Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PUDPP1 Gene

Aliases for PUDPP1 Gene

  • Pseudouridine 5'-Phosphatase Pseudogene 1 2
  • Pseudouridine 5-Phosphatase Pseudogene 1 2 3 5
  • Haloacid Dehalogenase-Like Hydrolase Domain Containing 1 Pseudogene 1 2 3
  • Family With Sequence Similarity 16, Member A, Y-Linked 2 3
  • HDHD Family Member 1B, Pseudogene 2 3
  • Haloacid Dehalogenase-Like Hydrolase Domain Containing 1A Pseudogene 3
  • FAM16AY 3
  • HDHD1BP 3
  • HDHD1P1 3

External Ids for PUDPP1 Gene

Previous HGNC Symbols for PUDPP1 Gene

  • FAM16AY
  • HDHD1P1

Summaries for PUDPP1 Gene

GeneCards Summary for PUDPP1 Gene

PUDPP1 (Pseudouridine 5'-Phosphatase Pseudogene 1) is a Pseudogene.

Additional gene information for PUDPP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PUDPP1 Gene

Genomics for PUDPP1 Gene

GeneHancer (GH) Regulatory Elements for PUDPP1 Gene

Promoters and enhancers for PUDPP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0YI015455 Enhancer 1 FANTOM5 ENCODE 550.8 +0.1 146 1.5 SOX13 FOXA2 THRB RARA POLR2A RERE FOSL2 NR2F6 MIXL1 GATAD2A PUDPP1 GC0YM015426
GH0YI015424 Enhancer 0.3 ENCODE 0.3 +31.0 30988 1.8 SP1 GC0YM015426 PUDPP1 PIR56666
GH0YI015535 Enhancer 0.4 ENCODE 0.2 -79.9 -79929 1.3 ATF7 FOSL2 ATF2 STSP1 PUDPP1
GH0YI015510 Enhancer 0.2 ENCODE 0.2 -54.4 -54402 0.3 STSP1 PUDPP1
GH0YI015385 Enhancer 0.2 ENCODE 0.2 +70.7 70708 0.2 GC0YM015426 PIR56666 PUDPP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PUDPP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PUDPP1 Gene

Genomic Locations for PUDPP1 Gene
107,413 bases
Minus strand

Genomic View for PUDPP1 Gene

Genes around PUDPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PUDPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PUDPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PUDPP1 Gene

Proteins for PUDPP1 Gene

Post-translational modifications for PUDPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PUDPP1 Gene

Domains & Families for PUDPP1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PUDPP1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PUDPP1 Gene

Function for PUDPP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PUDPP1 Gene

Localization for PUDPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PUDPP1 Gene

Pathways & Interactions for PUDPP1 Gene

SuperPathways for PUDPP1 Gene

No Data Available

Interacting Proteins for PUDPP1 Gene

Gene Ontology (GO) - Biological Process for PUDPP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for PUDPP1 Gene

Drugs & Compounds for PUDPP1 Gene

No Compound Related Data Available

Transcripts for PUDPP1 Gene

mRNA/cDNA for PUDPP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PUDPP1 Gene

No ASD Table

Relevant External Links for PUDPP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for PUDPP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of PUDPP1 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PUDPP1 Gene

Orthologs for PUDPP1 Gene

Evolution for PUDPP1 Gene

Gene Tree for PUDPP1 (if available)
Gene Tree for PUDPP1 (if available)

No data available for Orthologs for PUDPP1 Gene

Paralogs for PUDPP1 Gene

No data available for Paralogs for PUDPP1 Gene

Variants for PUDPP1 Gene

Additional Variant Information for PUDPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PUDPP1 Gene

Disorders for PUDPP1 Gene

No disorders were found for PUDPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PUDPP1 Gene

Publications for PUDPP1 Gene

  1. Isolation of a new gene from the distal short arm of the human X chromosome that escapes X-inactivation. (PMID: 1284467) Yen PH … Shapiro L (Human molecular genetics 1992) 2 3 58
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58
  3. The human enamel protein gene amelogenin is expressed from both the X and the Y chromosomes. (PMID: 1734713) Salido EC … Shapiro LJ (American journal of human genetics 1992) 2 58

Products for PUDPP1 Gene

Sources for PUDPP1 Gene

Loading form....