for RAB9BP1 Gene

  • GC05P104435
  • GC05P099612

Summaries for RAB9BP1 Gene

GeneCards Summary for RAB9BP1 Gene

RAB9BP1 (RAB9B, Member RAS Oncogene Family Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RAB9BP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAB9BP1 Gene

Genomics for RAB9BP1 Gene

Regulatory Elements for RAB9BP1 Gene

Enhancers for RAB9BP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H104942 0.7 ENCODE 0.1 -156.5 -156539 0.2 PKNOX1 CEBPB FEZF1 DPF2 EP300 ATF2 ZNF217 GATA3 STAT3 CUX1 GC05P104914 RAB9BP1
GH05H104986 0.4 ENCODE 0.1 -112.9 -112919 0.2 FOXA1 GC05P104914 RAB9BP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RAB9BP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RAB9BP1 Gene

Genomic Locations for RAB9BP1 Gene
626 bases
Plus strand

Genomic View for RAB9BP1 Gene

Genes around RAB9BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RAB9BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RAB9BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAB9BP1 Gene

Proteins for RAB9BP1 Gene

Post-translational modifications for RAB9BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAB9BP1 Gene

Domains & Families for RAB9BP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RAB9BP1 Gene

Function for RAB9BP1 Gene

Phenotypes From GWAS Catalog for RAB9BP1 Gene

Phenotypes for RAB9BP1 Gene

GenomeRNAi human phenotypes for RAB9BP1:
genes like me logo Genes that share phenotypes with RAB9BP1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RAB9BP1 Gene

Localization for RAB9BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RAB9BP1 Gene

Pathways & Interactions for RAB9BP1 Gene

SuperPathways for RAB9BP1 Gene

No Data Available

Interacting Proteins for RAB9BP1 Gene

Gene Ontology (GO) - Biological Process for RAB9BP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RAB9BP1 Gene

Drugs & Compounds for RAB9BP1 Gene

No Compound Related Data Available

Transcripts for RAB9BP1 Gene

mRNA/cDNA for RAB9BP1 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RAB9BP1 Gene

No ASD Table

Relevant External Links for RAB9BP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RAB9BP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RAB9BP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RAB9BP1 Gene:


SOURCE GeneReport for Unigene cluster for RAB9BP1 Gene:

genes like me logo Genes that share expression patterns with RAB9BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RAB9BP1 Gene

Orthologs for RAB9BP1 Gene

Evolution for RAB9BP1 Gene

Gene Tree for RAB9BP1 (if available)
Gene Tree for RAB9BP1 (if available)

No data available for Orthologs for RAB9BP1 Gene

Paralogs for RAB9BP1 Gene

No data available for Paralogs for RAB9BP1 Gene

Variants for RAB9BP1 Gene

Sequence variations from dbSNP and Humsavar for RAB9BP1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1000955731 -- 105,098,988(+) GGTAT(A/G)TGTCC upstream-variant-2KB
rs1001245537 -- 105,099,375(+) GATGG(A/T)ATACT upstream-variant-2KB
rs1001319205 -- 105,099,136(+) GTTCT(G/T)GCAAG upstream-variant-2KB
rs1001929986 -- 105,100,547(+) AGTAT(G/T)AGATA downstream-variant-500B
rs1002372597 -- 105,100,224(+) ATGTA(G/T)AGTGC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for RAB9BP1 Gene

Variant ID Type Subtype PubMed ID
nsv818371 CNV loss 17921354
nsv599231 CNV loss 21841781
nsv599230 CNV loss 21841781
nsv599216 CNV gain 21841781
nsv599214 CNV loss 21841781
nsv517325 CNV loss 19592680
nsv499711 CNV loss 21111241
nsv4944 CNV deletion 18451855
nsv471032 CNV gain 18288195
nsv471031 CNV loss 18288195
nsv469797 CNV gain 16826518
nsv433231 CNV loss 18776910
nsv428122 CNV gain 18775914
nsv10737 CNV loss 18304495
nsv1028408 CNV loss 25217958
nsv1027994 CNV gain 25217958
nsv1027333 CNV gain+loss 25217958
nsv1023731 CNV loss 25217958
nsv1022638 CNV gain 25217958
nsv1020195 CNV loss 25217958
esv3890698 CNV loss 25118596
esv3606139 CNV gain 21293372
esv3606138 CNV loss 21293372
esv3606136 CNV loss 21293372
esv3570317 CNV loss 25503493
esv3566399 CNV deletion 23714750
esv33504 CNV loss 17666407
esv2763925 CNV loss 21179565
esv2759365 CNV loss 17122850
esv2664443 CNV deletion 23128226
esv25906 CNV loss 19812545
dgv9986n54 CNV loss 21841781
dgv9985n54 CNV loss 21841781
dgv9984n54 CNV loss 21841781
dgv717n27 CNV loss 19166990
dgv5768n100 CNV loss 25217958
dgv5763n100 CNV loss 25217958
dgv351n21 CNV loss 19592680
dgv1633e212 CNV loss 25503493
dgv111n17 CNV loss 16327808

Relevant External Links for RAB9BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RAB9BP1 Gene

Disorders for RAB9BP1 Gene

Relevant External Links for RAB9BP1

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RAB9BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RAB9BP1 Gene

Publications for RAB9BP1 Gene

  1. Cloning and mapping of human Rab7 and Rab9 cDNA sequences and identification of a Rab9 pseudogene. (PMID: 9126495) Davies JP … Ioannou YA (Genomics 1997) 2 3 60
  2. Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan. (PMID: 23648065) Low SK … Nakamura Y (Cancer science 2013) 3 60
  3. Genome-wide association study identifies 8 novel loci associated with blood pressure responses to interventions in Han Chinese. (PMID: 24165912) He J … Gu D (Circulation. Cardiovascular genetics 2013) 3 60
  4. Genome-wide association study of personality traits in bipolar patients. (PMID: 21368711) Alliey-Rodriguez N … Gershon ES (Psychiatric genetics 2011) 45 60
  5. Genome-wide meta-analysis identifies regions on 7p21 (AHR) and 15q24 (CYP1A2) as determinants of habitual caffeine consumption. (PMID: 21490707) Cornelis MC … Caporaso NE (PLoS genetics 2011) 45 60

Products for RAB9BP1 Gene

Sources for RAB9BP1 Gene

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