PTPN11 Gene
protein-coding GIFtS: 73
GCID: GC12P112856
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protein tyrosine phosphatase, non-receptor type 11(Previous name: Noonan syndrome 1 ) (Previous symbol: NS1)
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Aliases for PTPN11 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb) About This Section
|
| Aliases |
|---|
| Protein Tyrosine Phosphatase, Non-Receptor Type 111 2 | | PTP-1D2 3 | | PTP2C1 2 3 5 | | PTP-2C2 3 | | SH-PTP21 2 3 | | SH-PTP32 3 | | NS11 2 5 | | EC 3.1.3.483 8 | | SHP21 2 5 | | Noonan Syndrome 11 | | BPTP31 2 | | CFC2 | | SHP-21 3 | | Tyrosine-Protein Phosphatase Non-Receptor Type 112 | | Protein-Tyrosine Phosphatase 1D2 3 | | SHPTP23 | | Protein-Tyrosine Phosphatase 2C2 3 | | Shp23 |
Export aliases for PTPN11 gene to outside databasesPrevious GC identifers: GC12P111712 GC12P112333 GC12P112639 GC12P111268 GC12P111319 GC12P109868 |
Summaries for PTPN11 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| Entrez Gene summary for PTPN11: The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to besignaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitoticcycle, and oncogenic transformation. This PTP contains two tandem Src homology-2 domains, which function asphospho-tyrosine binding domains and mediate the interaction of this PTP with its substrates. This PTP is widelyexpressed in most tissues and plays a regulatory role in various cell signaling events that are important for adiversity of cell functions, such as mitogenic activation, metabolic control, transcription regulation, and cellmigration. Mutations in this gene are a cause of Noonan syndrome as well as acute myeloid leukemia. Two transcriptvariants encoding different isoforms have been found for this gene. (provided by RefSeq, May 2012) UniProtKB/Swiss-Prot: PTN11_HUMAN, Q06124Function: Acts downstream of various receptor and cytoplasmic protein tyrosine kinases to participate in the signaltransduction from the cell surface to the nucleus. Dephosphorylates ROCK2 at Tyr-722 resulting in stimulatation of itsRhoA binding activity
summary
for PTPN11: Protein tyrosine phosphatases (PTPs) are a group of enzymes that catalyze the removal of phosphate groups from tyrosine residues by the hydrolysis of phosphoric acid monoesters. They directly oppose the actions of kinases and phosphorylases and therefore play an integral role in many signal transduction pathways. PTPs are cysteine-dependent phosphatases that contain a conserved C[X]5R motif essential for enzymatic activity. PTPs are currently divided into five subtypes; tyrosine-specific phosphatases (e.g. PTP1B), dual specificity phosphatases (DSPs) (e.g. DUSP1), Cdc25 phosphatases (e.g. Cdc25A), myotubularin-related phosphatases (e.g. MTMR13) and low molecular weight phosphatases (e.g. PTPase A). Perturbations in PTP activity has been implicated in human diseases, including type II diabetes. PTPs have been identified as a negative regulator of the insulin signaling by dephosphorylating phosphotyrosine residues of insulin receptor kinase. In cancers, PTPs dephosphorylate EGFR, JAK2 and TYK2 kinases, promoting oncogenic transformation. Gene Wiki entry for PTPN11
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Genomic Views for PTPN11 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics) About This Section
| RefSeq DNA sequence:- NC_000012.11 NC_018923.1 NT_009775.17
Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PTPN11 gene promoter: AP-2alpha isoform 3 STAT3 AP-2alpha isoform 4 AP-2alpha isoform 2 AP-2alpha AP-2alphaA Other transcription factors
Search SABiosciences Chromatin IP Primers for PTPN11
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PTPN11 |
Genomic Location: Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 12q24 Ensembl cytogenetic band: 12q24.13 HGNC cytogenetic band: 12q24.1PTPN11 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)

GeneLoc information about chromosome 12 GeneLoc Exon Structure GeneLoc location for GC12P112856: view genomic region
(about GC identifiers)
Start:
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112,856,155 bp from pter |
End:
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112,947,717 bp from pter |
Size:
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91,563 bases |
Orientation:
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plus strand |
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Proteins for PTPN11 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
| UniProtKB/Swiss-Prot: PTN11_HUMAN, Q06124 (See
protein sequence)Recommended Name: Tyrosine-protein phosphatase non-receptor type 11 Size: 597 amino acids; 68436 Da
Subunit: Interacts with phosphorylated LIME1 and BCAR3. Interacts with SHB and INPP5D/SHIP1 (By similarity). Interactswith MILR1 (tyrosine-phosphorylated). Interacts with FLT1 (tyrosine-phosphorylated), FLT3 (tyrosine-phosphorylated),FLT4 (tyrosine-phosphorylated), KIT and GRB2. Interacts with PDGFRA (tyrosine phosphorylated). Interacts (via SH2domain) with TEK/TIE2 (tyrosine phosphorylated) (By similarity). Interacts with PTPNS1 and CD84. Interacts withphosphorylated SIT1 and MPZL1. Interacts with FCRL3, FCRL4, FCRL6 and ANKHD1. Interacts with KIR2DL1; the interactionis enhanced by ARRB2. Interacts with GAB2. Interacts with TERT; the interaction retains TERT in the nucleus. Interactswith PECAM1 and FER. Interacts with EPHA2 (activated); participates in PTK2/FAK1 dephosphorylation in EPHA2 downstreamsignaling. Interacts with ROS1; mediates PTPN11 phosphorylation. Interacts with PDGFRB (tyrosine phosphorylated); thisinteraction increases the PTPN11 phosphatase activity. Interacts with GAREM isoform 1 (tyrosine phosphorylated); theinteraction increases MAPK/ERK activity and does not affect the GRB2/SOS complex formation
Subcellular location: Cytoplasm
6 PDB 3D structures from and Proteopedia for PTPN11:2SHP (3D)
  3B7O (3D)
  3MOW (3D)
  3O5X (3D)
  3TKZ (3D)
  3TL0 (3D)
 
Secondary accessions: A8K1D9 Q96HD7Alternative splicing: 3 isoforms: Q06124-1 Q06124-2 Q06124-3 Explore the universe of human proteins at neXtProt for PTPN11: NX_Q06124
Post-translational modifications:
Phosphorylated on Tyr-546 and Tyr-584 upon receptor protein tyrosine kinase activation; which creates a binding sitefor GRB2 and other SH2-containing proteins. Phosphorylated upon activation of the receptor-type kinase FLT3.Phosphorylated upon activation of the receptor-type kinase PDGFRA (By similarity). Phosphorylated by activated PDGFRB1
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q06124 4/20 DME Specific Peptides for PTPN11 (Q06124) (see all 20)
PTPN11 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins (2 alternative transcripts):
NP_002825.3 NP_542168.1 ENSEMBL proteins: ENSP00000376376 ENSP00000340944 ENSP00000437013 Reactome Protein details: Q06124 Human Recombinant Protein Products:
Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view): About this table
PTPN11 for ontologies About GeneDecksing
PTPN11 Antibody Products: Assay Products for PTPN11: |
Protein
Domains / Families for PTPN11 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
PTPN11 for domains About GeneDecksing
5 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q06124ProtoNet protein and cluster: Q06124 2 Blocks protein families: IPB000242 Protein tyrosine phosphatase signature IPB000980 SH2 domain signature
UniProtKB/Swiss-Prot: PTN11_HUMAN, Q06124Domain: The SH2 domains repress phosphatase activity. Binding of these domains to phosphotyrosine-containing proteinsrelieves this auto-inhibition, possibly by inducing a conformational change in the enzymeSimilarity: Belongs to the protein-tyrosine phosphatase family. Non-receptor class 2 subfamilySimilarity: Contains 2 SH2 domainsSimilarity: Contains 1 tyrosine-protein phosphatase domain |
Function for PTPN11 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
| Function Summary: UniProtKB/Swiss-Prot: PTN11_HUMAN, Q06124Function: Acts downstream of various receptor and cytoplasmic protein tyrosine kinases to participate in the signaltransduction from the cell surface to the nucleus. Dephosphorylates ROCK2 at Tyr-722 resulting in stimulatation of itsRhoA binding activityCatalytic activity: Protein tyrosine phosphate + H(2)O = protein tyrosine + phosphate Genatlas biochemistry entry for PTPN11:protein tyrosine phosphatase,non receptor type 11,with two SH2 domains,expressed in heart,brain,skeletal muscle withhomology to Drosophila corkscrew,involved in intracellular signal transduction in response toPDGF,EGF,insulin,interacting with protein zero related (PZR) for cell signaling,overexpressed in neutrophils cellsfrom patients with severe congenital neutropenia (defective dephosphorylation of proteins involved in signalingpathways) Enzyme Number (IUBMB): EC 3.1.3.481 2
Clone Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PTPN11 (see all 4) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PTPN11 OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: PTPN11 (NM_002834) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PTPN11 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PTPN11  |
In Situ Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTPN11 |
Gene Ontology (GO): 5/11 molecular function terms (GO ID links to tree view) (see all 11): About this table
PTPN11 for ontologies About GeneDecksing
4 GenomeRNAi human phenotypes for PTPN11: Animal Models: Mouse knock-outs for PTPN11: Ptpn11tm1Rbn Ptpn11tm2Bgn Ptpn11tm1.2Cbm Ptpn11tm1Paw 15/26 MGI mutant phenotypes (inferred from 16 alleles ) (MGI details for Ptpn11) (see all 26):
PTPN11 for phenotypes About GeneDecksing
|
Pathways & Interactions for PTPN11 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
| Unified GeneCards pathways - 5/88 super-pathways (see all 88) About this table  See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Signaling by FGFR | | | 2 | PIP3 activates AKT signaling | | | 3 | Development_CNTF receptor signaling | | | 4 | IRS-related events | | | 5 | Development HGF signaling pathway | |
Pathway sources See GeneCards unified pathways Show all pathways
5/22 EMD Millipore Pathways for PTPN11 (see all 22) 1 R&D Systems Pathway for PTPN11 1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for PTPN11 3
Cell Signaling Technology (CST) Pathways for PTPN11 5/24 GeneGo (Thomson Reuters) Pathways for PTPN11 (see all 24) 5/44 BioSystems Pathways for PTPN11 (see all 44) 
5/67
Reactome Pathways for PTPN11 (see all 67)
5/8
Kegg Pathways (Kegg details for PTPN11) (see all 8):
PTPN11 for pathways About GeneDecksing
Interactions:
SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PTPN11
STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)
 5/329 Interacting proteins for PTPN11 (Q061241, 2, 3 ENSP000003409444) via UniProtKB, MINT, STRING, and/or I2D (see all 329)| Interactant | Interaction Details |
|---|
| GeneCard | External ID(s) |
|---|
| GAB1 | Q134801, 2, 3, ENSP000002629954 | EBI-297779,EBI-517684 MINT-6169355 MINT-6169300 MINT-6169451 MINT-6169344 MINT-8025571 MINT-8029574 MINT-6169406 MINT-6169374 MINT-8029606 MINT-8288652 MINT-8025555 MINT-7026140 MINT-6169338 MINT-6169389 MINT-6169309 MINT-6169327 MINT-6169291 MINT-8029590 I2D:
score=10 STRING: ENSP00000262995 | | GRB2 | P629931, 2, 3, ENSP000003390074 | EBI-297779,EBI-401755 MINT-7300447 MINT-61552 I2D:
score=11 STRING: ENSP00000339007 | | PECAM1 | P162842, 3 | MINT-8033280 MINT-8033310 MINT-8031339 MINT-8033235 MINT-8031324 MINT-8031354 MINT-8033295 I2D:
score=3 | | CCKBR | P322392, 3, ENSP000003355444 | MINT-3381499 MINT-3381756 MINT-8037752 MINT-3381410 MINT-3381872 I2D:
score=2 STRING: ENSP00000335544 | | EGFR | P005332, 3, ENSP000002754934 | MINT-61484 MINT-61492 MINT-61488 MINT-74689 I2D:
score=6 STRING: ENSP00000275493 | About this table
Gene Ontology (GO): 5/36 biological process terms (GO ID links to tree view) (see all 36): About this table
PTPN11 for ontologies About GeneDecksing
|
Drugs & Compounds for PTPN11 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
PTPN11 for compounds About GeneDecksing
 |
Enzo Life Sciences drugs & compounds for PTPN11 |
Compounds for PTPN11 available from Tocris Bioscience About this table
| Compound | Action |
CAS
# |
|---|
| NSC 87877 | Potent inhibitor of shp2 and shp1 PTP | [56990-57-9] |
2 HMDB Compounds for PTPN11 About this table
1 DrugBank Compound for PTPN11 About this table
10/59 Novoseek chemical compound relationships for PTPN11 gene (see all 59) About this table
| Compound |
-log (P-Val) |
Hits |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| tyrosine |
89.3 |
917 |
9129156 (6), 9582366 (6), 7629070 (6), 19275884 (5) (see all 99) |
| phosphotyrosine |
82 |
54 |
12731888 (2), 11684012 (2), 7681217 (1), 8890167 (1) (see all 41) |
| gp 130 |
72.8 |
61 |
10946280 (4), 12593670 (4), 9285712 (3), 12403768 (3) (see all 26) |
| phosphatidylinositol |
69.5 |
62 |
9632795 (3), 8647870 (3), 9565634 (2), 10397152 (2) (see all 45) |
| phenylalanine |
47.8 |
12 |
8622663 (1), 8943348 (1), 9756938 (1), 8959326 (1) (see all 10) |
| phenylarsine oxide |
47.7 |
2 |
7935386 (1) |
| inositol |
46.3 |
17 |
10651806 (1), 11709085 (1), 10623804 (1), 17984366 (1) (see all 16) |
| ly294002 |
44.4 |
2 |
14762163 (1), 11335710 (1) |
| sodium orthovanadate |
42.6 |
1 |
10540326 (1) |
| echistatin |
41.1 |
5 |
12399420 (3), 16195423 (1) |
Search CenterWatch for drugs/clinical trials and news about PTPN11 / PTN11 
|
Transcripts for PTPN11 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
) About This Section
| REFSEQ mRNAs for PTPN11 gene (2 alternative transcripts): NM_002834.3 NM_080601.1 Unigene Cluster for PTPN11: Protein tyrosine phosphatase, non-receptor type 11 Hs.506852 [show with all ESTs]Unigene Representative Sequence: NM_0028344 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000531326 ENST00000392597(uc001ttw.1) ENST00000351677(uc001ttx.3) ENST00000530818
Clone Products: |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PTPN11 (see all 4) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PTPN11 OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: PTPN11 (NM_002834) | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PTPN11 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PTPN11  |
Additional cDNA sequence: AK289854.1 AK312147.1 BC007869.2 BC008692.1 BC025181.1 BC030949.1 BT007106.1 BX537632.1 D13540.1 EU779706.1 EU779707.1 EU779708.1 L03535.1 L07527.1 L08807.1 S78088.1 U79291.1 X70766.1 18 DOTS entries: DT.411692 DT.99944225 DT.100733832 DT.91769243 DT.100656212 DT.121153732 DT.95354784 DT.121153765 DT.120647580 DT.70100615 DT.95127024 DT.100783460 DT.121153563 DT.121153748 DT.91871508 DT.92421803 DT.120843678 DT.99974908 1484 AceView cDNA sequences (see top 24): CR605343 CD049940 BF102663 BG742360 BF365510 BF037064 CB122576 AV712841 BE542112 BE886762 BM550524 AA765096 BG898041 AA341207 BG284893 BI830346 BM794666 CD651903 AA364282 AA313299 BM873857 CB123159 AA382251 BE740256 W60287 CF128094 AA314302 BU185398 BE792341 AI097230 BG285724 AW405946 AW059516 BU160895 AA307193 BG289282 CB131938 BP430232 AW406003 AA315537 BE880113 BE383217 CR610164 BC004138 CA950580 BQ683339 BE278100 F29250 BQ417364 BU528497 BI227225 AA306182 AA352866 BU790436 BM888421 BE877108 AA321644 BM473884 BE797081 BF589532 CD676521 CR599701 BE782180 AI967970 BI497103 BQ787748 BE267900 CB147739 BQ677828 BE383019 AA644222 BG109884 AA329690 CF126191 BQ071929 AA360833 BQ688395 BM854650 C05221 BE909561 BC071912 BM696283 BU526614 BX951572 BE296681 CA441817 BU196052 BI223825 BE266156 BG178854 CB116796 AV706576 BU164316 BM914982 CA772394 BG110137 CF128216 BM800739 BM798157 D12002 BE206492 AA360934 BU074678 BE779232 BQ214477 W60378 CF126978 CR595727 BX114871 AI924245 AA374206 BQ214278 BE790807 CR595147 BE897317 CB136218 AW407761 AW405347 BM454943 BQ027469 CR624575 CR610998 CR618245 AA377277 BM466516 BE394537 BG499282 CR625620 BE537402 AI867523 BU078966 BQ605334 BE268077 BM705443 BM749129 BF792187 BU662058 BF797358 BU509143 BI439081 AI718939 AA306101 BU166358 BE783660 AA315486 CB132331 AA300950 BQ214666 BI438493 CR603976 CR622401 BE778575 AA312165 BG035085 CB149157 BG109087 BE888230 NM_000970 CB135576 CB132341 BE783434 BE278721 AW405713 BI829477 BI545879 BM466459 AA328009 BM700074 BI335801 AA328180 BQ648096 BM846323 AA308575 BQ632734 F27501 BG109306 BM471972 AL523602 BM821286 CB140996 BG109947 BC013863 AA355554 BM802399 BE257908 BE731235 CR608788 AW238895 CB153901 CF128365 AA311815 CB132371 CB120507 BE512842 BE409026 BU079092 BM829804 AA313712 AA374122 BU785250 CA941003 AA313764 CR605631 AA975177 AV654428 CA777112 BI913380 CR623025 AV708487 BE884819 BE018336 BE872857 BG110389 BU665153 CR605132 AA360905 AA326335 AW407086 AW366764 AA167295 BE894877 CR612863 BM798036 AA313900 CK430262 BG504448 CB122615 BE560749 CB124529 AA313242 CB115027 BE378172 AA128649 BX434329 AW880578 BG032426 AW956100 BM049229 BM819165 BG529652 BM559143 D31005 BE884646 BP378685 CB121046 BQ948122 BI195958 BF973365 AA007561 BQ421574 BE880805 AI744924 AA330370 BI869580 BQ652083 D55733 BE265938 BP372765 BG392119 BG033571 CB134435 BX410405 BG397262 AW880571 AW406734 AA582279 AA312972 AA314831 CD048641 BI763374 BG825883 AA774837 AA364348 CB118534 BG685720 BG330957 BF305275 BM511067 BE928662 BU517025 BM552223 D57284 AA364721 BM051534 BE269842 BG756426 CD050419 BE786029 BI197252 CF131102 CA413318 BX476536 AW327349 BI227286 BE397569 CF134649 BG342071 CB131964 BU509890 AJ707260 BG686414 BE879868 BE408857 AW452748 AA364088 BG825332 BM353714 AA298857 BI091217 CB114932 BI861641 AA375115 AA330229 BM263517 BQ942715 CA405502 BG753365 BE881788 BF315077 AA626531 BF349958 AA115154 CA453836 BU602509 BG534458 BE548208 AA316528 BM469970 BE546609 BE616728 BM312750 AV713873 AA180533 BE780732 BF794997 CB070137 CD514153 BE256130 CA950080 BU954243 AJ711722 BG826734 BG113260 BU580830 BG390667 BG397598 BE394728 CF131147 CA436162 BM697998 BE910090 AA953541 BG324273 BI334116 BE254278 CN484975 BG392830 CB069545 AA485899 CB116565 CB144877 BE905513 D55962 BQ652577 BE538412 BE568097 BI226467 CB069043 BE783746 BF205126 CF127097 BG394227 BU072858 BM852776 BI116289 BE560319 BU170410 BE866166 BG285962 AW406286 BG256623 CA849113 BM314709 BG987584 BI222229 CA772762 AV714856 CA942436 BE791389 BG827165 BE564659 CB149115 BG490978 BF305233 BE070294 BU193338 CD639017 AA360343 CA435106 BU179955 BM016899 BX385707 D17554 BG386023 BG033781 BG282131 AA773454 BQ213521 BE410512 BE257867 BF574432 BE266346 BI117567 BG166380 AA303669 BU170605 BM015895 AV751995 AA385584 BI194978 CD049618 AA352996 CD386670 BE267768 BM017702 BG030131 AA379418 BE293637 BG179840 BU078205 AI247302 CF127435 CA337323 BM312511 BM852324 BE889549 BE873726 BG759315 BE892127 AW577511 BE786596 BI090458 BF974044 BF203203 AW406101 BG260116 BE799827 BG250054 BG473547 BG032870 AW406954 CD640506 AA373697 BE897652 BF037566 BE788168 BM838583 BQ066063 BE799027 AA131296 BF870358 N83298 BM843972 BE275519 BE783854 CA773715 CA947030 CF126746 BU171500 AA314963 AA955008 BF184353 AA953173 BG328704 BG291055 BM457428 BE613484 BM795582 BG396863 BM799251 BF797646 BE560855 BM010255 BG489824 BG336221 BF984247 BE910405 CB135032 AW327711 BE619090 BU196503 CB268161 BX410404 BE790565 CB267844 T57948 BG496348 AA361594 BG109318 AW407022 AV724384 BI086574 BU790403 CN482690 AW366761 BE379915 CF131125 AL703668 BI114431 BE795180 BG655039 BE383207 BG821328 BE798716 BF103886 BE545458 AW245902 BF663714 BE875921 AW404887 BU615290 BG179583 BF973139 BG759457 N22493 BF797677 BG116071 BG339900 AJ706945 CB115765 BU076484 AA374911 BU074751 BQ440877 BG397420 BE788580 AA312509 BF036669 BG342106 BI258314 BE898208 AA343157 AA307591 CK126115 BF036476 BE794423 BM353045 BE172530 BG167369 BM051472 BG531178 BE279975 BE254404 AA296217 BQ631925 BQ222922 N44620 AW409732 BQ581452 AW404881 BI911539 BE314109 BQ882846 BI225572 BU581622 BF036230 BE567867 BQ777388 BE409024 BE787587 AW455209 BM509297 BM794256 BX378566 CN481838 BQ065805 AA314797 BG927443 BE866597 BE618985 BE872964 BE782689 F24104 CF128219 BE879149 BF125785 BG327165 AV726598 BU175684 AV705768 BQ286309 AW162904 AA329849 BE379330 AA827416 BF036908 BE542384 BG030209 BE392802 BM749172 BG121895 BF338612 BQ777051 BG397661 AW515656 CD247402 BF796788 BV174637 BM051474 BM710695 BQ424164 BE278207 BF037814 BX345734 BQ776400 BG753155 BG767696 AA373817 CD386139 BQ884193 BM457681 BM798447 BG773327 BE566683 BF972602 D55806 BC022444 BC032299 BG165289 BF308065 AA316342 BP347885 BF305227 BF308875 BM753856 AV751759 BI855778 BG481192 AJ710683 BE786555 CD243038 CA405655 CK004108 BM051349 BG821483 AA313672 BX432532 BQ233479 AJ705797 BM789377 BE782230 BQ220065 BU951179 BG685238 BX373119 BG756377 CF454440 BG826562 BE540661 BE728217 AI955638 BE880474 AA311713 AW954712 BG685750 BG327434 CD513919 BE880286 BE048108 BG661276 AA366632 BI858114 AA328827 BE874936 BC020679 BG768286 BE560923 BE790626 BU172275 AA879167 BE744329 BM046195 AW404503 T39807 BM905021 BF344108 BQ269461 BP375694 BG743142 BG252635 BG334021 BX403939 BG697466 BF026726 BP367958 CB115088 F32690 AA360021 BE783225 BG566899 CF128104 BU074733 AJ712438 AW850395 AW859802 BC070195 BF672617 BM510391 BI223512 BG779138 BF974485 BM745833 AW406433 X69391 BF305761 BQ227694 BU594965 BE783805 BE612821 BG773571 CB135402 CA843359 BE258515 BG821345 BE252000 AW406130 BE786822 BQ424450 AF261087 BG396281 AW407455 AA359759 BM457904 BG744161 BI086643 AW405919 AA373978 AA661671 AV763841 D55297 CF126778 BE151939 AV657723 BG757239 BG684743 BM083559 F35500 BE299740 BI193826 AA720797 CA942096 BE727726 BI857774 BE780095 BX476441 CB123044 AA370411 BQ690785 BG678040 BE394053 AW407040 BU951095 AJ711805 CF126572 CB144127 BE547810 AW956502 BG256274 BQ083113 AV727931 BG760941 BG746461 CF128487 AA340158 CF130806 BI856147 BE409740 BG828401 BX410406 BI226089 BI713768 BG828861 BM271922 CB134120 BI712616 AA316262 BI226799 BE392189 AA336355 AW328321 BG757564 S71022 CA867618 BI091631 BG655015 BU664970 BM854690 CF128511 BP871435 BQ270084 BQ272056 BU951535 BG111681 AA296470 BI825198 CD697839 AW675430 BE799725 BE395513 BI087195 BE388310 AI831221 BG332421 AV707604 AA373912 BG756451 AA372767 AW405416 BF032905 BC031009 BG341756 AW407055 BF968762 BG825415 AW404624 AA354367 AW850366 BM845979 T91471 H62625 BG926585 AA156257 BM999291 BE871738 CD250805 BU790376 BG897057 BE545055 BF670572 BE263638 AW238330 AA306988 AA149988 BE619455 BE397976 BF310936 BF696954 AA301065 BG476062 BQ694043 BG028624 CD610057 BG822780 BG167861 AW675037 AW366767 BE173568 BF028301 CF618833 CD579570 AA358229 BE563916 W39545 BF961290 AW601923 BI869132 BG118396 AJ715204 AA352096 BE091195 AW390394 AA095439 D55513 CB270206 Z20909 BG826467 BE560282 CA407094 CD610056 BE384601 AA046134 BF694640 AI521633 BE394554 F27905 D54908 AA373027 AA313502 BE960619 AA468374 AA334734 AA373249 BE882419 AW379895 AV721194 BQ225164 BE792316 N85688 BU169449 BE729710 AA188440 BF821563 AA862187 AA320768 BE207164 BE564678 BE264590 AA374467 BU533638 BE796138 CA777568 BU785977 BG714539 BF175600 BU660549 BE251153 AA700704 BF669788 CB146899 BI093036 D52939 AA362520 BG722198 Z20287 BF849649 CA773236 BI856192 AW390392 BE564310 AW249430 BF313567 BF102797 BE871848 D53871 BE268327 BU564510 BQ304235 BE298116 AA130983 BF667032 CB268694 BF965435 BM006707 D57217 BU194640 AA330383 AW954651 BE865632 BE960887 AW406728 BE315022 CA841963 BE567926 BM913720 BQ361220 AA079452 AA115153 AA379363 AW020747 BQ082592 AJ573157 BM172054 AA320318 BM997946 AI432978 BM755144 BE541000 BM759945 AA653816 AA143215 CD579205 CB177179 AA167296 C03293 AA292983 BG495166 T72271 AA310597 AW406768 AA342140 R57773 W94382 CD356605 CB116127 BG568308 AA361584 BF131332 BQ694567 AA353692 BE568322 AA313858 AW404969 BF103647 BX413572 CA772686 AV748572 AW363159 BF033194 BE746760 BP375692 BE865948 BE562517 C05407 AA152145 BE549066 AV734669 AA468392 AA191251 AI654390 AA970586 AA379220 BG654377 BM352824 BE865589 BM313114 BQ060090 BQ334073 AA373149 CB069357 BF028365 AA337676 AW408178 AW408193 D53743 BM264293 CD610055 AA352130 BI792035 H45861 BU932286 CF140202 BQ878702 BF082874 BM720179 BM707890 AV716690 AA338273 BG333452 AA808814 AW405927 BG253454 BF304553 BE336720 BM468015 BE560601 AA379226 AA078972 AA074808 BG527675 N98586 BF700727 BE786811 BE515213 BM010417 AV722506 AW390393 BE296219 BX343081 AW248335 BX452785 CB135157 AA384292 BG899559 AA398310 BX363106 BF571858 BG654468 CD610059 CD692365 AA369803 BF965182 BI439134 BG534571 BE882764 AV749849 AJ706134 AW601826 BM793994 BG928908 BU963468 BQ361257 BG928926 BF807524 AA075630 BF203929 AA329161 AA180350 N86059 AA180079 BF696278 AW936037 BF772095 AA143069 BF973878 BU935383 BE872147 BF961319 AA225385 BF734565 CA773216 AJ715005 CD690546 AW390397 AI282946 BF175078 BF082863 CD610054 BF126135 BU156921 AV754961 AA090109 BE409933 AI654527 N89262 AV703928 BE896638 BE566513 BU790386 BI047041 AW814743 AI567092 BE788465 AA379288 AA188040 BF211063 CA778207 BQ212969 BG897050 R02186 AW089213 AA094763 BE971220 AW853175 BI055082 CD579678 AA131212 AA364586 AA248368 BM794841 BF215911 BU941710 AA581731 AW853164 BQ213795 BM798352 AA180034 CA942094 BI868897 BU949930 AA493694 BU932756 BF695884 AA129461 CD688732 AA220197 AA149690 AA158807 BE714671 AA988235 D53533 BM854457 BI046966 CD704270 AW238226 AW591628 AW866848 BM019635 AA082513 AA467745 CB218754 BU566526 BE884278 BE440207 BE539628 BF132859 H24605 BF699121 BP432625 AA075837 BG899027 BF029572 CD610080 AA971421 BF668798 AA617981 CD610076 F01236 AI336509 AW604357 AW581035 BM752273 BG425514 BF734142 CB219845 BU599124 AW629896 AA009767 AA191713 C03859 BF305932 BG390866 BE564710 BU502677 AI890017 AW408351 BE258696 CD299586 AA975180 AV751592 AW581054 AI469547 BQ331597 BM905124 N84604 CD610063 R57151 BM810057 CD579325 BE295958 AA482983 BF171199 BF369533 AW363620 CD610066 BE882955 BQ640572 BE173531 BF830438 AW578423 CD523137 AW581067 BF171474 CF131030 BE622918 AJ712470 H49617 BG107548 T55475 BF027817 BE566361 AW247003 CD610052 AV716999 CN483782 AW581057 BI438211 N87607 AW615006 AA102057 AA081183 AA747382 AA320497 CD688935 D55533 AW577068 BM823978 BI045263 AJ572833 AV726187 BI045446 AA379410 BG567355 BE565833 BF218164 N66448 BU963237 BF691442 BE567552 BQ325734 BI045322 BG113171 CB219812 CD610062 AW440755 CD610053 D55754 AA022939 AW581081 AJ713857 BI055065 AW889701 BU587686 AW794488 AW238504 AI262870 AW805227 BM478270 C02650 CD610070 N84969 AA082496 AA248346 BQ361255 BF798686 AV750359 CD610075 BQ331512 BF806018 AA034245 CD610081 CD610068 AV743399 BF849929 CA848427 CA952661 BI033141 AW580986 BE539223 AA308147 CD357530 AA661987 CD579328 N89076 AW577490 N83754 CD610074 BF357893 BF852559 CD610072 AW957562 AA329318 AW364686 BI055072 H97574 BE567968 CD610071 AW581070 BE763497 R89249 CD610060 BF815307 CD610078 BQ286476 BI015099 CD610065 BF988533 AW386810 N85151 AA090211 AA161090 CD610069 BE960626 CD610064 CD610079 AW580989 BU960493 CB177364 BF090430 Z20042 AW364687 BF369526 CD610067 BG927755 BF308903 CD610077 C18918 BM782772 AA094879 BI089111 AA187973 BE866431 AW373968 AW799857 BU176292 AA164798 AI525466 BU537484 BF154459 BI045290 CA841305 BI197251 BQ231374 BF172491 AW373964 BE535420 BG742203 T55422 BQ339803 BF766422 BE769381 BF247826 AA285335 BF238208 AW577075 AA729204 BF808391 BF697256 AA092558 BG280931 BF993959 AI524964 BI050852 AA081657 BF229508 BU934575 BU945002 AA092186 BI194833 AA211766 AA157629 BG031132 BF680526 BF337007 AW672681 T73045 AA917624 AW373965 BU176207 AA971162 BI094344 BF448650 BE567696 BU181130 CD610073 AA091222 AA523475 AA128838 AW804305 AA545794 AW577076 BF837350 BE069068 AA091158 BQ325211 BQ366340 N85963 BQ372598 AA095360 BG165838 BE561211 BE940186 BF336989 AI872427 BF798684 AW937080 AA247954 BG494295 BF337013 AW373966 BF090450 CB999990 N86978 AW890396 BI044453 AA602392 BF082872 AW605277 AW373970 BF734452 AW373959 BE568924 AW750004 BE815057 BM809151 BF837344 AW059893 AI783543 BE973699 BF381596 T78884 BQ646641 AI905619 BF096221 BF671887 BG529970 T57867 BU500861 BE788099 AI909089 AW372931 AA864966 BU532287 BF841071 BU929664 CD102374 AI630048 CF597065 W00410 BF989512 BG422223 BI862146 AA652844 BM797750 CD523292 GeneLoc Exon Structure
|
Expression for PTPN11 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| PTPN11 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this imageBioGPS CGAP TAG: TAAATGTTGA
About this image See PTPN11 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PTPN11
SOURCE GeneReport for Unigene cluster: Hs.506852 UniProtKB/Swiss-Prot: PTN11_HUMAN, Q06124Tissue specificity: Widely expressed, with highest levels in heart, brain, and skeletal muscle SABiosciences Expression via Pathway-Focused PCR Arrays including PTPN11:
Primer Products: |  | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PTPN11 Browse OriGene validated miRNA SYBR primer pairs
| |  | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat PTPN11 | |  | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PTPN11 | |  | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PTPN11 | In Situ Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTPN11 |
Orthologs for PTPN11 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of animals.
Orthologs for PTPN11 gene from 6/21 species (see all 21) About this table
| Organism |
Taxonomic classification |
Gene |
Description |
Human Similarity |
Orthology Type |
Details |
chicken (Gallus gallus) |
Aves |
PTPN111 |
protein tyrosine phosphatase, non-receptor type 11 |
85.33(n) 98.31(a) |
  |
395815 NM_204968.1 NP_990299.1 |
lizard (Anolis carolinensis) |
Reptilia |
PTPN116 |
-- |
97(a) |
1 ↔ 1 |
GL343282.1(325780-343622) |
African clawed frog (Xenopus laevis) |
Amphibia |
Xl.9362 |
Xenopus laevis phosphotyrosyl-protein phosphatase mRNA, more |
82.68(n) |
  |
U15287.1 |
zebrafish (Danio rerio) |
Actinopterygii |
wufi24f032 |
wufi24f03 |
78.16(n) |
  |
333979 BC045328.1 |
fruit fly (Drosophila melanogaster) |
Insecta |
csw1 , 3 |
EGF receptor signaling pathway protein tyrosine more3 corkscrew1 |
66(a)3 60.95(n)1 66.1(a)1 |
  |
452781 NM_057782.31 NP_477130.11 |
worm (Caenorhabditis elegans) |
Secernentea |
ptp-21 , 3 |
PROTEIN-TYROSINE PHOSPHATASE3 Protein Tyrosine Phosphatase1 |
37(a) (best of 3)3 50.63(n)1 44.31(a)1 |
  |
II(5918677-5920933)3 1740031 NM_062783.41 NP_495184.11 |
ENSEMBL Gene Tree for PTPN11 (if available) TreeFam Gene Tree for PTPN11 (if available)  |
Paralogs for PTPN11 gene(Paralogs according to
1HomoloGene, 2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68) About This Section
| Paralogs for PTPN11 gene
- PTPN72 PTPRH2 PTPN222 PTPRO2 PTPN62 PTPRJ2 PTPRQ2 PTPN182
- PTPN122 PTPN52 PTPRB2 PTPRR2
18/19 SIMAP similar genes for PTPN11 using alignment to 6 protein entries: PTN11_HUMAN (see all proteins)
(see all similar genes):PTPN6 GRB2 NCK1 GRAP2 VAV3 SHF RASA1 CLNK CSK VAV1 PIK3R3 SH2B2 HCK SHC4 MATK FYN LCK SYK
PTPN11 for paralogs About GeneDecksing
5/6 Pseudogenes.org Pseudogenes for PTPN11 (see all 6) PGOHUM00000244574 PGOHUM00000237709 PGOHUM00000245615 PGOHUM00000235162 PGOHUM00000243393
|
Genomic Variants for PTPN11 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical significance | Chr 12 pos | Sequence | # | AA Chg | Type | More | # | Allele freq | Pop | Total sample | More |
|---|
HapMap Linkage Disequilibrium report for PTPN11 (112856155 - 112947717 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for PTPN11: -- Human Gene Mutation Database (HGMD): PTPN11
 | 5/16 SABiosciences Cancer Mutation PCR Assays for PTPN11 (see all 16): |
 | 5/6 SABiosciences Cancer Mutation PCR Arrays containing PTPN11 (see all 6): |
|  | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PTPN11 |
|
Disorders
/ Diseases for PTPN11 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database, Novoseek,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
PTPN11 for disorders About GeneDecksing
OMIM gene information: 176876 OMIM disorders: 163950 151100 607785 156250 UniProtKB/Swiss-Prot: PTN11_HUMAN, Q06124
Defects in PTPN11 are the cause of LEOPARD syndrome type 1 (LEOPARD1) [MIM:151100]. It is an autosomaldominant disorder allelic with Noonan syndrome. The acronym LEOPARD stands for lentigines, electrocardiographicconduction abnormalities, ocular hypertelorism, pulmonic stenosis, abnormalities of genitalia, retardation of growth,and deafness Defects in PTPN11 are the cause of Noonan syndrome type 1 (NS1) [MIM:163950]. Noonan syndrome (NS) is adisorder characterized by dysmorphic facial features, short stature, hypertelorism, cardiac anomalies, deafness, motordelay, and a bleeding diathesis. Some patients with Noonan syndrome type 1 develop multiple giant cell lesions of thejaw or other bony or soft tissues, which are classified as pigmented villomoduolar synovitis (PVNS) when occurring inthe jaw or joints. Note=Mutations in PTPN11 account for more than 50% of the cases. Rarely, NS is associated withjuvenile myelomonocytic leukemia (JMML). NS1 inheritance is autosomal dominant Defects in PTPN11 are a cause of juvenile myelomonocytic leukemia (JMML) [MIM:607785]. JMML is a pediatricmyelodysplastic syndrome that constitutes approximately 30% of childhood cases of myelodysplastic syndrome (MDS) and2% of leukemia. It is characterized by leukocytosis with tissue infiltration and in vitro hypersensitivity of myeloidprogenitors to granulocyte-macrophage colony stimulating factor Defects in PTPN11 are a cause of metachondromatosis (MC) [MIM:156250]. It is a skeletal disorder withradiologic fetarures of both multiple exostoses and Ollier disease, characterized by the presence of multipleenchondromas and osteochondroma-like lesions 20/117 diseases for PTPN11 (see all 117): About MalaCardsnoonan syndrome cafe-au-lait spots acute myeloid leukemia noonan-like/multiple giant cell lesion syndrome myeloid leukemia noonan syndrome 1 neurofibromatosis-noonan syndrome leukemia hydrops fetalis dengue hemorrhagic fever pulmonary valve stenosis hypersensitivity reaction type ii disease juvenile myelomonocytic leukemia myelomonocytic leukemia patent ductus arteriosus leopard syndrome hemorrhagic fever developmental disabilities short stature pulmonic stenosis
10 diseases from the University of Copenhagen DISEASES database for PTPN11:Noonan syndrome LEOPARD syndrome Juvenile myelomonocytic leukemia Pulmonary valve stenosis Costello syndrome Hypertrophic cardiomyopathy Congenital heart defect Leukemia Cryptorchidism Gastritis 10/85 Novoseek disease relationships for PTPN11 gene (see all 85) About this table
| Disease |
-log (P-Val) |
Hits |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| noonan syndrome |
96.2 |
192 |
17020470 (4), 18348260 (4), 12161469 (4), 15985475 (3) (see all 99) |
| leopard syndrome |
93.4 |
63 |
15690106 (4), 16679933 (3), 14991917 (3), 16208280 (2) (see all 38) |
| juvenile myelomonocytic leukemia |
90.3 |
32 |
15928039 (2), 15604238 (2), 12717436 (2), 15211660 (2) (see all 26) |
| cfc syndrome |
88.7 |
10 |
18651097 (2), 12384786 (2), 12529707 (2), 20052757 (1) (see all 6) |
| neurofibromatosis-noonan syndrome |
82.8 |
3 |
17020470 (2), 19449407 (1) |
| lentigines |
79.1 |
5 |
19582499 (1), 15470362 (1), 16733669 (1), 18470943 (1) (see all 5) |
| short stature |
77.6 |
15 |
15985475 (1), 16498234 (1), 16804314 (1), 20383758 (1) (see all 15) |
| heart defects congenital |
70.3 |
12 |
18203203 (3), 16461457 (2), 12960218 (1), 20461756 (1) (see all 9) |
| pulmonary valve stenosis |
66.1 |
6 |
11992261 (1), 18678287 (1), 12522798 (1), 17515436 (1) (see all 5) |
| x-linked lymphoproliferative syndrome |
65.1 |
1 |
11313386 (1) |
GeneTests: PTPN11 LEOPARD SyndromeNoonan Syndrome Genetic Association Database (GAD): PTPN11 Human Genome Epidemiology (HuGE) Navigator: PTPN11 (48 documents) Export disorders for PTPN11 gene to outside databases
|
Publications for PTPN11 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for PTPN11 gene, integrated from 9 sources (see all 1200): (articles sorted by number of sources associating them with PTPN11) | |  | Utopia: connect your pdf to the dynamic world of online information |
- Identification of a human src homology 2-containing protein-tyrosine-phosphatase: a putative homolog of Drosophila corkscrew. (PubMed id 1280823)1, 2, 3, 9 Freeman R.M....Neel B.G. (1992)
- PTPN11 mutations in Noonan syndrome: molecular spectrum, genotype- phenotype correlation, and phenotypic heterogeneity. (PubMed id 11992261)1, 2, 4, 9 Tartaglia M.... Gelb B.D. (2002)
- PTPN11 (protein tyrosine phosphatase, nonreceptor type 11) mutations and response to growth hormone therapy in children with Noonan syndrome. (PubMed id 15956085)1, 4, 9 Ferreira L.V....Jorge A.A. (2005)
- Salicylic acid based small molecule inhibitor for the oncogenic Src homology-2 domain containing protein tyrosine phosphatase-2 (SHP 2). (PubMed id 20170098)1, 2, 9 Zhang X....Zhang Z.Y. (2010)
- PTPN11, SOS1, KRAS, and RAF1 gene analysis, and genotype-phenotype correlation in Korean patients with Noonan syndrome. (PubMed id 19020799)1, 2, 9 Ko J.M....Yoo H.W. (2008)
- Genetic heterogeneity in LEOPARD syndrome: two families with no mutations in PTPN11. (PubMed id 15690106)1, 2, 9 Kalidas K.... Jeffery S. (2005)
- Acute myelomonocytic leukemia in a boy with LEOPARD syndrome (PTPN11 gene mutation positive). (PubMed id 16679933)1, 2, 9 Ucar C.... Heinritz W. (2006)
- Structural and functional dissection of the cytoplasmic domain of the transmembrane adaptor protein SIT (SHP2-interacting transmembrane adaptor protein). (PubMed id 11433379)1, 2, 9 Pfrepper K.-I.... Schraven B. (2001)
- Nuclear protein tyrosine phosphatase Shp-2 is one important negative regulator of nuclear export of telomerase reverse transcriptase. (PubMed id 18829466)1, 2, 9 Jakob S.... Haendeler J. (2008)
- The mutational spectrum of PTPN11 in juvenile myelomonocytic leukemia and Noonan syndrome/myeloproliferative disease. (PubMed id 15928039)1, 4, 9 Kratz C.P....Loh M.L. (2005)
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External Searches for PTPN11 gene
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
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Genome Databases showing PTPN11 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
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Other Databases showing PTPN11 gene
(According to HUGE)
About This Section
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Specialized Databases showing PTPN11 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
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About This Section
| Patent Information for PTPN11 gene: Search GeneIP for patents involving PTPN11
GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Products for PTPN11 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
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| | | | OriGene Antibodies for PTPN11 | | OriGene shRNA RFP for PTPN11 | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PTPN11 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PTPN11 | | Browse OriGene Protein Over-expression Lysates | | Browse OriGene Fluorogenic Cell Assay Kits | | OriGene siRNA for PTPN11 | | OriGene 3'-UTR Clone for PTPN11 | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PTPN11 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PTPN11 | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | OriGene Purified Protein for PTPN11 | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | OriGene Custom Antibody Services for PTPN11 | | OriGene Custom Protein Services for PTPN11 | | OriGene Custom Immunoassay Development | | |
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| | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PTPN11 | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PTPN11 | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PTPN11 | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PTPN11 | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PTPN11 | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PTPN11 |
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| Antibodies & Assays for PTPN11  (SHP-2) |
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| | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTPN11 |
|  |  |  | | | ThermoFisher Antibodies for PTPN11 |
| | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PTPN11 |
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