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Aliases for PYCARD-AS1 Gene

Subcategory (RNA class) for PYCARD-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for PYCARD-AS1 Gene

  • PYCARD Antisense RNA 1 2 3 4 5
  • PYCARD Opposite Strand 2 3
  • C16orf98 3 4
  • PYCARDOS 3 4
  • Chromosome 16 Open Reading Frame 98 2
  • PYCARD Antisense Gene Protein 1 4
  • PYCARD Opposite Strand Protein 4

External Ids for PYCARD-AS1 Gene

Previous HGNC Symbols for PYCARD-AS1 Gene

  • C16orf98

Previous GeneCards Identifiers for PYCARD-AS1 Gene

  • GC16P031202

Summaries for PYCARD-AS1 Gene

GeneCards Summary for PYCARD-AS1 Gene

PYCARD-AS1 (PYCARD Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PYCARD-AS1 Gene

Genomics for PYCARD-AS1 Gene

Regulatory Elements for PYCARD-AS1 Gene

Enhancers for PYCARD-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G031199 1 ENCODE 0.7 -0.2 -218 3.8 HDGF PKNOX1 SIN3A ZNF2 TCF12 GLIS2 KDM4B ZNF263 REST ZNF592 PYCARD PYCARD-AS1 ENSG00000260060
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PYCARD-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for PYCARD-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for PYCARD-AS1 Gene

31,201,885 bp from pter
31,203,452 bp from pter
1,568 bases
Plus strand

Genomic View for PYCARD-AS1 Gene

Genes around PYCARD-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PYCARD-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PYCARD-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PYCARD-AS1 Gene

Proteins for PYCARD-AS1 Gene

  • Protein details for PYCARD-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein PYCARD-AS1
    Protein Accession:

    Protein attributes for PYCARD-AS1 Gene

    204 amino acids
    Molecular mass:
    21949 Da
    Quaternary structure:
    No Data Available
    • Sequence=BX464768; Type=Frameshift; Positions=177; Evidence={ECO:0000305};

neXtProt entry for PYCARD-AS1 Gene

Post-translational modifications for PYCARD-AS1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for PYCARD-AS1 Gene

Domains & Families for PYCARD-AS1 Gene

Protein Domains for PYCARD-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PYCARD-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PYCARD-AS1 Gene

Function for PYCARD-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PYCARD-AS1 Gene

Localization for PYCARD-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PYCARD-AS1 Gene

Pathways & Interactions for PYCARD-AS1 Gene

SuperPathways for PYCARD-AS1 Gene

No Data Available

Interacting Proteins for PYCARD-AS1 Gene

Gene Ontology (GO) - Biological Process for PYCARD-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for PYCARD-AS1 Gene

Drugs & Compounds for PYCARD-AS1 Gene

No Compound Related Data Available

Transcripts for PYCARD-AS1 Gene


(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PYCARD-AS1 Gene

No ASD Table

Relevant External Links for PYCARD-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for PYCARD-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PYCARD-AS1 Gene

Protein differential expression in normal tissues from HIPED for PYCARD-AS1 Gene

This gene is overexpressed in Platelet (68.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for PYCARD-AS1 Gene

Protein tissue co-expression partners for PYCARD-AS1 Gene

genes like me logo Genes that share expression patterns with PYCARD-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PYCARD-AS1 Gene

Orthologs for PYCARD-AS1 Gene

Evolution for PYCARD-AS1 Gene

Gene Tree for PYCARD-AS1 (if available)
Gene Tree for PYCARD-AS1 (if available)

No data available for Orthologs for PYCARD-AS1 Gene

Paralogs for PYCARD-AS1 Gene

No data available for Paralogs for PYCARD-AS1 Gene

Variants for PYCARD-AS1 Gene

Sequence variations from dbSNP and Humsavar for PYCARD-AS1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000722745 -- 31,203,915(+) GCTGT(A/G)ATGCC intron-variant, upstream-variant-2KB
rs1001661265 -- 31,201,367(+) AAGGA(C/T)GGGGG downstream-variant-500B, upstream-variant-2KB
rs1002321311 -- 31,202,869(+) GTCCC(C/G)TCCCA nc-transcript-variant, upstream-variant-2KB
rs1002787067 -- 31,202,511(+) TCCAG(C/G)TAGAA nc-transcript-variant, reference, stop-gained
rs1002931926 -- 31,200,189(+) TCATA(C/T)TTCCC upstream-variant-2KB

Variation tolerance for PYCARD-AS1 Gene

Gene Damage Index Score: 2.39; 42.32% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for PYCARD-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for PYCARD-AS1 Gene

Disorders for PYCARD-AS1 Gene

Relevant External Links for PYCARD-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for PYCARD-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PYCARD-AS1 Gene

Publications for PYCARD-AS1 Gene

  1. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4 64

Products for PYCARD-AS1 Gene

Sources for PYCARD-AS1 Gene

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