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Aliases for RAB5CP2 Gene

Subcategory (RNA class) for RAB5CP2 Gene

lncRNA

Aliases for RAB5CP2 Gene

  • RAB5C, Member RAS Oncogene Family Pseudogene 2 2 3 5

External Ids for RAB5CP2 Gene

ORGUL Members for RAB5CP2 Gene

Previous GeneCards Identifiers for RAB5CP2 Gene

  • GC05P090772

Summaries for RAB5CP2 Gene

GeneCards Summary for RAB5CP2 Gene

RAB5CP2 (RAB5C, Member RAS Oncogene Family Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAB5CP2 Gene

Genomics for RAB5CP2 Gene

Regulatory Elements for RAB5CP2 Gene

Enhancers for RAB5CP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G091468 1.2 FANTOM5 Ensembl ENCODE 0.4 -6.7 -6705 1.8 RNF2 GTF2E2 NRF1 NR3C1 FOSL1 JUND ATF3 IKZF1 ZBTB33 MYC RAB5CP2 ARRDC3
GH05G091476 0.5 FANTOM5 0.7 +0.6 601 0.3 CREB1 RAB5CP2 GC05P091607
GH05G091489 0.6 VISTA 0.4 +14.3 14267 1.4 PKNOX1 ZNF146 PRDM6 POLR2A MNT EP300 SUPT5H RAB5CP2 GC05P091607
GH05G091472 0.2 VISTA 0.7 -3.1 -3093 1.5 RAB5CP2 ARRDC3
GH05G091390 0.7 ENCODE 0.2 -85.9 -85904 0.2 PKNOX1 ZNF362 MAFG DPF2 ZFHX2 CTBP1 GATA3 ZNF316 NFE2 CUX1 ARRDC3 RAB5CP2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RAB5CP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RAB5CP2 Gene

Chromosome:
5
Start:
91,476,382 bp from pter
End:
91,477,020 bp from pter
Size:
639 bases
Orientation:
Plus strand

Genomic View for RAB5CP2 Gene

Genes around RAB5CP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RAB5CP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RAB5CP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAB5CP2 Gene

Proteins for RAB5CP2 Gene

Post-translational modifications for RAB5CP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAB5CP2 Gene

Domains & Families for RAB5CP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RAB5CP2 Gene

Function for RAB5CP2 Gene

Phenotypes for RAB5CP2 Gene

GenomeRNAi human phenotypes for RAB5CP2:
genes like me logo Genes that share phenotypes with RAB5CP2: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RAB5CP2 Gene

Localization for RAB5CP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RAB5CP2 Gene

Pathways & Interactions for RAB5CP2 Gene

SuperPathways for RAB5CP2 Gene

No Data Available

Interacting Proteins for RAB5CP2 Gene

Gene Ontology (GO) - Biological Process for RAB5CP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RAB5CP2 Gene

Drugs & Compounds for RAB5CP2 Gene

No Compound Related Data Available

Transcripts for RAB5CP2 Gene

mRNA/cDNA for RAB5CP2 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RAB5CP2 Gene

No ASD Table

Relevant External Links for RAB5CP2 Gene

GeneLoc Exon Structure for
RAB5CP2
ECgene alternative splicing isoforms for
RAB5CP2

Expression for RAB5CP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RAB5CP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RAB5CP2 Gene:

RAB5CP2
genes like me logo Genes that share expression patterns with RAB5CP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RAB5CP2 Gene

Orthologs for RAB5CP2 Gene

Evolution for RAB5CP2 Gene

ENSEMBL:
Gene Tree for RAB5CP2 (if available)
TreeFam:
Gene Tree for RAB5CP2 (if available)

No data available for Orthologs for RAB5CP2 Gene

Paralogs for RAB5CP2 Gene

No data available for Paralogs for RAB5CP2 Gene

Variants for RAB5CP2 Gene

Relevant External Links for RAB5CP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RAB5CP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RAB5CP2 Gene

Disorders for RAB5CP2 Gene

Relevant External Links for RAB5CP2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RAB5CP2

No disorders were found for RAB5CP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RAB5CP2 Gene

Publications for RAB5CP2 Gene

No publications were found for RAB5CP2 Gene.

Products for RAB5CP2 Gene

Sources for RAB5CP2 Gene

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