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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PTGER2 Gene

protein-coding   GIFtS: 66
GCID: GC14P052781

prostaglandin E receptor 2 (subtype EP2), 53kDa

(Previous names: prostaglandin E receptor 2 (subtype EP2), 53kD )
 Explore 64 diseases affiliated with
PTGER2 via our new
 Human Malady Compendium 
Biological research products
for PTGER2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Prostaglandin E Receptor 2 (Subtype EP2), 53kDa1 2     PGE2 Receptor EP2 Subtype2 3
EP21 2     Prostaglandin E Receptor 2 (Subtype EP2), 53kD1
Prostanoid EP2 Receptor2 3     Prostaglandin E2 Receptor EP2 Subtype2
PGE Receptor EP2 Subtype2 3     

External Ids:    HGNC: 95941   Entrez Gene: 57322   Ensembl: ENSG000001253847   OMIM: 1768045   UniProtKB: P431163   

Export aliases for PTGER2 gene to outside databases

Previous GC identifers: GC14P050103 GC14P046577 GC14P050771 GC14P051850 GC14P032941


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PTGER2:
This gene encodes a receptor for prostaglandin E2, a metabolite of arachidonic acid which has different biologic
activities in a wide range of tissues. Mutations in this gene are associated with aspirin-induced susceptibility to
asthma. (provided by RefSeq, Oct 2009)

UniProtKB/Swiss-Prot: PE2R2_HUMAN, P43116
Function: Receptor for prostaglandin E2 (PGE2). The activity of this receptor is mediated by G(s) proteins that
stimulate adenylate cyclase. The subsequent raise in intracellular cAMP is responsible for the relaxing effect of this
receptor on smooth muscle

summary for PTGER2:
Prostanoid receptors are activated by the endogenous ligands prostaglandin (PG) D2, PGE2, PGF2alpha, PGH2,
prostacyclin (PGI2) and thromboxane A2. Cyclooxygenase (COX) converts arachidonic acid to PGH2, from which
the other prostaglandins are synthesized. Prostanoid receptors are a family of nine G-protein-coupled
receptors that have distinct tissue distributions and actions. EP receptors (EP1-4) are a diverse group of
prostanoid receptors. EP1 receptors are restricted to the kidney lung and stomach and induce smooth muscle
contraction. EP2 and EP4 couple to Galphas and induce smooth muscle relaxation. EP3 is an inhibitory
receptor that prevents smooth muscle relaxation.

Gene Wiki entry for PTGER2 (Prostaglandin E2 receptor)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000014.8  NC_018925.1  NT_026437.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PTGER2 gene promoter:
         TBP   Nkx2-2   Pax-2   Pax-2a   Max   Pax-2b   TFIID   Sox9   ZIC2/Zic2   c-Myc   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): PTGER2 promoter sequence
   Search SABiosciences Chromatin IP Primers for PTGER2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PTGER2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 14q22   Ensembl cytogenetic band:  14q22.1   HGNC cytogenetic band: 14q22

PTGER2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PTGER2 gene location

GeneLoc information about chromosome 14         GeneLoc Exon Structure

GeneLoc location for GC14P052781:  view genomic region     (about GC identifiers)

Start:
52,781,016 bp from pter      End:
52,795,324 bp from pter
Size:
14,309 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PE2R2_HUMAN, P43116 (See protein sequence)
Recommended Name: Prostaglandin E2 receptor EP2 subtype  
Size: 358 amino acids; 39761 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Secondary accessions: D3DSC0 Q52LG8

Explore the universe of human proteins at neXtProt for PTGER2: NX_P43116

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P43116

  • PTGER2 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_000947.2  
    ENSEMBL proteins: 
     ENSP00000450933   ENSP00000245457  
    Reactome Protein details: P43116
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    Uscn Proteins for PTGER2

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane TAS10462542
    GO:0016021integral to membrane ----


    PTGER2 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for PTGER2


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PTGER2 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR017452 GPCR_Rhodpsn_7TM
     IPR008365 Prostanoid_rcpt
     IPR001923 Prostglndn_EP2_rcpt
     IPR000276 GPCR_Rhodpsn

    Graphical View of Domain Structure for InterPro Entry P43116

    ProtoNet protein and cluster: P43116

    1 Blocks protein family: IPB001923 Prostanoid EP2 receptor signature

    UniProtKB/Swiss-Prot: PE2R2_HUMAN, P43116
    Similarity: Belongs to the G-protein coupled receptor 1 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: PE2R2_HUMAN, P43116
    Function: Receptor for prostaglandin E2 (PGE2). The activity of this receptor is mediated by G(s) proteins that
    stimulate adenylate cyclase. The subsequent raise in intracellular cAMP is responsible for the relaxing effect of this
    receptor on smooth muscle

         Genatlas biochemistry entry for PTGER2:
    prostaglandin E2 receptor,subtype EP2,G protein coupled receptor superfamily,expressed in peripheral leukocytes with
    alternatively transcripts in spleen and thymus

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    hsa-miR-4328 hsa-miR-429 hsa-miR-421 hsa-miR-515-5p hsa-miR-141* hsa-miR-7-1* hsa-miR-205* hsa-miR-1183
    SwitchGear 3'UTR luciferase reporter plasmidPTGER2 3' UTR sequence
    Inhib. RNA
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    Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004957prostaglandin E receptor activity IEA--


    PTGER2 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for PTGER2:
     Increased gamma-H2AX phosphory 

    Animal Models:
         Mouse knock-outs for PTGER2: Ptger2tm1Bhk Ptger2tm1Rsz Ptger2tm2Bhk Ptger2tm1Brey Ptger2tm1Sna
         15/18 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Ptger2) (see all 18):
     behavior/neurological  cardiovascular system  cellular  endocrine/exocrine gland  hematopoietic system 
     homeostasis/metabolism  immune system  integument  mortality/aging  muscle 
     nervous system  no phenotypic analysis  other  renal/urinary system  reproductive system 

    PTGER2 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/10 super-pathways (see all 10About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Class A/1 (Rhodopsin-like receptors)
    Class A/1 (Rhodopsin-like receptors)1.00
    GPCRs, Class A Rhodopsin-like0.41
    GPCR ligand binding0.75
    Neuroactive ligand-receptor interaction0.38
    2Prostanoid ligand receptors
    Prostanoid ligand receptors1.00
    Small Ligand GPCRs0.42
    Eicosanoid ligand-binding receptors0.60
    3Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    4PKA activation in glucagon signalling
    Neurophysiological process PGE2-induced pain processing0.44
    Neurophysiological process_PGE2-induced pain processing0.44
    5Platelet Aggregation Inhibitor Pathway, Pharmacodynamics
    Platelet Aggregation Inhibitor Pathway, Pharmacodynamics1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for PTGER2
        Neurophysiological process PGE2-induced pain processing

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for PTGER2
        Colorectal Cancer Metastasis

    1 GeneGo (Thomson Reuters) Pathway for PTGER2
        Neurophysiological process PGE2-induced pain processing

    4 BioSystems Pathways for PTGER2 
        Prostaglandin Synthesis and Regulation
    GPCRs, Class A Rhodopsin-like
    Ovarian Infertility Genes
    Small Ligand GPCRs

    5/8        Reactome Pathways for PTGER2 (see all 8)
        GPCR downstream signaling
    Eicosanoid ligand-binding receptors
    Signaling by GPCR
    GPCR ligand binding
    Class A/1 (Rhodopsin-like receptors)

    2 PharmGKB Pathways for PTGER2
        Celecoxib Pathway, Pharmacodynamics
    Platelet Aggregation Inhibitor Pathway, Pharmacodynamics

    1         Kegg Pathway  (Kegg details for PTGER2):
        Neuroactive ligand-receptor interaction


    PTGER2 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PTGER2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/67 Interacting proteins for PTGER2 (P431163 ENSP000002454574) via UniProtKB, MINT, STRING, and/or I2D (see all 67)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PTGESO146843, ENSP000003423854I2D: score=1 STRING: ENSP00000342385
    PTGDSP412223, ENSP000003606874I2D: score=1 STRING: ENSP00000360687
    PTGFRP430883, ENSP000003597934I2D: score=1 STRING: ENSP00000359793
    ADCY2ENSP000003429524STRING: ENSP00000342952
    ADCY4ENSP000003121264STRING: ENSP00000312126
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007186G-protein coupled receptor signaling pathway TAS10462542
    GO:0007189adenylate cyclase-activating G-protein coupled receptor signaling pathway ISS--
    GO:0032496response to lipopolysaccharide IEA--
    GO:0042127regulation of cell proliferation IEA--
    GO:0071380cellular response to prostaglandin E stimulus ISS--


    PTGER2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    PTGER2 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for PTGER2 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    16,16-Dimethyl Prostaglandin E2 Synthetic prostaglandin E2 (Cat. No. 2296) derivative; regulates HSC development[39746-25-3]
    AlprostadilProstaglandin. Vasodilator and antiplatelet agent in vivo[745-65-3]
    AH 6809EP1 and EP2 receptor antagonist[33458-93-4]
    Prostaglandin E2Major endogenous prostanoid[363-24-6]

    2 HMDB Compounds for PTGER2    About this table
    CompoundSynonyms CAS #PubMed Ids
    Cyclic AMPCyclic AMP (see all 19)60-92-4--
    Prostaglandin E2(-)-Prostaglandin E2 (see all 22)363-24-6--

    3 DrugBank Compounds for PTGER2    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    DinoprostoneDinoprostone Prostaglandin E2 (see all 3)363-24-6targetagonist18715952 19788928 20599704 11752352 17329241
    Misoprostol-- 59122-46-2targetagonist16039053 18472336 11602631 12097143 9313928
    Alprostadil-- 745-65-3targetagonist10509658 11752352 15840408

    10/50 Novoseek chemical compound relationships for PTGER2 gene (see all 50)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    butaprost 96.9 52 16262658 (2), 8590276 (2), 18597941 (2), 12724323 (1) (see all 41)
    sulprostone 93.4 15 16168007 (1), 7532011 (1), 9531979 (1), 15464062 (1) (see all 15)
    pge2 93 309 14751245 (4), 15746982 (4), 10697805 (4), 12738687 (4) (see all 99)
    11-deoxy-pge1 92 11 8435410 (1), 9531979 (1), 12753465 (1), 15290741 (1) (see all 9)
    ah 6809 91.8 5 19539567 (1), 12429018 (1), 16020747 (1), 16456101 (1)
    ah23848 89.3 1 9888433 (1)
    gr 63799x 88.3 2 15464062 (1), 8641211 (1)
    prostaglandin 87.3 51 19570035 (2), 8078484 (2), 8590276 (2), 12228765 (1) (see all 33)
    pge1 alcohol 86.8 1 15769457 (1)
    17-phenyl-trinor-pge2 85.7 2 16516814 (1)

    Search CenterWatch for drugs/clinical trials and news about PTGER2 / PE2R2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PTGER2 gene: 
    NM_000956.3  

    Unigene Cluster for PTGER2:

    Prostaglandin E receptor 2 (subtype EP2), 53kDa
    Hs.2090  [show with all ESTs]
    Unigene Representative Sequence: NM_000956
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000557436 ENST00000245457(uc001wzr.3)

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    hsa-miR-4328 hsa-miR-429 hsa-miR-421 hsa-miR-515-5p hsa-miR-141* hsa-miR-7-1* hsa-miR-205* hsa-miR-1183
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PTGER2
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PTGER2

    Additional cDNA sequence: 

    AY275471.1 BC093927.1 BC093929.1 U19487.1 X83868.1 

    3 DOTS entries:

    DT.409452  DT.120773770  DT.95357797 

    1 AceView cDNA sequence:

    BF029797 

    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for PTGER2    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b
    SP1:                              
    SP2:                              


    ECgene alternative splicing isoforms for PTGER2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PTGER2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TAAATGTAAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    PTGER2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    3 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Skeletal MuscleHyoid Arch MusclesMyoblastsSkeletal Muscle
    Skeletal MuscleMandibular Arch MusclesMyoblastsSkeletal Muscle
    KidneyGlomerulusKidney
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 7 LifeMap Cells 
    NameCategory
    PureStem™ mesenchymal progenitor MEL2 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage
    PureStem™ mesenchymal progenitor 7PEND24 (Embryonic Progenitor Cell)Cartilage, Neural Crest
    PureStem™ progenitor EN7 (Embryonic Progenitor Cell)
    PureStem™ progenitor SK17 (Embryonic Progenitor Cell)
    PureStem™ progenitor W10 (Embryonic Progenitor Cell)
    PureStem™ progenitor W8 (Embryonic Progenitor Cell)
    Mast-like cells (Generation of hemato...)

    See PTGER2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PTGER2

    SOURCE GeneReport for Unigene cluster: Hs.2090

    UniProtKB/Swiss-Prot: PE2R2_HUMAN, P43116
    Tissue specificity: Placenta and lung

        SABiosciences Expression via Pathway-Focused PCR Arrays including PTGER2: 
              G Protein Coupled Receptors 384HT in human mouse rat
              Neurotrophins & Receptors in human mouse rat
              T-Cell Anergy & Immune Tolerance in human mouse rat

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PTGER2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for PTGER2 gene from 4/15 species (see all 15)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves PTGER21 prostaglandin E receptor 2 (subtype EP2), 53kDa 65.69(n)
    61.7(a)
      100034745  NM_001083365.1  NP_001076834.1 
    lizard
    (Anolis carolinensis)
    Reptilia PTGER26
    --
    47(a)
    1 ↔ 1
    AAWZ02038448(7803-10385)
    zebrafish
    (Danio rerio)
    Actinopterygii ptger2b1 prostaglandin E receptor 2b (subtype EP2) 52.29(n)
    49.67(a)
      570410  NM_001030250.1  NP_001025421.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG74976
    --
    14(a)
    possible ortholog
    3L(17626549-17630975)


    ENSEMBL Gene Tree for PTGER2 (if available)
    TreeFam Gene Tree for PTGER2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PTGER2 gene
    PTGDR2  PTGER12  PTGER42  PTGER32  PTGFR2  TBXA2R2  PTGIR2  
    3 SIMAP similar genes for PTGER2 using alignment to 2 protein entries:     PE2R2_HUMAN (see all proteins):
    PTGDR    PTGIR    PTGER4

    PTGER2 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/279 NCBI SNPs in PTGER2 are shown (see all 279    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 14 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs454647951,2
    C,F,--32939624(+) TGTGAG/AGGGCC 1 -- us2k15Minor allele frequency- A:0.04NS NA WA 332
    rs455429381,2
    C,--32939741(+) CTATAA/CATCAT 1 -- us2k12Minor allele frequency- C:0.01NS 90
    rs456146371,2
    C,--32939748(+) TCATAG/CTGTTT 1 -- us2k13Minor allele frequency- C:0.02NS WA 208
    rs286007951,2
    C,F,--32940036(+) CTTGTT/CCTAGT 1 -- us2k15Minor allele frequency- C:0.12NS NA WA 212
    rs355318401,2
    C--32940052(+) MCCCCC/ACCCAA 1 -- us2k11Minor allele frequency- A:0.00NA 2
    rs101425541,2
    C,F,--32940575(+) AACACA/GATTCT 1 -- us2k16Minor allele frequency- G:0.11NS NA WA 210
    rs454875001,2
    C,F,--32940625(+) CAAGTG/AGTTAT 1 -- us2k15Minor allele frequency- A:0.07NS CSA WA NA 326
    rs1120799231,2
    --32940744(+) GACACG/ACTTGC 1 -- us2k11Minor allele frequency- A:0.50CSA 2
    rs792400961,2
    --32940825(+) AACATT/CCTGGT 1 -- us2k13Minor allele frequency- C:0.06CSA WA NA 240
    rs347576971,2
    --32941077(+) GAAACA/GCCGCT 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for PTGER2 (52781016 - 52795324 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for PTGER2: --
    Human Gene Mutation Database (HGMD): PTGER2

    SABiosciences Cancer Mutation PCR Assays
    Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PTGER2
    DNA2.0 Custom Variant and Variant Library Synthesis for PTGER2

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PTGER2 for disorders           About GeneDecksing

    OMIM gene information: 176804   
    OMIM disorders: 208550  
    20/64 diseases for PTGER2 (see all 64):    About MalaCards
    asthma, aspirin-induced    spinal cord injury    asthma    familial adenomatous polyposis
    patent ductus arteriosus    amyotrophic lateral sclerosis    lateral sclerosis    ocular hypotension
    barrett's esophagus    keshan disease    esophageal squamous cell carcinoma    squamous cell carcinoma
    gastric ulcer    neurodegenerative disease    herpes simplex    polyposis
    periodontal disease    endometrial carcinoma    essential hypertension    periodontitis

    1 disease from the University of Copenhagen DISEASES database for PTGER2:
    Keshan disease

    10/24 Novoseek disease relationships for PTGER2 gene (see all 24)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    intestinal polyps 40.2 3 11533709 (2), 15247185 (1)
    colon cancer 33.7 6 15247185 (2), 17555711 (1), 16293724 (1), 19050969 (1)
    inflammation 32.1 6 18825663 (2), 15496426 (1), 12566441 (1), 20200425 (1) (see all 5)
    periodontal diseases 24.3 1 10697805 (1)
    necrosis 18.6 2 10697805 (1), 12586778 (1)
    tumors 17.7 17 14751245 (1), 18790761 (1), 10697805 (1), 17533365 (1) (see all 11)
    carcinoma non-small cell lung 11.6 1 14751245 (1)
    lung carcinoma 7.37 3 14751245 (3)
    amyotrophic lateral sclerosis 2.56 1 18825663 (1)
    cancer 0.862 2 12566441 (1), 15247185 (1)

    Human Genome Epidemiology (HuGE) Navigator: PTGER2 (20 documents)

    Export disorders for PTGER2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PTGER2 gene, integrated from 9 sources (see all 360):
    (articles sorted by number of sources associating them with PTGER2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Cloning of a novel human prostaglandin receptor with characteristics of the pharmacologically defined EP2 subtype. (PubMed id 8078484)1, 2, 9 Regan J.W.... Gil D.W. (1994)
    2. Cloning and expression of the EP2 subtype of human receptors for prostaglandin E2. (PubMed id 8250933)1, 3, 9 An S.... Goetzl E.J. (1993)
    3. Chromosomal localization of the human prostanoid receptor gene family. (PubMed id 7759114)1, 3, 9 Duncan A.M....Adam M. (1995)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. Cloning, structural characterization, and chromosomal localization of the gene encoding the human prostaglandin E2 receptor EP2 subtype. (PubMed id 10521663)1, 2 Smock S.L.... Owen T.A. (1999)
    6. Prognostic role of PGE2 receptor EP2 in esophageal squamous cell carcinoma. (PubMed id 19050969)1, 9 Kuo K.T....Wang L.S. (2009)
    7. Epigenetic silencing of prostaglandin E receptor 2 (PTGER2) is associated with progression of neuroblastomas. (PubMed id 17533365)1, 9 Sugino Y....Inazawa J. (2007)
    8. Activation of prostaglandin E2-receptor EP2 and EP4 pathways induces growth inhibition in human gastric carcinoma cell lines. (PubMed id 12228765)1, 9 Okuyama T....Kinoshita Y. (2002)
    9. Identification of transcriptional targets of Wnt/beta -catenin signaling in dermal papilla cells of human scalp hair follicles: EP2 i s a novel transcriptional target of Wnt3a. (PubMed id 20347274)1, 9 Shin H....Sung Y.K. (2010)
    10. Prostaglandin E2 differentially modulates proinflamma tory/prodestructive effects of TNF-alpha on synovial fibroblasts via specific E prostanoid receptors/cAMP. (PubMed id 19542367)1, 9 Kunisch E....Kinne R.W. (2009)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5732 HGNC: 9594 AceView: PTGER2.1 Ensembl:ENSG00000125384 euGenes: HUgn5732
    ECgene: PTGER2 Kegg: 5732 H-InvDB: PTGER2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PTGER2 Pharmacogenomics, SNPs, Pathways
    SeattleSNPshttp://pga.gs.washington.edu/data/ptger2/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PTGER2 gene:
    Search GeneIP for patents involving PTGER2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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