PTGS2 Gene
protein-coding GIFtS : 71
GCID: GC01 M186640
prostaglandin-endoperoxide synthase 2 (prostaglandin G/H...
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Aliasesfor PTGS2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Prostaglandin-Endoperoxide Synthase 2 (Prostaglandin G/H Synthase AndCyclooxygenase) 1 2 PGG/HS2 COX21 2 3 PHS-22 Prostaglandin H2 Synthase 22 3 Cyclooxygenase 2b2 COX-22 3 HCox-21 PGHS-22 3 Prostaglandin G/H Synthase 22 PGH Synthase 22 3 Cyclooxygenase-23 PHS II2 3 Prostaglandin-Endoperoxide Synthase 23 EC 1.14.99.13 8 EC 1.14.998 GRIPGHS2
Export aliases for PTGS2 gene to outside databases Previous GC identifers: GC01M184166 GC01M182068 GC01M183160 GC01M183879 GC01M183372 GC01M184907 GC01M157875
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Summariesfor PTGS2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for PTGS2 : Prostaglandin-endoperoxide synthase (PTGS), also known as cyclooxygenase, is the key enzyme in prostaglandin biosynthesis, and acts both as a dioxygenase and as a peroxidase. There are two isozymes of PTGS: a constitutive PTGS1 and an inducible PTGS2, which differ in their regulation of expression and tissue distribution. This gene encodes the inducible isozyme. It is regulated by specific stimulatory events, suggesting that it is responsible for the prostanoid biosynthesis involved in inflammation and mitogenesis. (provided by RefSeq, Feb 2009) UniProtKB/Swiss-Prot: PGH2_HUMAN, P35354 Function : Mediates the formation of prostaglandins from arachidonate. May have a role as a major mediator ofinflammation and/or a role for prostanoid signaling in activity-dependent plasticity summary
for PTGS2 : Cyclooxygenase (also known as COX, Prostaglandin-endoperoxide synthase, Prostaglandin G/H synthase) isexpressed in cells in three isoforms: COX-1, COX-2 and COX-3. COX-1 (constitutive) and COX-2 (inducible)isoforms catalyze the rate-limiting step of prostaglandin production and are the targets of non-steroidalanti-inflammatory drugs. COX-3 does not appear to be involved in inflammatory processes, but seems to beinvolved in pain and fever. COX-3 is thought to be derived through the retention of the highly structured G+ C-rich intron 1 of the COX-1 gene. Gene Wiki entry for PTGS2 PharmGKB "VIP " summary for
PTGS2
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Genomic Viewsfor PTGS2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000001.10 NC_018912.1 NT_004487.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PTGS2 gene promoter: AP-1 ATF-2 POU6F1 (c2) STAT5A CREB deltaCREB FOXJ2 (long isoform) c-Jun FOXJ2 Other transcription factors Search SABiosciences Chromatin IP Primers for PTGS2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PTGS2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 1q25.2-q25.3 Ensembl cytogenetic band: 1q31.1 HGNC cytogenetic band: 1q25.2-q25.3 PTGS2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01M186640: view genomic region
(about GC identifiers )
Start:
186,640,923 bp from pter
End:
186,649,559 bp from pter
Size:
8,637 bases
Orientation:
minus strand
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Proteinsfor PTGS2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: PGH2_HUMAN, P35354 (See
protein sequence )Recommended Name: Prostaglandin G/H synthase 2 precursor Size : 604 amino acids; 68996 Da
Cofactor : Binds 1 heme B (iron-protoporphyrin IX) group per subunit (By similarity)
Subunit : Homodimer (By similarity)
Subcellular location : Microsome membrane; Peripheral membrane protein. Endoplasmic reticulum membrane; Peripheralmembrane protein
Miscellaneous : This enzyme acts both as a dioxygenase and as a peroxidase
Miscellaneous : This enzyme is the target of nonsteroidal anti-inflammatory drugs such as aspirin
1 PDB 3D structure from and Proteopedia for PTGS2 :1V0X (3D)
 
Secondary accessions : A8K802 Q16876Explore the universe of human proteins at neXtProt for PTGS2: NX_P35354 Post-translational modifications:
S-nitrosylation by NOS2 (iNOS) activates enzyme activity. S-nitrosylation may take place on different Cys residues in addition to Cys-5611
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P35354 4/30 DME Specific Peptides for PTGS2 (P35354 ) (see all 30 )PTGS2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_000954.1 ENSEMBL proteins: ENSP00000356438 ENSP00000454130 Reactome Protein details: P35354 Human Recombinant Protein Products: Gene Ontology (GO): 5/8 cellular component terms (GO ID links to tree view) (see all 8 ): About this table
PTGS2 for ontologies About GeneDecksing PTGS2 Antibody Products: Assay Products for PTGS2:
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Protein
Domains / Familiesfor PTGS2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PTGS2 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P35354 ProtoNet protein and cluster: P35354
3 Blocks protein families : IPB002007 Animal haem peroxidase signature IPB006210 Type I EGF IPB010255 Haem peroxidase UniProtKB/Swiss-Prot: PGH2_HUMAN, P35354 Similarity : Belongs to the prostaglandin G/H synthase familySimilarity : Contains 1 EGF-like domain
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Functionfor PTGS2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: PGH2_HUMAN, P35354 Function : Mediates the formation of prostaglandins from arachidonate. May have a role as a major mediator ofinflammation and/or a role for prostanoid signaling in activity-dependent plasticity Catalytic activity : Arachidonate + AH(2) + 2 O(2) = prostaglandin H(2) + A + H(2)OBiophysicochemical properties : Kinetic parameters: KM=16.2 uM for arachidonate (in absence of sodium nitroprusside NOdonor); KM=17.0 uM for arachidonate (in presence of sodium nitroprusside NO donor); Vmax=81.3 nmol/min/mg enzyme (in absence of sodium nitroprusside NO donor); Vmax=132 nmol/min/mg enzyme (in absence of sodium nitroprusside NO donor); Induction : By cytokines and mitogens
Genatlas biochemistry entry for PTGS2 : prostaglandin G/H synthase 2,mitogen and cytokine inducible form (lipocalin family,Kernel group),monomer,potent mediator of inflammation,playing a minor role in colorectal carcinogenesis,overexpressed in squamous cell carcinoma of the head and neck,putatively involved in the tumor tissue response to necrosis Enzyme Numbers (IUBMB): EC 1.14.99.1 1 2 EC 1.14.99 2 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS2 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: PTGS2 (NM_000963 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PTGS2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PTGS2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTGS2
Gene Ontology (GO): 5/9 molecular function terms (GO ID links to tree view) (see all 9 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0004601 peroxidase activity
NAS 14511332 GO:0004666 prostaglandin-endoperoxide synthase activity
IDA 1380156 GO:0005515 protein binding
-- -- GO:0008289 lipid binding
IEA -- GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
IEA --
PTGS2 for ontologies About GeneDecksing Animal Models: Mouse knock-outs for PTGS2: Ptgs2 tm1Unc Ptgs2 tm2(Ptgs1)Fun Ptgs2 tm3Fun Ptgs2 tm1Jed 15/25 MGI mutant phenotypes (inferred from 13 alleles ) (MGI details for Ptgs2) (see all 25 ):
PTGS2 for phenotypes About GeneDecksing
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Pathways & Interactionsfor PTGS2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/39 super-pathways (see all 39 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Arachidonic acid metabolism 2 Synthesis of Prostaglandins (PG) and Thromboxanes (TX) 3 PEDF Induced Signaling 4 Metabolism 5 Immune response_IL-1 signaling pathway
Pathway sources See GeneCards unified pathways Show all pathways 5/9 EMD Millipore Pathways for PTGS2 (see all 9 )5/13 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PTGS2 (see all 13 )3
Cell Signaling Technology (CST) Pathways for PTGS2 5/10 GeneGo (Thomson Reuters) Pathways for PTGS2 (see all 10 )5/11 BioSystems Pathways for PTGS2 (see all 11 ) 5
Reactome Pathways for PTGS2 4 PharmGKB Pathways for PTGS2 5/6
Kegg Pathways (Kegg details for PTGS2) (see all 6 ):UniProtKB/Swiss-Prot: PGH2_HUMAN, P35354 Pathway : Lipid metabolism; prostaglandin biosynthesis
PTGS2 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PTGS2 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/79 Interacting proteins for PTGS2 (P35354 3 ENSP00000356438 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 79 )
About this table Gene Ontology (GO): 5/63 biological process terms (GO ID links to tree view) (see all 63 ): About this table
PTGS2 for ontologies About GeneDecksing
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Drugs & Compoundsfor PTGS2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
PTGS2 for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for PTGS2
Compounds for PTGS2 available from Tocris Bioscience About this table Compound Action
CAS
# DuP 697 Cyclooxygenase-2 (COX-2) inhibitor [88149-94-4] Nimesulide Cyclooxygenase-2 (COX-2) inhibitor [51803-78-2] Celecoxib Selective cyclooxygenase-2 (COX-2) inhibitor [169590-42-5] NS 398 Cyclooxygenase-2 (COX-2) inhibitor [123653-11-2] Valdecoxib Selective and potent COX-2 inhibitor [181695-72-7]
10/16 HMDB Compounds for PTGS2 (see all 16 ) About this table 67 DrugBank Compounds for PTGS2 (see first 10 ) About this table Compound Synonyms
CAS
# Type Actions PubMed Ids Rofecoxib MK 966 (see all 2 ) 162011-90-7 target inhibitor 10566562 20724158 10555907 10693877 11752352 18922570 20166930 11398914 10643177 10580458 Flurbiprofen FLP (see all 5 ) 5104-49-4 target inhibitor 19066416 17562170 10091674 10773011 10977131 11006278 11405284 Valdecoxib -- 181695-72-7 target inhibitor 11060833 12564662 12167567 10715145 11752352 12644588 15494548 Acetylsalicylic acid 2-Acetoxybenzenecarboxylic acid (see all 24 ) 50-78-2 target inhibitor 17033106 17301265 17258197 11752352 17037745 17181859 Antrafenine -- 55300-30-6 target inhibitor 17604186 17612049 17607546 11752352 17532719 17521299 Bismuth Subsalicylate Bismuth (see all 6 ) 14882-18-9 target inhibitor 5284360 15070163 15106733 15348270 15035793 15199473 Carprofen 2-(6-Chloro-9H-carbazol-2-yl)propanoic acid (see all 6 ) 53716-49-7 target inhibitor 15198222 11703020 10895904 17181139 15939622 11752352 Celecoxib -- 169590-42-5 target inhibitor 12055598 12093311 12104042 11752352 12086402 12086292 Diflunisal -- 22494-42-4 target inhibitor 8737748 11673972 10825891 11752352 11315375 12852483 Etodolac -- 41340-25-4 target inhibitor 15198222 11009046 11752352 12824918 10594327 11275997 Etoricoxib -- 202409-33-4 target inhibitor 17164136 17139284 17573128 11752352 17691997 17016423 Ibuprofen Ibuprophen (see all 3 ) 15687-27-1 target inhibitor 15494133 15556152 14510637 11752352 12852704 15481334 Icosapent Eicosapentaenoic acid (see all 4 ) 10417-94-4 target inhibitor 12562875 17459764 20463020 12573452 16141635 16190133 Ketoprofen -- 22071-15-4 target inhibitor 15198222 11729362 11814865 10895904 11752352 14513718 Lumiracoxib -- 220991-20-8 target inhibitor 15655513 15177307 14552704 11752352 14965322 15017615 Mefenamic acid Acide Mefenamique (see all 7 ) 61-68-7 target inhibitor 7832763 9626023 11752352 15792781 17150210 10393680 Meloxicam -- 71125-38-7 target inhibitor 10381057 11752352 10381787 10340919 10567199 10220944 Nabumetone Nabumetona (see all 2 ) 42924-53-8 target inhibitor 15456329 7615202 11304699 12047490 11752352 11153163 Naproxen -- 22204-53-1 target inhibitor 17604186 17612049 17607546 11752352 17532719 17521299 Oxaprozin Oxaprozina [INN-Spanish] (see all 3 ) 21256-18-8 target inhibitor 19952416 17024689 19338579 12065695 9831331 9650852 Piroxicam -- 36322-90-4 target inhibitor 10381057 11952155 11752352 11785774 11153163 15464832 Salicyclic acid 2-Carboxyphenol (see all 10 ) 69-72-7 target inhibitor 5284360 15070163 15106733 15348270 15035793 15199473 Tenoxicam -- 59804-37-4 target inhibitor 9152412 16245223 11563332 11752352 15756931 15943176 Thalidomide alpha-phthalimidoglutarimide (see all 5 ) 50-35-1 target antagonist 15892618 15446566 12710892 15598423 15982930 enzyme substrate 15892618 15446566 12710892 15598423 15982930 19515014 Tolmetin Tolmetin Sodium (see all 5 ) 26171-23-3 target inhibitor 14613550 17391279 9253954 10465690 11752352 15458776 Aminosalicylic Acid 4-aminosalicylic acid (see all 10 ) 65-49-6 target inhibitor 12463455 12208114 16855178 9256165 14742690 Antipyrine Acetasol (see all 14 ) 60-80-0 target inhibitor 17175104 11695253 17884974 17322116 11752352 Balsalazide Balsalazida [Spanish] (see all 4 ) 80573-04-2 target inhibitor 17139284 17016423 19743890 17981262 12950415 Diclofenac Diclofenac Acid (see all 4 ) 15307-86-5 target inhibitor 12705061 12534640 12925531 12852704 12588370 Indomethacin IMN (see all 9 ) 53-86-1 target inhibitor 15667901 15770365 15730717 15831440 15668944 Ketorolac Ketoralac (see all 4 ) 66635-83-4 target inhibitor 15102535 14568028 14568029 12446609 12110513 Magnesium salicylate -- -- target inhibitor 15070163 15106733 15348270 15035793 15199473 Meclofenamic acid Acide meclofenamique [INN-French] (see all 6 ) 644-62-2 target inhibitor 15198222 16290292 12409963 7825862 10639181 Mesalazine 5-aminosalicylate (see all 4 ) 89-57-6 target inhibitor 12463455 12208114 16855178 9256165 14742690 Salicylate-sodium -- -- target inhibitor 15070163 15106733 15035793 15199473 17259377 Sulfasalazine Sulfasalazin (see all 2 ) 599-79-1 target inhibitor 12463455 12208114 16855178 9256165 14742690 Sulindac -- 38194-50-2 target inhibitor 10485483 10657949 11078056 11118042 10372826 Trisalicylate-choline -- -- target inhibitor 17033106 14680616 17258197 17037745 17181859 Acetaminophen Acetaminofen (see all 5 ) 103-90-2 target inhibitor 17175104 17884974 17322116 11752352 Bromfenac -- 91714-94-2 target inhibitor 16982289 12016548 16846546 enzyme inhibitor 16982289 12016548 16846546 19668566 Lornoxicam Acabel (see all 12 ) 70374-39-9 target inhibitor 10450786 11846620 20399943 17516707 Phenylbutazone -- 50-33-9 target inhibitor 12213119 15939622 11752352 15489888 Salsalate salicylsalicylic acid (see all 3 ) 552-94-3 target inhibitor 10452868 9711054 16808554 12901032 Tiaprofenic acid 2-(5-Benzyl-2-thienyl)propionsaeure (see all 6 ) 33005-95-7 target inhibitor 17139284 2277128 11752352 17016423 gamma-Homolinolenic acid (8E,11E,14E)-8,11,14-Icosatrienoic acid (see all 7 ) 1783-84-2 target -- 15990700 11121413 11939906 16190133 Ginseng -- 50647-08-0 target inhibitor 15778128 15753395 17436372 Heme -- -- target -- 17139284 17016423 10592235 Niflumic Acid 2-(3-(Trifluoromethyl)-phenyl)aminonicotinic acid (see all 13 ) 4394-00-7 target inhibitor 17098211 17485303 16301791 Suprofen Suprofene [INN-French] (see all 2 ) 40828-46-4 target inhibitor 17139284 17016423 11885959 Lenalidomide CC-5013 (see all 3 ) 191732-72-6 target negative modulator 12720152 15598423 Nimesulide -- 51803-78-2 target inhibitor 11752352 16846549 1-Phenylsulfonamide-3-Trifluoromethyl-5-Parabromophenylpyrazole -- -- target -- 10592235 Bumetanide Bumetanida [INN-Spanish] (see all 2 ) 28395-03-1 enzyme inducer 10974021 Chlorphenesin alpha-Glyceryl ether (see all 7 ) 104-29-0 enzyme inhibitor 15242808 Cisplatin Cis-DDP (see all 4 ) 15663-27-1 enzyme inhibitor 21272267 Clodronate -- 10596-23-3 enzyme inhibitor 16861295 Dapsone Acedapsone (see all 29 ) 80-08-0 enzyme substrate 19515014 Desmopressin 1-Desamino-8-D-arginine vasopressin (see all 4 ) 16679-58-6 enzyme inducer 15644490 Drospirenone 6β,7β,15β,16β-dimethylene-3-oxo-17α-pregn-4-ene-21,17 carbolactone (see all 4 ) 67392-87-4 enzyme inhibitor 20063991 Fenoprofen Feneprofen calcium salt dihydrate (see all 3 ) 34597-40-5 target inhibitor 17050798 Flufenamic Acid -- 530-78-9 target -- 7864817 Nepafenac -- 78281-72-8 target inhibitor 10850857 Nonoxynol-9 -- 26571-11-9 enzyme inducer 21241401 Prostaglandin G2 -- -- target -- 10592235 Resveratrol (E)-5-(2-(4-hydroxyphenyl)ethenyl)-1,3-benzenediol (see all 9 ) 501-36-0 target inhibitor 11752352 Risedronate NE-58095 (see all 3 ) 105462-24-6 enzyme inducer 20738860 Tetrahydrobiopterin 5,6,7,8 Tetrahydrobiopterin (see all 3 ) 17528-72-2 enzyme inducer 17560944
10/117 Novoseek chemical compound relationships for PTGS2 gene (see all 117 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
celecoxib
97
1888
18230053 (7), 18766003 (7), 15014359 (6), 16230415 (6) (see all 99 )
rofecoxib
96
933
20110006 (10), 10411562 (6), 17620346 (5), 17636557 (4) (see all 99 )
pge2
94.8
3923
18727513 (9), 19452719 (9), 12493746 (8), 16585602 (7) (see all 99 )
prostaglandin
92.7
1317
10735591 (5), 10692251 (4), 9016346 (4), 8063757 (3) (see all 99 )
ns 398
92.2
312
14630280 (5), 15703831 (4), 15382039 (4), 19956533 (4) (see all 99 )
valdecoxib
91.6
196
15494548 (6), 17605893 (3), 18171312 (3), 17429597 (3) (see all 99 )
etoricoxib
89.3
163
11160644 (5), 12817520 (4), 15827069 (3), 19392653 (3) (see all 99 )
arachidonic acid
88.4
747
9373167 (6), 9461572 (5), 9973312 (4), 9031736 (4) (see all 99 )
nimesulide
88.3
372
18333314 (5), 18288985 (5), 19152549 (4), 14977856 (4) (see all 99 )
meloxicam
87.8
275
16245223 (4), 12911075 (3), 19078323 (3), 10812057 (3) (see all 99 )
3 PharmGKB related drug/compound annotations for PTGS2 gene About this table Search CenterWatch for drugs/clinical trials and news about PTGS2 / PGH2
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Transcriptsfor PTGS2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
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)About This Section REFSEQ mRNAs for PTGS2 gene: NM_000963.2 Unigene Cluster for PTGS2:
Prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) Hs.196384 [show with all ESTs ] Unigene Representative Sequence: NM_000963 5 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000367468 (uc001gsb.3 uc009wyo.3 ) ENST00000490885 ENST00000559627 ENST00000466691 ENST00000559800 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS2 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: PTGS2 (NM_000963 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PTGS2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PTGS2
Additional cDNA sequence: AJ634912.1 AK292167.1 AY151286.1 AY462100.1 BC013734.1 HM473188.1 L15326.1 M90100.1
3 DOTS entries : DT.413375 DT.91935010
DT.121406567 24/101 AceView cDNA sequences (see all 101 ):
AL710813 AJ634912 CK823042 BP335244 BG152882 BQ722004 AY462100 BM978796 CB143773 CK823043 D58162 BG236304 BQ100700 AA296431 BC013734 CB960307 BQ100978 CD365731 AA644211 BP337788 BX363285 BI335813 CA436148 CA445948 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for PTGS2 About this scheme ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b SP1 :                           -         SP2 :                 -           -         SP3 :                           -         SP4 :                                   SP5 :                                  
ECgene alternative splicing isoforms for PTGS2
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Expression for PTGS2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section PTGS2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CTGTTCCTTT
About this image PTGS2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See PTGS2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PTGS2 SOURCE GeneReport for Unigene cluster: Hs.196384 SABiosciences Expression via Pathway-Focused PCR Arrays including PTGS2 (see all 25 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PTGS2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat PTGS2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PTGS2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PTGS2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTGS2
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Orthologsfor PTGS2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for PTGS2 gene from 4/16 species (see all 16 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
PTGS21
prostaglandin-endoperoxide synthase 2 (prostaglandin more
77.61(n) 81.76(a)
 
396451 NM_001167719.1 NP_001161191.1
lizard (Anolis carolinensis)
Reptilia
PTGS26
--
78(a)
1 ↔ 1
GL343203.1(2256804-2267500)
African clawed frog (Xenopus laevis)
Amphibia
Xl.333292
Xenopus laevis transcribed sequence with moderate similarity more
75.65(n)
 
CA988090.1
zebrafish (Danio rerio)
Actinopterygii
ptgs22
prostaglandin-endoperoxide synthase 2
75.55(n)
 
246227 AY028585.1
ENSEMBL Gene Tree for PTGS2 (if available)TreeFam Gene Tree for PTGS2 (if available)
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Paralogsfor PTGS2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for PTGS2 gene PTGS1 2 2 SIMAP similar genes for PTGS2 using alignment to 3 protein entries: PGH2_HUMAN (see all proteins ):COX-2 PTGS1
PTGS2 for paralogs About GeneDecksing
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Genomic Variantsfor PTGS2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 1 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for PTGS2 (186640923 - 186649559 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for PTGS2: -- Human Gene Mutation Database (HGMD) : PTGS2 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PTGS2
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Disorders
/ Diseasesfor PTGS2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
PTGS2 for disorders About GeneDecksing
OMIM gene information: 600262
OMIM disorders : --20/359 diseases for PTGS2 (see all 359 ): About MalaCards estrogen-receptor negative breast cancer familial adenomatous polyposis attenuated familial adenomatous polyposis b-cell non-hodgkin lymphoma toxic epidermal necrolysis stevens-johnson syndrome peutz-jeghers syndrome bowenoid papulosis end stage renal failure uterine carcinosarcoma non-hodgkin lymphoma cystoid macular edema squamous cell carcinoma bile duct cysts recurrent respiratory papillomatosis hemophilic arthropathy dna topoisomerase ii patent ductus arteriosus central nervous system lymphoma fibrous histiocytoma 20/22 diseases from the University of Copenhagen DISEASES database for PTGS2 (see all 22 ):Colorectal cancer Arthritis Carcinoma Vascular disease Familial adenomatous polyposis Gastrointestinal system disease Adenoma Lung cancer Pain agnosia Breast cancer Brain disease Esophageal cancer Myocardial infarction Prostate cancer Skin cancer Alzheimer's disease Urinary bladder cancer Endometriosis Kidney disease Pancreatic cancer 10/98 Novoseek disease relationships for PTGS2 gene (see all 98 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
inflammation
82.3
1159
16580899 (5), 11437671 (4), 10414396 (4), 12669881 (4) (see all 99 )
colon cancer
78.8
585
19437564 (7), 12432918 (6), 20046424 (5), 18320325 (5) (see all 99 )
osteoarthritis
78.6
261
15974939 (4), 10560596 (3), 19602530 (3), 19807303 (3) (see all 99 )
tumors
76.5
3567
15200266 (8), 20192574 (8), 19329856 (7), 16139560 (7) (see all 99 )
colorectal cancer
76.2
748
19671325 (9), 16324362 (7), 16551850 (7), 19132985 (6) (see all 99 )
gastrointestinal complications
75.5
50
15475342 (3), 19947799 (2), 15190384 (2), 17552414 (2) (see all 33 )
cancer
75
1766
16124396 (6), 12692419 (6), 17428102 (5), 16007171 (5) (see all 99 )
familial adenomatous polyposis
72.3
128
14581346 (3), 10874062 (3), 16622748 (2), 11495083 (2) (see all 86 )
gastrointestinal ulcers
71.7
19
17611980 (1), 12208114 (1), 18356636 (1), 11961974 (1) (see all 14 )
rheumatoid arthritis
69.3
196
15974939 (3), 18261308 (3), 11087881 (2), 15775145 (2) (see all 99 )
Genetic Association Database (GAD): PTGS2 Human Genome Epidemiology (HuGE) Navigator: PTGS2 (284 documents) Export disorders for PTGS2 gene to outside databases
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Publicationsfor PTGS2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for PTGS2 gene, integrated from 9 sources (see all 6603 ): (articles sorted by number of sources associating them with PTGS2) Utopia : connect your pdf to the dynamic world of online information
Human cyclooxygenase-2 cDNA. (PubMed id 1380156) 1 , 2 , 3 Hla T. and Neilson K. (1992) Characterization of the human gene (PTGS2) encoding prostaglandin- endoperoxide synthase 2. (PubMed id 8181472) 1 , 2 , 9 Kosaka T.... Tanabe T. (1994) Polymorphisms in prostaglandin synthase 2/cyclooxygenase 2 (PTGS2/COX2) and risk of colorectal cancer. (PubMed id 15173859) 1 , 4, 9 Cox D.G....Moreno V. (2004) A common polymorphism in the 3'UTR of cyclooxygenase 2/prostaglandin synthase 2 gene and risk of lung cancer in a Chinese population. (PubMed id 15777967) 1 , 4, 9 Hu Z....Shen H. (2005) COX-2 gene promoter haplotypes and prostate cancer risk. (PubMed id 14754878) 1 , 4, 9 Panguluri R.C....Kittles R.A. (2004) Resistance exercise and cyclooxygenase (COX) expression in human skeletal muscle: implications for COX-inhibiting drugs and protein synthesis. (PubMed id 17322116) 1 , 7, 9 Weinheimer E.M....Trappe T.A. (2007) The cyclooxygenase 2 -765 C promoter allele is a protective factor for Alzheimer's disease. (PubMed id 16309832) 1 , 4, 9 Abdullah L....Mullan M. (2006) Genetic polymorphisms in the cyclooxygenase-2 gene, use of nonsteroidal anti-inflammatory drugs, and breast cancer risk. (PubMed id 17181859) 1 , 7, 9 Shen J....Santella R.M. (2006) Polymorphism in the nuclear factor kappa-B binding promoter region of cyclooxygenase-2 is associated with an increased risk of bladder cancer. (PubMed id 15596291) 1 , 4, 9 Kang S....Lee H.P. (2005) Colorectal adenoma risk is modified by the interplay between polymorphisms in arachidonic acid pathway genes and fish consumption. (PubMed id 15550453) 1 , 4, 9 Siezen C.L....Kampman E. (2005)
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External Searches for PTGS2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing PTGS2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing PTGS2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing PTGS2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for PTGS2 Pharmacogenomics, SNPs, Pathways ATLAS Chromosomes in Cancer entry for PTGS2 Genetics and Cytogenetics in Oncology and Haematology NIEHS-SNPs http://egp.gs.washington.edu/data/ptgs2/ SeattleSNPs http://pga.gs.washington.edu/data/ptgs2/
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About This Section Patent Information for PTGS2 gene: Search GeneIP for patents involving PTGS2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PTGS2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for PTGS2 OriGene shRNA RFP for PTGS2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for PTGS2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PTGS2 OriGene Protein Over-expression Lysate for PTGS2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for PTGS2 OriGene 3'-UTR Clone for PTGS2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for PTGS2 OriGene Custom Protein Services for PTGS2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PTGS2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PTGS2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PTGS2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat PTGS2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PTGS2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PTGS2
Antibodies & Assays for PTGS2   (COX-2)
Tocris compounds for PTGS2
PTGS2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTGS2
ThermoFisher Antibodies for PTGS2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PTGS2
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