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Aliases & Descriptions for RAB17
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| RAB17, member RAS oncogene family 2 |
|
| | Search outside databases for aliases for RAB17 genePrevious GC identifers: GC02M236532 GC02M237164 GC02M238499 GC02M238769 GC02M238264 |
Summaries for RAB17(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: RAB17_HUMAN, Q9H0T7Function: Might be involved in transcellular transport (By similarity)Gene Wiki entry for RAB17 |
Genomic Location for RAB17
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the RAB17 gene 
Entrez Gene cytogenetic band: 2q37.3 Ensembl cytogenetic band: 2q37.3 HGNC cytogenetic band: 2q37.3RAB17 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure GeneLoc location for GC02M238147:
(about GC identifiers)
Start:
|
238,147,704 bp from pter |
End:
|
238,353,276 bp from pter |
Size:
|
205,573 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000002.10 NT_005120.15
| Proteins for RAB17
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: RAB17_HUMAN, Q9H0T7 (See
protein sequence)Recommended Name: Ras-related protein Rab-17 Size: 212 amino acids; 23491 Da
Subcellular location: Cell membrane; Lipid-anchor; Cytoplasmic side (Potential)
Secondary accessions: Q53QV6 Q6IA73 Q9BVU1 Q9H9U9REFSEQ proteins: NP_071894.1
ENSEMBL proteins: ENSP00000386792 ENSP00000375858 ENSP00000264601 ENSP00000386589
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: RAB17 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for RAB17: Assays for RAB17: | Protein
Domains/ Families for RAB17(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q9H0T7
ProtoNet protein and cluster: Q9H0T7 1 Blocks protein family: IPB001806 Transforming protein P21 RAS signature
UniProtKB/Swiss-Prot: RAB17_HUMAN, Q9H0T7Similarity: Belongs to the small GTPase superfamily. Rab family | Gene Function for RAB17
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_022449
Applied Biosystems Silencer® siRNAs for RAB17
Sigma-Aldrich siRNA for RAB17  Sigma-Aldrich shRNA for RAB17  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_022449                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_022449                                  untagged cDNA clones in CMV expression vector (see all 2): NM_022449 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_022449
UniProtKB/Swiss-Prot: RAB17_HUMAN, Q9H0T7Function: Might be involved in transcellular transport (By similarity)3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for RAB17
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/6 Interacting proteins for RAB17 (ENSP000002646013 Q9H0T71, 2) via UniProtKB, MINT, and/or STRING (see all 6
)About this table
2 Gene Ontology (GO) biological process terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
IEA | -- | | GO:0015031 | protein transport |
IEA | -- | About this table
|
Drugs & Compounds for RAB17(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for RAB17 |
Browse Tocris compounds for RAB17
|
Transcripts for RAB17(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_022449
Sigma-Aldrich siRNA for RAB17  Sigma-Aldrich shRNA for RAB17  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_022449 REFSEQ mRNAs for RAB17 gene: NM_022449.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_022449               OriGene GFP tagged cDNA clone in CMV expression vector: NM_022449                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_022449                                  untagged cDNA clones in CMV expression vector (see all 2): NM_022449  Additional cDNA sequence: AK022600.1 AK225423.1 AL136645.1 BC000929.2 BC007907.2 BC009827.2 BC023661.2 BC050426.1 BX647412.1 CR457282.1 CR533454.1 CR591120.1 CR600396.1 CR606784.1 CR608634.1 CR621894.1 CR624533.1 CR626220.1 8 DOTS entries: DT.445338 DT.120934537 DT.97843061 DT.100657336 DT.95368759 DT.100657337 DT.100657637 DT.95282591 24/160 AceView cDNA sequences (see all 160
):CB137770 BI759255 CR600396 AW009045 BU160968 AL548167 CB135219 BF477737 AK022600 CB141213 AI206424 NM_022449 AA913129 AI927566 BU956864 BC023661 AI783777 CK430084 CR621894 CB135611 CR606784 BQ920683 BU739652 CA391377
highest scoring ESTs for RAB17:AA418063 AI904602 AK022600 AL136645 AL543811 AL548167 AL553872 AU124658 BC007907 BC009827 Unigene Cluster for RAB17: RAB17, member RAS oncogene family Hs.708264 [show with all ESTs]Unigene Representative Sequence: BX647412
GeneLoc Exon Structure
5/7 Alternative Splicing Database (ASD) splice patterns (SP) for RAB17 (see all 7
)
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | · | 1e | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6a | · | 6b | · | 6c | · | 6d | · | 6e | · | 6f | |
| SP1: | |   | |   | |   | - |   | - |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | - |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | - |   | - |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for RAB17
4 Ensembl transcripts including schematic representations: ENST00000409576
ENST00000392001
ENST00000264601
ENST00000409822
|
Expression for RAB17
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| RAB17 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for RAB17
1 / 2 / 3 3 probe-sets matching RAB17 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GTCTCCCGGC
SOURCE GeneReport for Unigene cluster: Hs.708264
|
Orthologs for RAB17
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for RAB17 gene from 4 species
About this table Species with no ortholog for RAB17
ENSEMBL Gene Tree for RAB17 | Paralogs for RAB17(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for RAB17 gene
- RAB5C2 RAB5A2 RAB5B2
|
SNPs/Variants for RAB17(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for RAB17 (up to first 250kb)
|
Disorders & Mutations for RAB17
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602206
|
Medical News for RAB17(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for RAB17 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/17 PubMed articles for RAB17 gene (see all 17
): |
Search for RAB17
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing RAB17
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing RAB17
(According to HUGE)
About This Section
| -- |
Specialized Databases showing RAB17(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for RAB17(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for RAB17:

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| | | | Search Tocris compounds for RAB17 |
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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