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Aliases & Descriptions for PTHLH
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases HHM 1 , 2 MGC14611 2 PLP 1 , 2 PTH-rP 3 PTHR 1 , 2 PTHRP 1 , 2 , 3 PTHrP 3 osteostatin 2
Descriptions PTH-related protein 2 humoral hypercalcemia of malignancy 2 parathyroid hormone-like hormone 2 parathyroid hormone-like protein 2 parathyroid hormone-like related protein 2 parathyroid hormone-related protein 2 parathyroid-like protein 2
Search outside databases for aliases for PTHLH genePrevious GC identifers: GC12M028487 GC12M028138 GC12M028011 GC12M028006
Summaries for PTHLH (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for PTHLH : The protein encoded by this gene is a member of the parathyroid hormone family. This hormoneregulates endochondral bone development and epithelial-mesenchymal interactions during theformation of the mammary glands and teeth. This hormone is involved in lactation possibly byregulating the mobilization and transfer of calcium to the milk. The receptor of this hormone,PTHR1, is responsible for most cases of humoral hypercalcemia of malignancy. Four alternativelyspliced transcript variants encoding two distinct isoforms have been observed. There is alsoevidence for alternative translation initiation from non-AUG (CUG and GUG) start sites, in-frameand downstream of the initiator AUG codon, to give rise to nuclear forms of this hormone.[provided by RefSeq] UniProtKB/Swiss-Prot: PTHR_HUMAN, P12272 Function : Osteostatin is a potent inhibitor of osteoclastic bone resorption
Gene Wiki entry for PTHLH (Parathyroid_hormone-related_protein)
Genomic Location for PTHLH
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the PTHLH gene Entrez Gene cytogenetic band: 12p12.1-p11.2 Ensembl cytogenetic band: 12p11.22 HGNC cytogenetic band: 12p12.1-p11.2 PTHLH Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12M028002:
(about GC identifiers )
Start:
28,002,284 bp from pter
End:
28,016,183 bp from pter
Size:
13,900 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000012.10 NT_009714.16 Proteins for PTHLH
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: PTHR_HUMAN, P12272 (See
protein sequence )Recommended Name: Parathyroid hormone-related protein precursor Size : 177 amino acids; 20194 Da
Subcellular location : Cytoplasm. Nucleus. Secreted
PDB structures from and Proteopedia : 1BZG (3D)
 1ET3 (3D)
 1M5N (3D)
 3FFD (3D)
 
Secondary accessions : Q15251Alternative splicing : 3 isoforms : P12272-1 P12272-2 P12272-3 (Additional isoforms seem to exist)
Post-translational modifications:
There are 3 principal secretory forms, called PTHrP[1-36], PTHrP[38-94], and osteostatin(PTHrP[107-139]) arising from endoproteolytic cleavage of the initial translation product. Each ofthese secretory forms is believed to have one or more of its own receptors that mediates thenormal paracrine, autocrine and endocrine actions1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (4 alternative transcripts):
NP_002811.1 NP_945315.1 NP_945316.1 NP_945317.1 ENSEMBL proteins: ENSP00000346398 ENSP00000201015 ENSP00000379209 ENSP00000379213 Human Recombinant Proteins                OriGene Purified Recombinant Human Proteins (see all 3 ): PTHLH 5 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for PTHLH: Assays for PTHLH:
Protein
Domains/ Families for PTHLH(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P12272 ProtoNet protein and cluster: P12272
1 Blocks protein family : IPB001415 Parathyroid hormone UniProtKB/Swiss-Prot: PTHR_HUMAN, P12272 Similarity : Belongs to the parathyroid hormone family
Gene Function for PTHLH
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5 ): NM_198964 Applied Biosystems Silencer ® siRNAs for PTHLH Sigma-Aldrich siRNA and siRNA Panels for PTHLH Sigma-Aldrich shRNA for PTHLH Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_002820                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_002820                                  untagged cDNA clones in CMV expression vector (see all 5 ): J03580  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_198965 UniProtKB/Swiss-Prot: PTHR_HUMAN, P12272 Function : Neuroendocrine peptide which is a critical regulator of cellular and organ growth,development, migration, differentiation and survival and of epithelial calcium ion transport.Regulates endochondral bone development and epithelial-mesenchymal interactions during theformation of the mammary glands and teeth Function : Osteostatin is a potent inhibitor of osteoclastic bone resorption
Genatlas biochemistry entry for PTHLH :parathyroid hormone-like hormone,expressed by pancreatic islet cells,putatively involved in theregulation of insulin secretion
15/22 MGI mutant phenotypes (inferred from 6 alleles ) (MGI details for Pthlh) (see all 22
):2 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for PTHLH
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for PTHLH 5/47 Interacting proteins for PTHLH (ENSP00000346398 3 ) via UniProtKB, MINT, and/or STRING (see all 47
)About this table 5/15 Gene Ontology (GO) biological process terms (links to tree view) (see all 15
):
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Drugs & Compounds for PTHLH (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for PTHLH 10/50 Novoseek chemical compound relationships for PTHLH gene (see all 50
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
calcium
76.47
710
16006777 (7), 18096456 (6), 8156530 (6), 8018531 (5) (see all 99 )
pck-3145
66.95
5
16222145 (3), 15289344 (1)
1,25 dihydroxy vitamin d3
63.12
41
16794368 (4), 8462465 (2), 8359229 (2), 17904173 (2) (see all 24 )
cyclic amp
55.95
39
8312363 (3), 8319205 (3), 2108793 (2), 8328312 (2) (see all 25 )
forskolin
54.05
27
9175633 (2), 8380405 (2), 10352098 (1), 10548524 (1) (see all 15 )
trifluoroethanol
39.10
2
8138348 (1)
ag-1296
37.60
3
15219850 (1), 15336602 (1)
thymidine
36.10
16
11891011 (2), 12230264 (2), 7599071 (1), 11517192 (1) (see all 14 )
phosphorus
35.46
11
16160737 (2), 8627105 (1), 7640009 (1), 12683897 (1) (see all 7 )
pyridinoline
27.82
1
12794841 (1)
About this table
Transcripts for PTHLH(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5 ): NM_198964 Sigma-Aldrich siRNA and siRNA Panels for PTHLH Sigma-Aldrich shRNA for PTHLH Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_002820 NM_198964 NM_198965 NM_198966
REFSEQ mRNAs for PTHLH gene (4 alternative transcripts): NM_002820.2 NM_198964.1 NM_198965.1 NM_198966.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002820 NM_198964 NM_198965 NM_198966
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_002820                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_002820                                  untagged cDNA clones in CMV expression vector (see all 5 ): J03580  
Additional cDNA sequence: AK313476.1 BC005961.1 BT007178.1 CR541882.1 J03580.1 J03802.1 M26958.1 M26959.1
9 DOTS entries : DT.40297109 DT.100745590 DT.101979164 DT.91712557 DT.95270704 DT.95270703 DT.121164115 DT.121164170 DT.95270705
24/62 AceView cDNA sequences (see all 62
):AA453402 CR541882 NM_002820 NM_198966 BF155666 BG680355 CK903432 BF447014 M34071 NM_198965 BI963162 NM_198964 AA158170 AA845432 AA374372 BG678818 BG676028 BG680295 AW845113 AI784672 BG679319 CF454324 BT007178 BM924176
highest scoring ESTs for PTHLH :BC005961 BF541944 BG678065 BG678818 BG680295 BG680355 BI752853 J03802 M26959 AA131693
Unigene Cluster for PTHLH: Parathyroid hormone-like hormone Hs.591159 [show with all ESTs ] Unigene Representative Sequence: J03580 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for PTHLH ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b · 4c · 4d ^ 5 ^ 6a · 6b · 6c · 6d ^ 7 ^ 8 SP1 :     -   -       -                 SP2 :             -           -       SP3 :       -       -                 SP4 :                            
About this scheme ECgene alternative splicing isoforms for PTHLH 4 Ensembl transcripts including schematic representations : ENST00000354417
ENST00000201015
ENST00000395868
ENST00000395872
Expression for PTHLH
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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PTHLH expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for PTHLH 1 / 2 / 3
8 probe-sets matching PTHLH gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TAAAAATAACSOURCE GeneReport for Unigene cluster: Hs.591159 Expression variation in blood from EXPOLDB for PTHLH
UniProtKB/Swiss-Prot: PTHR_HUMAN, P12272 Tissue specificity : Ubiquitous. Also expressed in the mammary gland
Orthologs for PTHLH
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for PTHLH gene from 5/7 species (see all 7
)
About this table Species with no ortholog for PTHLH ENSEMBL Gene Tree for PTHLH Paralogs for PTHLH (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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SNPs/Variants for PTHLH (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for PTHLH (up to first 250kb)
Disorders & Mutations for PTHLH
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 168470 UniProtKB/Swiss-Prot: PTHR_HUMAN, P12272
Produced by many tumors from patients with HHM (humoral hypercalcemia of malignancy)
10/94 Novoseek disease relationships for PTHLH gene (see all 94
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
hypercalcemia
96.72
1412
1424212 (6), 8453901 (6), 10660809 (6), 1434529 (5) (see all 99 )
osteolytic
84.04
92
8833902 (4), 16813525 (3), 10898330 (3), 7754638 (2) (see all 51 )
bone metastases
81.81
137
1782489 (7), 10861577 (7), 19139120 (5), 11741801 (5) (see all 50 )
paraneoplastic syndromes
77.81
25
11911944 (1), 14613038 (1), 16022632 (1), 7768974 (1) (see all 17 )
hyperparathyroidism primary
72.66
25
1424212 (2), 1449040 (2), 2056982 (2), 8060769 (2) (see all 18 )
osteolysis
72.45
33
10898332 (2), 11701443 (2), 11996903 (2), 16885353 (2) (see all 21 )
bone destruction
70.76
21
9362422 (2), 9362421 (1), 10548524 (1), 8833902 (1) (see all 17 )
tumors
60.72
741
11893937 (7), 7754638 (6), 2293655 (6), 8004587 (6) (see all 99 )
pseudohypoparathyroidism, type ib
60.33
1
9100569 (1)
metastasis
59.53
225
9362424 (8), 14696114 (5), 8003863 (5), 8752176 (4) (see all 99 )
About this table Human Gene Mutation Database : PTHLH Human Genome Epidemiology Navigator: PTHLH (3 documents)
Medical News for PTHLH (Possibly Related Articles in
Doctor's Guide )
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Publications for PTHLH (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/1088 PubMed articles for PTHLH gene (see all 1088
): Characterization of the human parathyroid hormone-like peptide gene. Functional and evolutionary aspects. (PubMed id 2708388) 2, 3, 4 Yasuda T.... Goltzman D. (1989) Parathyroid hormone-related protein (PTHrP): a nucleocytoplasmic shuttling protein with distinct paracrine and intracrine roles. (PubMed id 12852260) 1, 3, 4 Jans D.A.... Gillespie M.T. (2003) Molecular dissection of the importin beta1-recognized nuclear targeting signal of parathyroid hormone-related protein. (PubMed id 11401507) 1, 3, 4 Lam M.H.... Jans D.A. (2001) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Minireview: parathyroid hormone-related protein as an intracrine factor -- trafficking mechanisms and functional consequences. (PubMed id 12538599) 3, 4 Fiaschi-Taesch N.M. and Stewart A.F. (2003) Molecular basis for the recognition of a nonclassical nuclear localization signal by importin beta. (PubMed id 12504010) 3, 4 Cingolani G.... Gerace L. (2002) The structure of human parathyroid hormone-related protein(1-34) in near-physiological solution. (PubMed id 10050767) 3, 4 Weidler M....Rosch P. (1999) C-terminal parathyroid hormone-related protein inhibits proliferation and differentiation of human osteoblast-like cells. (PubMed id 9144344) 3, 4 Martinez M.E.... Esbrit P. (1997) Parathyroid hormone-related protein-(107-139) inhibits bone resorption in vivo. (PubMed id 9048639) 3, 4 Cornish J.... Reid I.R. (1997) A potent inhibitor of osteoclastic bone resorption within a highly conserved pentapeptide region of parathyroid hormone-related protein; PTHrP107-111. (PubMed id 1954916) 3, 4 Fenton A.J.... Nicholson G.C. (1991)
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Genome Databases showing PTHLH
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing PTHLH
(According to HUGE )
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Specialized Databases showing PTHLH (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for PTHLH (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for PTHLH:
Search Tocris compounds for PTHLH
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Aliases for PTHLH
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009