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Aliases for RAB5CP1 Gene

Subcategory (RNA class) for RAB5CP1 Gene

antisense

Aliases for RAB5CP1 Gene

  • RAB5C, Member RAS Oncogene Family Pseudogene 1 2 3 5

External Ids for RAB5CP1 Gene

ORGUL Members for RAB5CP1 Gene

Previous GeneCards Identifiers for RAB5CP1 Gene

  • GC10M076185

Summaries for RAB5CP1 Gene

GeneCards Summary for RAB5CP1 Gene

RAB5CP1 (RAB5C, Member RAS Oncogene Family Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAB5CP1 Gene

Genomics for RAB5CP1 Gene

Regulatory Elements for RAB5CP1 Gene

Enhancers for RAB5CP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G074417 2.7 VISTA Ensembl ENCODE 0.4 +5.4 5397 1.4 PKNOX1 FEZF1 ZNF2 YY1 TSHZ1 CREB3 ZNF610 SMARCA4 ZSCAN16 PBX2 ENSG00000227186 ENSG00000234149 RAB5CP1 GC10M074368
GH10G074439 1.8 ENCODE 0.4 -15.3 -15299 0.2 HDAC1 TAL1 ETV1 RAD21 TCF12 FOXM1 GATA2 NCOR1 ETV6 HES1 ADK RAB5CP1 MRPL35P3
GH10G074419 0.7 ENCODE 0.7 +4.5 4501 0.2 ZBTB21 CEBPG BCL11B EP300 ATF2 OSR2 PRDM6 ATF3 POLR2A ZNF629 RAB5CP1 GC10M074368
GH10G074420 0.7 ENCODE 0.7 +4.0 3982 0.2 CTCF ZBTB21 TRIM22 CEBPG ZEB2 ZNF843 RAD21 ATF2 OSR2 PRDM6 RAB5CP1 GC10M074368
GH10G074433 0.8 ENCODE 0.4 -9.4 -9399 0.2 PKNOX1 ZEB1 ZNF664 GATA3 GATA2 ZNF207 MAFK USF2 CEBPB TSHZ1 RAB5CP1 MRPL35P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RAB5CP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RAB5CP1 Gene

Chromosome:
10
Start:
74,423,433 bp from pter
End:
74,424,019 bp from pter
Size:
587 bases
Orientation:
Minus strand

Genomic View for RAB5CP1 Gene

Genes around RAB5CP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RAB5CP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RAB5CP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAB5CP1 Gene

Proteins for RAB5CP1 Gene

Post-translational modifications for RAB5CP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAB5CP1 Gene

Domains & Families for RAB5CP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RAB5CP1 Gene

Function for RAB5CP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RAB5CP1 Gene

Localization for RAB5CP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RAB5CP1 Gene

Pathways & Interactions for RAB5CP1 Gene

SuperPathways for RAB5CP1 Gene

No Data Available

Interacting Proteins for RAB5CP1 Gene

Gene Ontology (GO) - Biological Process for RAB5CP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RAB5CP1 Gene

Drugs & Compounds for RAB5CP1 Gene

No Compound Related Data Available

Transcripts for RAB5CP1 Gene

mRNA/cDNA for RAB5CP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RAB5CP1 Gene

No ASD Table

Relevant External Links for RAB5CP1 Gene

GeneLoc Exon Structure for
RAB5CP1
ECgene alternative splicing isoforms for
RAB5CP1

Expression for RAB5CP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RAB5CP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RAB5CP1 Gene:

RAB5CP1
genes like me logo Genes that share expression patterns with RAB5CP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RAB5CP1 Gene

Orthologs for RAB5CP1 Gene

Evolution for RAB5CP1 Gene

ENSEMBL:
Gene Tree for RAB5CP1 (if available)
TreeFam:
Gene Tree for RAB5CP1 (if available)

No data available for Orthologs for RAB5CP1 Gene

Paralogs for RAB5CP1 Gene

No data available for Paralogs for RAB5CP1 Gene

Variants for RAB5CP1 Gene

Relevant External Links for RAB5CP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RAB5CP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RAB5CP1 Gene

Disorders for RAB5CP1 Gene

Relevant External Links for RAB5CP1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RAB5CP1

No disorders were found for RAB5CP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RAB5CP1 Gene

Publications for RAB5CP1 Gene

No publications were found for RAB5CP1 Gene.

Products for RAB5CP1 Gene

Sources for RAB5CP1 Gene

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