PTGS1 Gene
protein-coding GIFtS : 72
GCID: GC09 P125133
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H...
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Aliasesfor PTGS1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Prostaglandin-Endoperoxide Synthase 1 (Prostaglandin G/H Synthase AndCyclooxygenase) 1 2 PES-12 COX11 2 3 5 PGG/HS2 PGHS-11 2 3 PHS12 PTGHS1 2 Cyclooxygenase-13 Prostaglandin H2 Synthase 12 3 Prostaglandin G/H Synthase 12 PGH Synthase 12 3 COX-13 EC 1.14.99.13 8 Cyclooxygenase-13 COX32 5 PHS 13 PCOX12 5 Prostaglandin-Endoperoxide Synthase 13 PGHS12 5 EC 1.14.998
Export aliases for PTGS1 gene to outside databases Previous GC identifers: GC09P116237 GC09P116779 GC09P118586 GC09P120509 GC09P122212 GC09P124173 GC09P094748
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Summariesfor PTGS1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for PTGS1 : This is one of two genes encoding similar enzymes that catalyze the conversion of arachinodate to prostaglandin. The encoded protein regulates angiogenesis in endothelial cells, and is inhibited by nonsteroidal anti-inflammatory drugs such as aspirin. The protein may promote cell proliferation during tumor progression. Alternative splicing results in multiple transcript variants. (provided by RefSeq, Sep 2012) UniProtKB/Swiss-Prot: PGH1_HUMAN, P23219 Function : May play an important role in regulating or promoting cell proliferation in some normal and neoplasticallytransformed cells summary
for PTGS1 : Cyclooxygenase (also known as COX, Prostaglandin-endoperoxide synthase, Prostaglandin G/H synthase) isexpressed in cells in three isoforms: COX-1, COX-2 and COX-3. COX-1 (constitutive) and COX-2 (inducible)isoforms catalyze the rate-limiting step of prostaglandin production and are the targets of non-steroidalanti-inflammatory drugs. COX-3 does not appear to be involved in inflammatory processes, but seems to beinvolved in pain and fever. COX-3 is thought to be derived through the retention of the highly structured G+ C-rich intron 1 of the COX-1 gene. Gene Wiki entry for PTGS1
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Genomic Viewsfor PTGS1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000009.11 NC_018920.1 NT_008470.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PTGS1 gene promoter: Sp1 AP-1 ATF-2 c-Jun Other transcription factors Search SABiosciences Chromatin IP Primers for PTGS1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PTGS1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 9q32-q33.3 Ensembl cytogenetic band: 9q33.2 HGNC cytogenetic band: 9q32-q33.3 PTGS1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 9 GeneLoc Exon Structure
GeneLoc location for GC09P125133: view genomic region
(about GC identifiers )
Start:
125,132,824 bp from pter
End:
125,157,982 bp from pter
Size:
25,159 bases
Orientation:
plus strand
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Proteinsfor PTGS1 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: PGH1_HUMAN, P23219 (See
protein sequence )Recommended Name: Prostaglandin G/H synthase 1 precursor Size : 599 amino acids; 68686 Da
Cofactor : Binds 1 heme B (iron-protoporphyrin IX) group per subunit (By similarity)
Subunit : Homodimer
Subcellular location : Microsome membrane; Peripheral membrane protein. Endoplasmic reticulum membrane; Peripheralmembrane protein
Miscellaneous : This enzyme acts both as a dioxygenase and as a peroxidase
Miscellaneous : This enzyme is the target of nonsteroidal anti-inflammatory drugs such as aspirin
Sequence caution : Sequence=CAI14716.1; Type=Erroneous gene model prediction;
Secondary accessions : A8K1V7 Q15122 Q5T7T6 Q5T7T7 Q5T7T8Alternative splicing : 2 isoforms : P23219-1 P23219-2 Explore the universe of human proteins at neXtProt for PTGS1: NX_P23219 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P23219 4/24 DME Specific Peptides for PTGS1 (P23219 ) (see all 24 )PTGS1 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (7 alternative transcripts):
NP_000953.2 NP_001258093.1 NP_001258094.1 NP_001258095.1 NP_001258296.1 NP_001258297.1 NP_542158.1 ENSEMBL proteins: ENSP00000223423 ENSP00000354612 ENSP00000411606 ENSP00000437709 ENSP00000362802 Reactome Protein details: P23219 Human Recombinant Protein Products: Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10 ): About this table
PTGS1 for ontologies About GeneDecksing PTGS1 Antibody Products: Assay Products for PTGS1:
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Protein
Domains / Familiesfor PTGS1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PTGS1 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P23219 ProtoNet protein and cluster: P23219
3 Blocks protein families : IPB002007 Animal haem peroxidase signature IPB006210 Type I EGF IPB010255 Haem peroxidase UniProtKB/Swiss-Prot: PGH1_HUMAN, P23219 Similarity : Belongs to the prostaglandin G/H synthase familySimilarity : Contains 1 EGF-like domain
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Functionfor PTGS1 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: PGH1_HUMAN, P23219 Function : May play an important role in regulating or promoting cell proliferation in some normal and neoplasticallytransformed cells Catalytic activity : Arachidonate + AH(2) + 2 O(2) = prostaglandin H(2) + A + H(2)O
Genatlas biochemistry entry for PTGS1 : prostaglandin G/H synthase 1,constitutively expressed in a wide range of tissues,acting first as a dioxygenase,then as a peroxidase (lipocalin family,Kernel group),monomer,potent mediator of inflammation Enzyme Numbers (IUBMB): EC 1.14.99.1 1 2 EC 1.14.99 2 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS1 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS1 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): PTGS1 (NM_080591 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PTGS1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PTGS1
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTGS1
Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0004601 peroxidase activity
IEA -- GO:0004666 prostaglandin-endoperoxide synthase activity
IDA 1380156 GO:0008289 lipid binding
-- -- GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
IEA -- GO:0020037 heme binding
IEA --
PTGS1 for ontologies About GeneDecksing Animal Models: Mouse knock-outs for PTGS1: Ptgs1 tm1Unc Ptgs1 tm1Fun 15/19 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Ptgs1) (see all 19 ):
PTGS1 for phenotypes About GeneDecksing
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Pathways & Interactionsfor PTGS1 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/17 super-pathways (see all 17 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Arachidonic acid metabolism 2 Synthesis of Prostaglandins (PG) and Thromboxanes (TX) 3 Metabolism 4 Acetaminophen Pathway, Pharmacokinetics 5 PKA activation in glucagon signalling
Pathway sources See GeneCards unified pathways Show all pathways 3 EMD Millipore Pathways for PTGS1 1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for PTGS1 2
Cell Signaling Technology (CST) Pathways for PTGS1 4 GeneGo (Thomson Reuters) Pathways for PTGS1 4 BioSystems Pathways for PTGS1 5/7
Reactome Pathways for PTGS1 (see all 7 )5 PharmGKB Pathways for PTGS1 2
Kegg Pathways (Kegg details for PTGS1) :UniProtKB/Swiss-Prot: PGH1_HUMAN, P23219 Pathway : Lipid metabolism; prostaglandin biosynthesis
PTGS1 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PTGS1 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/46 Interacting proteins for PTGS1 (P23219 2 , 3 ENSP00000354612 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 46 )
About this table Gene Ontology (GO): 5/17 biological process terms (GO ID links to tree view) (see all 17 ): About this table
PTGS1 for ontologies About GeneDecksing
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Drugs & Compoundsfor PTGS1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
PTGS1 for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for PTGS1
Compounds for PTGS1 available from Tocris Bioscience About this table Compound Action
CAS
# Tenidap NSAID, cyclooxygenase (COX-1) inhibitor. Also opener of KIR2.3 [120210-48-2] FR 122047 hydrochloride Cyclooxygenase (COX-1) inhibitor [130717-51-0] Piroxicam Cyclooxygenase-1 (COX-1) inhibitor [36322-90-4] (S)-(+)-Ibuprofen Cyclooxygenase inhibitor (COX-1 > COX-2) [51146-56-6] SC 560 Cyclooxygenase (COX-1) inhibitor [188817-13-2]
10/13 HMDB Compounds for PTGS1 (see all 13 ) About this table 10/102 DrugBank Compounds for PTGS1 (see all 102 ) About this table 10/125 Novoseek chemical compound relationships for PTGS1 gene (see all 125 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
prostaglandin
91
300
9461646 (4), 15035793 (3), 10609518 (2), 7947975 (2) (see all 99 )
pge2
90.6
411
11809691 (4), 8872612 (3), 15963707 (3), 9779823 (3) (see all 99 )
celecoxib
89.5
89
12152003 (2), 16952493 (2), 10664917 (2), 15498669 (2) (see all 62 )
arachidonic acid
89.5
273
10358065 (5), 7737984 (4), 10551587 (3), 10206978 (3) (see all 99 )
rofecoxib
89.5
72
10096266 (3), 11028250 (3), 11136272 (2), 10411562 (2) (see all 48 )
aspirin
84.6
396
11717412 (5), 18753249 (5), 15041270 (4), 19152549 (4) (see all 99 )
meloxicam
83.5
52
10381787 (3), 10812057 (3), 11874389 (3), 10340919 (2) (see all 32 )
ns 398
82.8
16
10217458 (2), 9875720 (1), 11563332 (1), 16964399 (1) (see all 15 )
prostaglandin-h2
82.3
34
17878511 (2), 8652509 (1), 10734173 (1), 11081405 (1) (see all 20 )
valdecoxib
81.9
6
12644588 (1), 15494548 (1), 16519515 (1), 12466002 (1) (see all 5 )
Search CenterWatch for drugs/clinical trials and news about PTGS1 / PGH1
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Transcriptsfor PTGS1 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for PTGS1 gene (7 alternative transcripts): NM_000962.3 NM_001271164.1 NM_001271165.1 NM_001271166.1 NM_001271367.1 NM_001271368.1 NM_080591.2 Unigene Cluster for PTGS1:
Prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) Hs.201978 [show with all ESTs ] Unigene Representative Sequence: NM_001271368 5 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000223423 ENST00000362012 (uc011lys.1 uc010mwb.1 uc004bmg.1 uc004bmf.1 uc004bmh.1 uc011lyt.1 )ENST00000426608 ENST00000540753 ENST00000373698 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS1 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS1 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): PTGS1 (NM_080591 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PTGS1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PTGS1
Additional cDNA sequence: AF086438.1 AF129755.1 AJ420464.1 AK290022.1 AK295221.1 AK304403.1 AK308222.1 BC029840.1 DQ180740.1 DQ180741.1 DQ180742.1 M59979.1 S36219.1 S36271.1 S78220.1 U63846.1
12 DOTS entries : DT.446317 DT.100767562
DT.121193472 DT.101957346 DT.100767557 DT.101982936 DT.121193484 DT.75197219 DT.100767561 DT.100767556 DT.97797260 DT.91965381 24/156 AceView cDNA sequences (see all 156 ):
AA630760 CD014048 CA444725 AI076274 AL709654 BF064148 S36219 AL556508 BM728404 BF477437 AI885487 AI567867 BM679302 AA707736 BM990424 BQ014239 AI863410 AA345128 BC029840 AI202433 AI569876 NM_080591 CB216527 N54739 GeneLoc Exon Structure 5/8 Alternative Splicing Database (ASD) splice patterns (SP) for PTGS1 (see all 8 ) About this scheme ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12a · 12b ^ 13 ^ 14a · 14b · 14c · 14d SP1 :                                             SP2 :           -   -                                 SP3 :           -   -   -                   -             SP4 :           -   -         -                         SP5 :           -   -                                
ECgene alternative splicing isoforms for PTGS1
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Expression for PTGS1 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section PTGS1 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: AAGCTAATAA
About this image PTGS1 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See PTGS1 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PTGS1 SOURCE GeneReport for Unigene cluster: Hs.201978 SABiosciences Expression via Pathway-Focused PCR Arrays including PTGS1 (see all 6 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PTGS1Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat PTGS1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PTGS1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PTGS1 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTGS1
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Orthologsfor PTGS1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for PTGS1 gene from 5/15 species (see all 15 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
mouse (Mus musculus)
Mammalia
Ptgs11 , 5
prostaglandin-endoperoxide synthase 11, 5
85.59(n) 1 89.78(a) 1
 
2 (24.19 cM) 5 19224 1 NM_008969.3 1 NP_032995.1 1 36230426 5
chicken (Gallus gallus)
Aves
PTGS11
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) less
76.17(n) 78.52(a)
 
427752 XM_425326.3 XP_425326.3
lizard (Anolis carolinensis)
Reptilia
PTGS16
--
71(a)
1 ↔ 1
GL344642.1(5678-11206)
African clawed frog (Xenopus laevis)
Amphibia
Xl.61162
Xenopus laevis transcribed sequence with moderate similarity to protein spP23219 (H.sapiens) PGH1_HUMAN Prostaglandin G/H synthase 1 precursor (Cyclooxygenase -1) (COX-1) (Prostaglandin-endoperoxide synthase 1) (Prostaglandin H2 synthase 1) (PGH synthase less
72.97(n)
 
48053286
zebrafish (Danio rerio)
Actinopterygii
ptgs12
prostaglandin-endoperoxide synthase 1
76.12(n)
 
246226 AY028584.1
ENSEMBL Gene Tree for PTGS1 (if available)TreeFam Gene Tree for PTGS1 (if available)
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Paralogsfor PTGS1 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for PTGS1 gene PTGS2 2 1 SIMAP similar gene for PTGS1 using alignment to 2 protein entries: PGH1_HUMAN (see all proteins ):PTGS2
PTGS1 for paralogs About GeneDecksing
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Genomic Variantsfor PTGS1 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
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Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 9 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for PTGS1 (125132824 - 125157982 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for PTGS1 1 Indel : 47643 Human Gene Mutation Database (HGMD) : PTGS1 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PTGS1
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Disorders
/ Diseasesfor PTGS1 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
PTGS1 for disorders About GeneDecksing
OMIM gene information: 176805
OMIM disorders : --20/167 diseases for PTGS1 (see all 167 ): About MalaCards spinal cord injury gastroesophageal reflux disease familial adenomatous polyposis deep vein thrombosis patent ductus arteriosus adenomatous polyposis coli ureteral obstruction barrett's esophagus urticaria abdominal aortic aneurysm peptic ulcer placental abruption morphine dependence aortic aneurysm inflammatory bowel disease bladder transitional cell carcinoma chronic cystitis asthma and nasal polyps polycythemia vera transitional cell carcinoma 2 diseases from the University of Copenhagen DISEASES database for PTGS1 :Vascular disease Arthritis 10/93 Novoseek disease relationships for PTGS1 gene (see all 93 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
inflammation
71.7
163
16982919 (3), 10628589 (2), 12733982 (2), 17270500 (2) (see all 99 )
osteoarthritis
61.6
22
15337183 (2), 11041909 (2), 10719816 (1), 14752171 (1) (see all 16 )
gastrointestinal complications
58.1
3
10377455 (1), 14602052 (1)
colon cancer
57
18
19258012 (4), 16091009 (2), 7780968 (2), 16984374 (2) (see all 12 )
intestinal polyps
53.6
5
12941808 (3), 16984374 (1)
ulcer
53.2
28
16247187 (3), 11519793 (2), 17926541 (2), 11136275 (2) (see all 15 )
nasal polyps
52.1
29
16517580 (4), 15921208 (4), 15480320 (2), 19132974 (2) (see all 11 )
rheumatoid arthritis
51.8
11
10719816 (2), 15167967 (1), 10390126 (1), 10812057 (1) (see all 9 )
polyps
50
31
12941808 (4), 11584208 (2), 11495083 (2), 19251796 (1) (see all 11 )
arthritis
50
13
11550975 (2), 10193996 (1), 9714356 (1), 10225538 (1) (see all 10 )
Genetic Association Database (GAD): PTGS1 Human Genome Epidemiology (HuGE) Navigator: PTGS1 (70 documents) Export disorders for PTGS1 gene to outside databases
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Publicationsfor PTGS1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for PTGS1 gene, integrated from 9 sources (see all 1599 ): (articles sorted by number of sources associating them with PTGS1) Utopia : connect your pdf to the dynamic world of online information
Human platelet/erythroleukemia cell prostaglandin G/H synthase: cDNA cloning, expression, and gene chromosomal assignment. (PubMed id 1907252) 1 , 2 , 3 Funk C.D.... Fitzgerald G.A. (1991) Cloning of human gene encoding prostaglandin endoperoxide synthase and primary structure of the enzyme. (PubMed id 2512924) 1 , 2 , 3 Yokoyama C. and Tanabe T. (1989) Mutations within the cyclooxygenase-1 gene in aspirin non-responders with recurrence of stroke. (PubMed id 15041270) 1 , 4, 9 Hillarp A....Mattiasson I. (2003) Characterization of the human prostaglandin H synthase 1 gene (PTGS1): exclusion by genetic linkage analysis as a second modifier gene in familial thrombosis. (PubMed id 12192304) 1 , 2 , 9 Scott B.T....Long G.L. (2002) Cyclooxygenase-1 gene polymorphisms in patients with different asthma phenotypes and atopy. (PubMed id 16055872) 1 , 4, 9 Shi J....Kedda M.A. (2005) Resistance exercise and cyclooxygenase (COX) expression in human skeletal muscle: implications for COX-inhibiting drugs and protein synthesis. (PubMed id 17322116) 1 , 7, 9 Weinheimer E.M....Trappe T.A. (2007) Mutational and X-ray crystallographic analysis of the interaction of dihomo-gamma -linolenic acid with prostaglandin endoperoxide H synthases. (PubMed id 11121413) 1 , 7, 9 Thuresson E.D....Smith W.L. (2001) A study of the combined effect of the CLDN5 locus and the genes for the phospholipid metabolism pathway in schizophrenia. (PubMed id 16181776) 1 , 4 Wei J. and Hemmings G.P. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Polymorphisms in PTGS1 (=COX-1) and risk of colorectal polyps. (PubMed id 15159324) 1 , 4 Ulrich C.M....Potter J.D. (2004)
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External Searches for PTGS1 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing PTGS1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing PTGS1 gene
(According to HUGE )
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Specialized Databases showing PTGS1 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for PTGS1 gene: Search GeneIP for patents involving PTGS1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PTGS1 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for PTGS1 OriGene shRNA RFP for PTGS1 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for PTGS1 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PTGS1 OriGene Protein Over-expression Lysate for PTGS1 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for PTGS1 OriGene 3'-UTR Clone for PTGS1 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS1 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PTGS1 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for PTGS1 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for PTGS1 OriGene Custom Protein Services for PTGS1 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PTGS1 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PTGS1 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PTGS1 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat PTGS1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PTGS1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PTGS1
Antibodies & Assays for PTGS1   (COX-1)
Tocris compounds for PTGS1
PTGS1 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTGS1
ThermoFisher Antibodies for PTGS1
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PTGS1
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