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PTGS1 Gene(Protein Coding)

Prostaglandin-Endoperoxide Synthase 1

GCID:
GC09P122370
GIFtS:
68
Genes Participants
UDN Logo

Aliases for PTGS1 Gene

Aliases for PTGS1 Gene

  • Prostaglandin-Endoperoxide Synthase 1 2 3 4 5
  • Prostaglandin-Endoperoxide Synthase 1 (Prostaglandin G/H Synthase And Cyclooxygenase) 2 3
  • Prostaglandin H2 Synthase 1 3 4
  • Cyclooxygenase-1 3 4
  • PGH Synthase 1 3 4
  • EC 1.14.99.1 4 61
  • PGHS-1 3 4
  • COX1 3 4
  • Prostaglandin G/H Synthase 1 3
  • EC 1.14.99 61
  • PGG/HS 3
  • PCOX1 3
  • PES-1 3
  • PGHS1 3
  • PTGHS 3
  • COX-1 4
  • PHS 1 4
  • COX3 3
  • PHS1 3

External Ids for PTGS1 Gene

Previous GeneCards Identifiers for PTGS1 Gene

  • GC09P116237
  • GC09P116779
  • GC09P118586
  • GC09P120509
  • GC09P122212
  • GC09P124173
  • GC09P125133
  • GC09P094748

Summaries for PTGS1 Gene

Entrez Gene Summary for PTGS1 Gene

  • This is one of two genes encoding similar enzymes that catalyze the conversion of arachinodate to prostaglandin. The encoded protein regulates angiogenesis in endothelial cells, and is inhibited by nonsteroidal anti-inflammatory drugs such as aspirin. Based on its ability to function as both a cyclooxygenase and as a peroxidase, the encoded protein has been identified as a moonlighting protein. The protein may promote cell proliferation during tumor progression. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014]

GeneCards Summary for PTGS1 Gene

PTGS1 (Prostaglandin-Endoperoxide Synthase 1) is a Protein Coding gene. Diseases associated with PTGS1 include Chronic Cystitis and Urticaria. Among its related pathways are Development VEGF signaling via VEGFR2 - generic cascades and Serotonergic synapse. GO annotations related to this gene include heme binding and dioxygenase activity. An important paralog of this gene is PTGS2.

UniProtKB/Swiss-Prot for PTGS1 Gene

  • Converts arachidonate to prostaglandin H2 (PGH2), a committed step in prostanoid synthesis. Involved in the constitutive production of prostanoids in particular in the stomach and platelets. In gastric epithelial cells, it is a key step in the generation of prostaglandins, such as prostaglandin E2 (PGE2), which plays an important role in cytoprotection. In platelets, it is involved in the generation of thromboxane A2 (TXA2), which promotes platelet activation and aggregation, vasoconstriction and proliferation of vascular smooth muscle cells.

Tocris Summary for PTGS1 Gene

  • Cyclooxygenase (also known as COX, Prostaglandin-endoperoxide synthase, Prostaglandin G/H synthase) is expressed in cells in three isoforms. COX-1 (constitutive) and COX-2 (inducible) isoforms catalyze the rate-limiting step of prostaglandin production.

Gene Wiki entry for PTGS1 Gene

No data available for CIViC summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PTGS1 Gene

Genomics for PTGS1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for PTGS1 Gene

Enhancers for PTGS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G122346 1.4 FANTOM5 Ensembl ENCODE 12 -23.3 -23316 1.7 PTBP1 ZFP64 ARID4B DMAP1 ZNF48 ZBTB40 ZSCAN9 THAP11 HMG20B MXD4 PTGS1 TTLL11 RBM18 MRRF ENSG00000233616 ENSG00000229245 GC09P122331
GH09G122463 1.2 Ensembl ENCODE 10.2 +94.3 94277 1.9 PKNOX1 ARID4B BRCA1 ZNF2 ZNF143 DEK JUNB REST MIER2 TBX21 OR1Q1 OR1K1 OR1N1 OR1J4 PTGS1 OR5C1 RBM18 MRRF TTLL11 ENSG00000231465
GH09G122125 1.2 Ensembl ENCODE 10.1 -244.1 -244066 2.8 ELF3 HDGF ATF1 PKNOX1 RB1 ARID4B SIN3A DNMT3B ZNF2 RAD21 TTLL11 MRRF RBM18 PTGS1 OR1K1 MIR4478 NDUFA8
GH09G122443 1 ENCODE 11.3 +74.9 74854 4.5 PKNOX1 ATF1 CREB3L1 ARNT E2F7 TCF12 ZNF766 ELK1 GATA2 FOS PTGS1 OR1K1 ENSG00000231465 OR5C1 TTLL11 OR1J2 ENSG00000229245
GH09G122453 1 Ensembl ENCODE 10.6 +82.8 82796 0.3 GTF2F1 CTCF SIN3A MAX CEBPG RAD21 RFX5 ZNF143 SMC3 DEK PTGS1 OR1K1 TTLL11 OR5C1 OR1J2 ENSG00000231465
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PTGS1 on UCSC Golden Path with GeneCards custom track

Promoters for PTGS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000241048 570 601 BCOR HDAC1 CBX3 SUZ12 ZMYM3 RBBP5 EGR1 POLR2A TRIM24 PHF8

Transcription factor binding sites by QIAGEN in the PTGS1 gene promoter:

Genomic Location for PTGS1 Gene

Chromosome:
9
Start:
122,370,530 bp from pter
End:
122,395,705 bp from pter
Size:
25,176 bases
Orientation:
Plus strand

Genomic View for PTGS1 Gene

Genes around PTGS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PTGS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PTGS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for PTGS1 Gene

Proteins for PTGS1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for PTGS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P23219-PGH1_HUMAN
    Recommended name:
    Prostaglandin G/H synthase 1
    Protein Accession:
    P23219
    Secondary Accessions:
    • A8K1V7
    • B4DHQ2
    • B4E2S5
    • Q15122
    • Q3HY28
    • Q3HY29
    • Q5T7T6
    • Q5T7T7
    • Q5T7T8

    Protein attributes for PTGS1 Gene

    Size:
    599 amino acids
    Molecular mass:
    68686 Da
    Cofactor:
    Name=heme b; Xref=ChEBI:CHEBI:60344;
    Quaternary structure:
    • Homodimer.
    Miscellaneous:
    • Conversion of arachidonate to prostaglandin H2 is mediated by 2 different isozymes: the constitutive PTGS1 and the inducible PTGS2. PGHS1 is expressed constitutively and generally produces prostanoids acutely in response to hormonal stimuli to fine-tune physiological processes requiring instantaneous, continuous regulation (e.g. hemostasis). PGHS2 is inducible and typically produces prostanoids that mediate responses to physiological stresses such as infection and inflammation.
    • PTGS1 and PTGS2 are the targets of nonsteroidal anti-inflammatory drugs (NSAIDs) including aspirin and ibuprofen. Aspirin is able to produce an irreversible inactivation of the enzyme through a serine acetylation. Inhibition of the PGHSs with NSAIDs acutely reduces inflammation, pain, and fever, and long-term use of these drugs reduces fatal thrombotic events, as well as the development of colon cancer and Alzheimers disease. PTGS2 is the principal isozyme responsible for production of inflammatory prostaglandins. New generation PTGSs inhibitors strive to be selective for PTGS2, to avoid side effects such as gastrointestinal complications and ulceration.
    • The conversion of arachidonate to prostaglandin H2 is a 2 step reaction: a cyclooxygenase (COX) reaction which converts arachidonate to prostaglandin G2 (PGG2) and a peroxidase reaction in which PGG2 is reduced to prostaglandin H2 (PGH2). The cyclooxygenase reaction occurs in a hydrophobic channel in the core of the enzyme. The peroxidase reaction occurs at a heme-containing active site located near the protein surface. The nonsteroidal anti-inflammatory drugs (NSAIDs) binding site corresponds to the cyclooxygenase active site.
    SequenceCaution:
    • Sequence=CAI14716.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for PTGS1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for PTGS1 Gene

Protein Expression for PTGS1 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Selected DME Specific Peptides for PTGS1 Gene

P23219:
  • MFAFFAQHFTHQFFKT
  • WLREHNRVCD
  • FNEYRKRF
  • LYHWHPL
  • LGHGVDL
  • AGRIGGGRN
  • PVNPCCYYPCQ
  • CDCTRTG
  • LRLFKDGK
  • FSNVSYYTR
  • VGQEVFGL
  • GNPICSP
  • GPGFTKA
  • DCPTPMG
  • LYGDIDA
  • RLILIGETIKI
  • YWKPSTFGG
  • SWESFSN
  • YSYEQFLFNTSMLVDYGVEALVDAFSRQ
  • FIPDPQG
  • RLFKDGK
  • TVRSNLIPSPPTYN
  • LKFDPELLF
  • GAPFSLKGL

Post-translational modifications for PTGS1 Gene

  • Glycosylation at isoforms=2, 3, 5, 667, Asn103, and Asn143
  • Modification sites at PhosphoSitePlus

Other Protein References for PTGS1 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for PTGS1 (COX-1)
  • Cloud-Clone Corp. Antibodies for PTGS1

Domains & Families for PTGS1 Gene

Gene Families for PTGS1 Gene

IUPHAR :

Protein Domains for PTGS1 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for PTGS1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P23219

UniProtKB/Swiss-Prot:

PGH1_HUMAN :
  • Belongs to the prostaglandin G/H synthase family.
Family:
  • Belongs to the prostaglandin G/H synthase family.
genes like me logo Genes that share domains with PTGS1: view

Function for PTGS1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for PTGS1 Gene

GENATLAS Biochemistry:
prostaglandin G/H synthase 1,constitutively expressed in a wide range of tissues,acting first as a dioxygenase,then as a peroxidase (lipocalin family,Kernel group),monomer,potent mediator of inflammation
UniProtKB/Swiss-Prot CatalyticActivity:
Arachidonate + AH(2) + 2 O(2) = prostaglandin H(2) + A + H(2)O.
UniProtKB/Swiss-Prot Function:
Converts arachidonate to prostaglandin H2 (PGH2), a committed step in prostanoid synthesis. Involved in the constitutive production of prostanoids in particular in the stomach and platelets. In gastric epithelial cells, it is a key step in the generation of prostaglandins, such as prostaglandin E2 (PGE2), which plays an important role in cytoprotection. In platelets, it is involved in the generation of thromboxane A2 (TXA2), which promotes platelet activation and aggregation, vasoconstriction and proliferation of vascular smooth muscle cells.

Enzyme Numbers (IUBMB) for PTGS1 Gene

Gene Ontology (GO) - Molecular Function for PTGS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004601 peroxidase activity TAS --
GO:0004666 prostaglandin-endoperoxide synthase activity TAS --
GO:0016491 oxidoreductase activity IEA --
GO:0020037 heme binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with PTGS1: view
genes like me logo Genes that share phenotypes with PTGS1: view

Animal Models for PTGS1 Gene

MGI Knock Outs for PTGS1:

Animal Model Products

  • Taconic Biosciences Mouse Models for PTGS1

CRISPR Products

Inhibitory RNA Products

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for PTGS1 Gene

Localization for PTGS1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for PTGS1 Gene

Microsome membrane; Peripheral membrane protein. Endoplasmic reticulum membrane; Peripheral membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for PTGS1 gene
Compartment Confidence
extracellular 5
nucleus 5
endoplasmic reticulum 5
golgi apparatus 5
plasma membrane 2
mitochondrion 2
peroxisome 2
cytosol 2
cytoskeleton 1
lysosome 1

Gene Ontology (GO) - Cellular Components for PTGS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001750 photoreceptor outer segment IEA --
GO:0005634 nucleus ISS --
GO:0005737 cytoplasm ISS,IDA --
GO:0005783 endoplasmic reticulum IEA --
GO:0005789 endoplasmic reticulum membrane TAS --
genes like me logo Genes that share ontologies with PTGS1: view

Pathways & Interactions for PTGS1 Gene

genes like me logo Genes that share pathways with PTGS1: view

UniProtKB/Swiss-Prot P23219-PGH1_HUMAN

  • Pathway: Lipid metabolism; prostaglandin biosynthesis.

Gene Ontology (GO) - Biological Process for PTGS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001516 prostaglandin biosynthetic process ISS --
GO:0006629 lipid metabolic process NAS 1907252
GO:0006631 fatty acid metabolic process IEA --
GO:0006633 fatty acid biosynthetic process IEA --
GO:0006693 prostaglandin metabolic process IEA --
genes like me logo Genes that share ontologies with PTGS1: view

No data available for SIGNOR curated interactions for PTGS1 Gene

Drugs & Compounds for PTGS1 Gene

Products:

  1. Drug

(199) Drugs for PTGS1 Gene - From: DrugBank, PharmGKB, ApexBio, DGIdb, FDA Approved Drugs, IUPHAR, HMDB, Tocris, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Acetaminophen Approved Pharma inhibitor, Target Cyclooxygenase inhibitor; may be selective for COX-3 1026
Aspirin Approved, Vet_approved Pharma Channel blocker, inhibitor, Target 1152
Ibuprofen Approved Pharma Channel blocker, inhibitor, Target, Enzyme 518
Indomethacin Approved, Investigational Pharma Partial agonist, Agonist, inhibitor, Target Cox inhibitor, Cyclooxygenase inhibitor (COX-1 > COX-2) 116
Ketoprofen Approved, Vet_approved Pharma Inhibition, Inhibitor, inhibitor, Target 87

(71) Additional Compounds for PTGS1 Gene - From: HMDB, Novoseek, and IUPHAR

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
valerylsalicylate
Inhibition, Inhibitor
2-Hydroxychlorpropamide
36892-36-1
3-Dechloroethylifosfamide
  • Dechloroethylcyclophosphamide
  • N-(2-chloroethyl)-1,3,2-oxazaphosphinan-2-amine 2-oxide
  • N-(2-chloroethyl)-2-oxo-1,3,2$l^{5}-oxazaphosphinan-2-amine
 36761-83-8
3'-Hydroxyhexobarbital
427-29-2
3-Hydroxymethylantipyrine
18125-49-0

(5) Tocris Compounds for PTGS1 Gene

Compound Action Cas Number
Acetaminophen Cyclooxygenase inhibitor; may be selective for COX-3 103-90-2
Celecoxib Selective cyclooxygenase-2 (COX-2) inhibitor 169590-42-5
Indomethacin Cyclooxygenase inhibitor (COX-1 > COX-2) 53-86-1
NS 398 Cyclooxygenase-2 (COX-2) inhibitor 123653-11-2
Resveratrol Cyclooxygenase inhibitor 501-36-0

(61) ApexBio Compounds for PTGS1 Gene

Compound Action Cas Number
(R)-(-)-Ibuprofen 51146-57-7
(S)-(+)-Ibuprofen 51146-56-6
Aceclofenac 89796-99-6
Acemetacin 53164-05-9
Acetaminophen 103-90-2
Amfenac Sodium Monohydrate 61618-27-7
Ampiroxicam 99464-64-9
Asaraldehyde 4460-86-0
Aspirin (Acetylsalicylic acid) Cyclooxygenase (COX) inhibitor 50-78-2
ATB-346 Non-steroidal anti-inflammatory drug 1226895-20-0
Bromfenac Sodium 91714-93-1
Bufexamac 2438-72-4
Celecoxib Selective cyclooxygenase-2 (COX-2) inhibitor 169590-42-5
Deracoxib 169590-41-4
Diclofenac 15307-86-5
Diclofenac Sodium COX inhibitor 15307-79-6
Diosgenin 512-04-9
DuP 697 88149-94-4
Etodolac COX-2 inhibitor 41340-25-4
Etoricoxib Specific COX-2 inhibitor 202409-33-4
Firocoxib 189954-96-9
FK 3311 Selective COX-2 inhibitor 116686-15-8
Flunixin Meglumin 42461-84-7
FR 122047 hydrochloride 130717-51-0
Ibuprofen 15687-27-1
Ibuprofen Lysine COX inhibitor 57469-77-9
Iguratimod COX-2 inhibitor,inhibits IL-1,IL-6,IL-8 and tumour necrosis factor. 123663-49-0
Indomethacin Cox inhibitor 53-86-1
Ketoprofen 22071-15-4
Ketorolac 74103-06-3
Ketorolac tromethamine salt 74103-07-4
Licofelone 156897-06-2
Loganin Cox-1 inhibitor 18524-94-2
Lornoxicam COX-1/COX-2 inhibitor 70374-39-9
Loxoprofen 68767-14-6
Lumiracoxib 220991-20-8
Meclofenamate Sodium 6385-02-0
Mefenamic Acid Anti-inflammatory agent 61-68-7
Meloxicam (Mobic) Nonsteroidal anti-inflammatory drug 71125-38-7
Nabumetone 42924-53-8
Naproxen Sodium cyclooxygenase inhibitor 26159-34-2
NCX 4040 287118-97-2
NCX 466 1262956-64-8
Nepafenac Anti-inflammatory drug (NSAID) 78281-72-8
Nimesulide Non-steroidal anti-inflammatory drug 51803-78-2
Oxaprozin Anti-inflammatory drug 21256-18-8
Parecoxib 198470-84-7
Parecoxib Sodium 198470-85-8
Phenacetin Non-opioid analgesic 62-44-2
Piroxicam Prostaglandin synthesis/Coxinhibitor 36322-90-4
Rofecoxib COX-2 inhibitor 162011-90-7
Salicylic acid 69-72-7
SC 236 170569-86-5
SC 560 COX-1-selective inhibitor 188817-13-2
SC 58125 162054-19-5
Sulindac Anti-inflammatory agent;COX inhibitor 38194-50-2
Tenidap 120210-48-2
Tolfenamic Acid Non-steroidal anti-inflammatory drug 13710-19-5
Triflusal 322-79-2
Valdecoxib COX-2 inhibitor 181695-72-7
Zaltoprofen Cyclooxygenase (COX) inhibitor 74711-43-6
genes like me logo Genes that share compounds with PTGS1: view

Drug Products

Transcripts for PTGS1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for PTGS1 Gene

(11) REFSEQ mRNAs :
(16) Additional mRNA sequences :
(156) Selected AceView cDNA sequences:
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for PTGS1 Gene

Prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase):
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for PTGS1 Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12a · 12b ^ 13 ^ 14a · 14b · 14c · 14d
SP1:
SP2: - -
SP3: - - - -
SP4: - - -
SP5: - -
SP6: - - -
SP7: - - - - -
SP8: - - -

Relevant External Links for PTGS1 Gene

GeneLoc Exon Structure for
PTGS1
ECgene alternative splicing isoforms for
PTGS1

Expression for PTGS1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PTGS1 Gene

mRNA expression in normal human tissues for PTGS1 Gene
mRNA expression by BioGPS for PTGS1 GenemRNA expression by GTEx for PTGS1 Gene

mRNA differential expression in normal tissues according to GTEx for PTGS1 Gene

This gene is overexpressed in Bladder (x10.9), Colon - Sigmoid (x6.6), and Skin - Sun Exposed (Lower leg) (x4.1).

Protein differential expression in normal tissues from HIPED for PTGS1 Gene

This gene is overexpressed in Urinary Bladder (25.0), Platelet (15.5), and Peripheral blood mononuclear cells (10.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for PTGS1 Gene



Protein tissue co-expression partners for PTGS1 Gene

NURSA nuclear receptor signaling pathways regulating expression of PTGS1 Gene:

PTGS1

SOURCE GeneReport for Unigene cluster for PTGS1 Gene:

Hs.201978

Evidence on tissue expression from TISSUES for PTGS1 Gene

  • Blood(4.6)
  • Nervous system(4.6)
  • Lung(4.4)
  • Skin(3)
  • Stomach(2.8)
  • Intestine(2.6)
  • Kidney(2.5)
  • Heart(2.4)
  • Muscle(2.1)
genes like me logo Genes that share expression patterns with PTGS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for PTGS1 Gene

Orthologs for PTGS1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for PTGS1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia PTGS1 34 35
  • 99.12 (n)
dog
(Canis familiaris)
 Mammalia PTGS1 34 35
  • 89.7 (n)
cow
(Bos Taurus)
 Mammalia PTGS1 34 35
  • 89.35 (n)
mouse
(Mus musculus)
 Mammalia Ptgs1 34 16 35
  • 85.76 (n)
rat
(Rattus norvegicus)
 Mammalia Ptgs1 34
  • 84.32 (n)
oppossum
(Monodelphis domestica)
 Mammalia -- 35
  • 78 (a)
 OneToMany
-- 35
  • 73 (a)
 OneToMany
-- 35
  • 71 (a)
 OneToMany
platypus
(Ornithorhynchus anatinus)
 Mammalia PTGS1 35
  • 71 (a)
 OneToOne
chicken
(Gallus gallus)
 Aves PTGS1 34 35
  • 75.97 (n)
lizard
(Anolis carolinensis)
 Reptilia PTGS1 35
  • 69 (a)
 OneToOne
tropical clawed frog
(Silurana tropicalis)
 Amphibia ptgs1 34
  • 69.08 (n)
African clawed frog
(Xenopus laevis)
 Amphibia Xl.6116 34
zebrafish
(Danio rerio)
 Actinopterygii ptgs1 34 35
  • 67.5 (n)
rainbow trout
(Oncorhynchus mykiss)
 Actinopterygii Omy.11882 34
sea squirt
(Ciona savignyi)
 Ascidiacea -- 35
  • 46 (a)
 ManyToMany
CSA.3689 35
  • 43 (a)
 ManyToMany
sea squirt
(Ciona intestinalis)
 Ascidiacea Cin.1052 34
Species where no ortholog for PTGS1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for PTGS1 Gene

ENSEMBL:
Gene Tree for PTGS1 (if available)
TreeFam:
Gene Tree for PTGS1 (if available)

Paralogs for PTGS1 Gene

Paralogs for PTGS1 Gene

(1) SIMAP similar genes for PTGS1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with PTGS1: view

Variants for PTGS1 Gene

Sequence variations from dbSNP and Humsavar for PTGS1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10306114 drug-response 122,370,243(+) GCTGG(A/G)CACTG intron-variant, upstream-variant-2KB
rs1000008072 -- 122,376,477(+) AGTGA(-/GG)AGACT intron-variant
rs1000210449 -- 122,396,187(+) ACATA(C/T)ACAAG downstream-variant-500B
rs1000495531 -- 122,388,494(+) GCTCT(A/T)CCCTT intron-variant
rs1000514376 -- 122,384,766(+) GGAAG(C/G)GGTTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for PTGS1 Gene

Variant ID Type Subtype PubMed ID
esv2417467 CNV deletion 18987734
esv3452014 CNV insertion 20981092
nsv1115230 CNV deletion 24896259
nsv416964 CNV deletion 16902084
nsv831716 CNV gain 17160897

Variation tolerance for PTGS1 Gene

Residual Variation Intolerance Score: 82.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.77; 66.66% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for PTGS1 Gene

Human Gene Mutation Database (HGMD)
PTGS1
SNPedia medical, phenotypic, and genealogical associations of SNPs for
PTGS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for PTGS1 Gene

Disorders for PTGS1 Gene

MalaCards: The human disease database

(23) MalaCards diseases for PTGS1 Gene - From: DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
chronic cystitis
urticaria
gastric ulcer
  • acute gastric ulcer with haemorrhage and perforation
ovarian epithelial cancer
  • eoc
antenatal bartter syndrome
  • hyperprostaglandin e syndrome
- elite association - COSMIC cancer census association via MalaCards
Search PTGS1 in MalaCards View complete list of genes associated with diseases

Relevant External Links for PTGS1

Genetic Association Database (GAD)
PTGS1
Human Genome Epidemiology (HuGE) Navigator
PTGS1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
PTGS1
genes like me logo Genes that share disorders with PTGS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for PTGS1 Gene

Publications for PTGS1 Gene

  1. Influence of cyclooxygenase-1 genotype on ex vivo aspirin response in patients at risk for stroke. (PMID: 19390185) Momary K.M. … Cavallari L.H. (Cerebrovasc. Dis. 2009) 3 22 46 64
  2. Cyclooxygenase-1 haplotype C50T/A-842G does not affect platelet response to aspirin. (PMID: 19350112) Pettinella C. … DavA- G. (Thromb. Haemost. 2009) 3 22 46 64
  3. A polymorphism in the cyclooxygenase 1 gene is associated with decreased inflammatory prostaglandin F2alpha formation and lower risk of cardiovascular disease. (PMID: 19091535) Helmersson J. … Basu S. (Prostaglandins Leukot. Essent. Fatty Acids 2009) 3 22 46 64
  4. Variation in eicosanoid genes, non-fatal myocardial infarction and ischemic stroke. (PMID: 19046748) Lemaitre R.N. … Psaty B.M. (Atherosclerosis 2009) 3 22 46 64
  5. Genetic polymorphisms of cyclooxygenase-1 (COX-1) are associated with functional dyspepsia in Japanese women. (PMID: 18582172) Arisawa T. … Nakano H. (J Womens Health (Larchmt) 2008) 3 22 46 64

Products for PTGS1 Gene

  • Cloud-Clone Corp. Antibodies for PTGS1
  • Cloud-Clone Corp. Proteins for PTGS1
  • Cloud-Clone Corp Assay Kits for PTGS1
  • Addgene plasmids for PTGS1

Sources for PTGS1 Gene

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