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Aliases for PYCARD-AS1 Gene

Subcategory (RNA class) for PYCARD-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for PYCARD-AS1 Gene

  • PYCARD Antisense RNA 1 2 3 4
  • PYCARD Opposite Strand 2 3
  • C16orf98 3 4
  • PYCARDOS 3 4
  • Chromosome 16 Open Reading Frame 98 2
  • PYCARD Antisense Gene Protein 1 4
  • PYCARD Opposite Strand Protein 4

External Ids for PYCARD-AS1 Gene

Previous Symbols for PYCARD-AS1 Gene

  • C16orf98
  • PYCARDOS

Summaries for PYCARD-AS1 Gene

GeneCards Summary for PYCARD-AS1 Gene

PYCARD-AS1 (PYCARD Antisense RNA 1) is a RNA Gene, and belongs to non-coding RNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PYCARD-AS1 Gene

Genomics for PYCARD-AS1 Gene

Genomic Location for PYCARD-AS1 Gene

Start:
31,201,885 bp from pter
End:
31,203,452 bp from pter
Size:
1,568 bases
Orientation:
Plus strand

Genomic View for PYCARD-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PYCARD-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PYCARD-AS1 Gene

No data available for Regulatory Elements for PYCARD-AS1 Gene

Proteins for PYCARD-AS1 Gene

  • Protein details for PYCARD-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    I3L0S3-PYAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein PYCARD-AS1
    Protein Accession:
    I3L0S3
    Secondary Accessions:

    Protein attributes for PYCARD-AS1 Gene

    Size:
    204 amino acids
    Molecular mass:
    21949 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BX464768; Type=Frameshift; Positions=177; Evidence={ECO:0000305};

neXtProt entry for PYCARD-AS1 Gene

Proteomics data for PYCARD-AS1 Gene at MOPED

Post-translational modifications for PYCARD-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PYCARD-AS1 Gene

Domains for PYCARD-AS1 Gene

Protein Domains for PYCARD-AS1 Gene

ProtoNet:
genes like me logo Genes that share domains with PYCARD-AS1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for PYCARD-AS1 Gene

Function for PYCARD-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for PYCARD-AS1 Gene

Localization for PYCARD-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for PYCARD-AS1 Gene

Pathways for PYCARD-AS1 Gene

SuperPathways for PYCARD-AS1 Gene

No Data Available

Interacting Proteins for PYCARD-AS1 Gene

Gene Ontology (GO) - Biological Process for PYCARD-AS1 Gene

None

No data available for Pathways by source for PYCARD-AS1 Gene

Transcripts for PYCARD-AS1 Gene

mRNA/cDNA for PYCARD-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PYCARD-AS1 Gene

No ASD Table

Relevant External Links for PYCARD-AS1 Gene

GeneLoc Exon Structure for
PYCARD-AS1
ECgene alternative splicing isoforms for
PYCARD-AS1

Expression for PYCARD-AS1 Gene

mRNA expression in normal human tissues for PYCARD-AS1 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for PYCARD-AS1 Gene

genes like me logo Genes that share expressions with PYCARD-AS1: view

Orthologs for PYCARD-AS1 Gene

Evolution for PYCARD-AS1 Gene

ENSEMBL:
Gene Tree for PYCARD-AS1 (if available)
TreeFam:
Gene Tree for PYCARD-AS1 (if available)

No data available for Orthologs for PYCARD-AS1 Gene

Paralogs for PYCARD-AS1 Gene

No data available for Paralogs for PYCARD-AS1 Gene

Variants for PYCARD-AS1 Gene

Sequence variations from dbSNP and Humsavar for PYCARD-AS1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs17839573 -- 31,200,111(+) GTACT(C/T)AGGAA upstream-variant-2KB
rs75216100 -- 31,200,951(+) TTTTT(G/T)AGCAA upstream-variant-2KB
rs115903914 -- 31,200,004(+) GTGGT(G/T)GTTTG upstream-variant-2KB
rs146727706 -- 31,200,428(+) ACCTG(C/G)GAGGC upstream-variant-2KB
rs184914902 -- 31,200,869(+) CTCCA(A/G)AAAAA upstream-variant-2KB

Relevant External Links for PYCARD-AS1 Gene

HapMap Linkage Disequilibrium report
PYCARD-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for PYCARD-AS1 Gene

Disorders for PYCARD-AS1 Gene

No disorders were found for PYCARD-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for PYCARD-AS1 Gene

Publications for PYCARD-AS1 Gene

  1. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4

Products for PYCARD-AS1 Gene

Sources for PYCARD-AS1 Gene

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