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Aliases for PTMAP4 Gene

Aliases for PTMAP4 Gene

  • Prothymosin, Alpha Pseudogene 4 2 3 5
  • Prothymosin, Alpha Pseudogene 4 (Gene Sequence 112) 2 3
  • Prothymosin Alpha 3
  • PTMA 3

External Ids for PTMAP4 Gene

Previous GeneCards Identifiers for PTMAP4 Gene

  • GC00U990292
  • GC12U900044
  • GC12M009293
  • GC12M009283
  • GC12M009391

Summaries for PTMAP4 Gene

GeneCards Summary for PTMAP4 Gene

PTMAP4 (Prothymosin, Alpha Pseudogene 4) is a Pseudogene.

Additional gene information for PTMAP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PTMAP4 Gene

Genomics for PTMAP4 Gene

Regulatory Elements for PTMAP4 Gene

Enhancers for PTMAP4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H009244 0.7 ENCODE 0.7 -3.9 -3884 0 SOX5 SOX13 GATAD2A ZNF511 FOXA3 ZNF384 THRB ZGPAT CREB1 BCL6 LOC642846 PZP LOC728715 ENSG00000256427 PTMAP4
GH12H009240 0.4 ENCODE 0.7 +0.1 109 0 RAD21 YY1 DDX12P PZP LOC642846 PTMAP4 LINC00987
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PTMAP4 on UCSC Golden Path with GeneCards custom track

Promoters for PTMAP4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000048594 96 801 RAD21 YY1

Genomic Location for PTMAP4 Gene

Chromosome:
12
Start:
9,239,326 bp from pter
End:
9,240,496 bp from pter
Size:
1,171 bases
Orientation:
Minus strand

Genomic View for PTMAP4 Gene

Genes around PTMAP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PTMAP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PTMAP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PTMAP4 Gene

Proteins for PTMAP4 Gene

Post-translational modifications for PTMAP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PTMAP4 Gene

Domains & Families for PTMAP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PTMAP4 Gene

Function for PTMAP4 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for PTMAP4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PTMAP4 Gene

Localization for PTMAP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PTMAP4 Gene

Pathways & Interactions for PTMAP4 Gene

SuperPathways for PTMAP4 Gene

No Data Available

Interacting Proteins for PTMAP4 Gene

Gene Ontology (GO) - Biological Process for PTMAP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PTMAP4 Gene

Drugs & Compounds for PTMAP4 Gene

No Compound Related Data Available

Transcripts for PTMAP4 Gene

mRNA/cDNA for PTMAP4 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for PTMAP4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for PTMAP4 Gene

No ASD Table

Relevant External Links for PTMAP4 Gene

GeneLoc Exon Structure for
PTMAP4
ECgene alternative splicing isoforms for
PTMAP4

Expression for PTMAP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PTMAP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of PTMAP4 Gene:

PTMAP4
genes like me logo Genes that share expression patterns with PTMAP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PTMAP4 Gene

Orthologs for PTMAP4 Gene

Evolution for PTMAP4 Gene

ENSEMBL:
Gene Tree for PTMAP4 (if available)
TreeFam:
Gene Tree for PTMAP4 (if available)

No data available for Orthologs for PTMAP4 Gene

Paralogs for PTMAP4 Gene

No data available for Paralogs for PTMAP4 Gene

Variants for PTMAP4 Gene

Relevant External Links for PTMAP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PTMAP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PTMAP4 Gene

Disorders for PTMAP4 Gene

Relevant External Links for PTMAP4

Genetic Association Database (GAD)
PTMAP4

No disorders were found for PTMAP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PTMAP4 Gene

Publications for PTMAP4 Gene

  1. The human prothymosin alpha gene family contains several processed pseudogenes lacking deleterious lesions. (PMID: 1612591) Manrow RE … Berger SL (Genomics 1992) 2 3 60
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 45 60
  3. [New intronless members of human prothymosin alpha genes]. (PMID: 8592501) Rubtsov IuP … Vartapetian AB (Molekuliarnaia biologiia 1995) 3 60
  4. Isolation and partial sequencing of the human prothymosin alpha gene family. Evidence against export of the gene products. (PMID: 2708378) Eschenfeldt WH … Berger SL (The Journal of biological chemistry 1989) 3 60

Products for PTMAP4 Gene

Sources for PTMAP4 Gene

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