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Aliases for PSKH2 Gene

Aliases for PSKH2 Gene

  • Protein Serine Kinase H2 2 3 4
  • EC 2.7.11.1 4 63
  • PSK-H2 3 4
  • Serine/Threonine-Protein Kinase H2 3
  • Serine/Threonine Kinase PSKH2 3
  • EC 2.7.11 63

External Ids for PSKH2 Gene

Previous GeneCards Identifiers for PSKH2 Gene

  • GC08M085649
  • GC08M086792
  • GC08M087017
  • GC08M087129
  • GC08M082270
  • GC08M087060

Summaries for PSKH2 Gene

GeneCards Summary for PSKH2 Gene

PSKH2 (Protein Serine Kinase H2) is a Protein Coding gene. GO annotations related to this gene include protein serine/threonine kinase activity. An important paralog of this gene is DCX.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PSKH2 Gene

Genomics for PSKH2 Gene

Regulatory Elements for PSKH2 Gene

Genomic Location for PSKH2 Gene

Start:
86,048,373 bp from pter
End:
86,088,621 bp from pter
Size:
40,249 bases
Orientation:
Minus strand

Genomic View for PSKH2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PSKH2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PSKH2 Gene

Proteins for PSKH2 Gene

  • Protein details for PSKH2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96QS6-KPSH2_HUMAN
    Recommended name:
    Serine/threonine-protein kinase H2
    Protein Accession:
    Q96QS6
    Secondary Accessions:
    • A0AV22

    Protein attributes for PSKH2 Gene

    Size:
    385 amino acids
    Molecular mass:
    43027 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PSKH2 Gene

Proteomics data for PSKH2 Gene at MOPED

Post-translational modifications for PSKH2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for PSKH2 Gene

ENSEMBL proteins:
REFSEQ proteins:

Domains for PSKH2 Gene

Gene Families for PSKH2 Gene

Suggested Antigen Peptide Sequences for PSKH2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96QS6

UniProtKB/Swiss-Prot:

KPSH2_HUMAN :
  • Q96QS6
Domain:
  • Contains 1 protein kinase domain.
Family:
  • Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family.
genes like me logo Genes that share domains with PSKH2: view

Function for PSKH2 Gene

Molecular function for PSKH2 Gene

UniProtKB/Swiss-Prot CatalyticActivity: ATP + a protein = ADP + a phosphoprotein

Enzyme Numbers (IUBMB) for PSKH2 Gene

Gene Ontology (GO) - Molecular Function for PSKH2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004672 protein kinase activity --
GO:0004674 protein serine/threonine kinase activity IEA --
GO:0004713 protein tyrosine kinase activity --
GO:0005524 ATP binding IEA --
GO:0016772 transferase activity, transferring phosphorus-containing groups --
genes like me logo Genes that share ontologies with PSKH2: view
genes like me logo Genes that share phenotypes with PSKH2: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for PSKH2

In Situ Assay Products

Flow Cytometry Products

No data available for Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for PSKH2 Gene

Localization for PSKH2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for PSKH2 Gene COMPARTMENTS Subcellular localization image for PSKH2 gene
Compartment Confidence
cytosol 2
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for PSKH2 Gene

Pathways for PSKH2 Gene

SuperPathways for PSKH2 Gene

No Data Available

Interacting Proteins for PSKH2 Gene

Gene Ontology (GO) - Biological Process for PSKH2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006468 protein phosphorylation IEA --
genes like me logo Genes that share ontologies with PSKH2: view

No data available for Pathways by source for PSKH2 Gene

Compounds for PSKH2 Gene

(2) HMDB Compounds for PSKH2 Gene

Compound Synonyms Cas Number PubMed IDs
Adenosine triphosphate
  • 5'-(tetrahydrogen triphosphate) Adenosine
56-65-5
ADP
  • adenosindiphosphorsaeure
58-64-0
genes like me logo Genes that share compounds with PSKH2: view

Transcripts for PSKH2 Gene

mRNA/cDNA for PSKH2 Gene

(4) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(2) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for PSKH2 Gene

Protein serine kinase H2:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for PSKH2

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for PSKH2
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for PSKH2 Gene

No ASD Table

Relevant External Links for PSKH2 Gene

GeneLoc Exon Structure for
PSKH2
ECgene alternative splicing isoforms for
PSKH2

Expression for PSKH2 Gene

mRNA expression in normal human tissues for PSKH2 Gene

mRNA differential expression in normal tissues according to GTEx for PSKH2 Gene

This gene is overexpressed in Testis (21.3), Kidney - Cortex (17.1), Brain - Putamen (basal ganglia) (5.2), Brain - Hippocampus (5.1), and Brain - Hypothalamus (4.3).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for PSKH2 Gene

SOURCE GeneReport for Unigene cluster for PSKH2 Gene Hs.680136

genes like me logo Genes that share expressions with PSKH2: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for PSKH2 Gene

Orthologs for PSKH2 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for PSKH2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia PSKH2 35
  • 98.35 (n)
  • 97.4 (a)
PSKH2 36
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia PSKH2 35
  • 86.42 (n)
  • 82.51 (a)
PSKH2 36
  • 83 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia PSKH2 36
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia PSKH2 36
  • 71 (a)
OneToOne
chicken
(Gallus gallus)
Aves -- 36
  • 31 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 35 (a)
ManyToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100497280 35
  • 67.26 (n)
  • 67.55 (a)
zebrafish
(Danio rerio)
Actinopterygii PSKH2 36
  • 46 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea R06A10.4 36
  • 36 (a)
OneToMany
R06A10.4 37
  • 44 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes CMK1 36
  • 25 (a)
ManyToMany
CMK2 36
  • 24 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 53 (a)
OneToMany
Species with no ortholog for PSKH2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for PSKH2 Gene

ENSEMBL:
Gene Tree for PSKH2 (if available)
TreeFam:
Gene Tree for PSKH2 (if available)

Paralogs for PSKH2 Gene

genes like me logo Genes that share paralogs with PSKH2: view

Variants for PSKH2 Gene

Sequence variations from dbSNP and Humsavar for PSKH2 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs958099 -- 86,055,621(-) AAGCT(G/T)TAATT intron-variant
rs981711 -- 86,063,921(-) GAGTG(C/G)GGCTT intron-variant
rs1384877 -- 86,054,473(+) CTTTG(A/T)TAGTA intron-variant
rs1483774 -- 86,058,999(+) CAGTG(C/G)TGCAA intron-variant
rs1483775 -- 86,059,563(+) tagtc(A/G)tatct intron-variant

Structural Variations from Database of Genomic Variants (DGV) for PSKH2 Gene

Variant ID Type Subtype PubMed ID
nsv428204 CNV Gain 18775914
nsv891146 CNV Gain 21882294
nsv891147 CNV Gain 21882294
dgv7830n71 CNV Gain 21882294
esv273774 CNV Insertion 20981092
esv268395 CNV Insertion 20981092

Relevant External Links for PSKH2 Gene

HapMap Linkage Disequilibrium report
PSKH2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for PSKH2 Gene

Disorders for PSKH2 Gene

Relevant External Links for PSKH2

Genetic Association Database (GAD)
PSKH2
Human Genome Epidemiology (HuGE) Navigator
PSKH2
genes like me logo Genes that share disorders with PSKH2: view

No data available for UniProtKB/Swiss-Prot for PSKH2 Gene

Publications for PSKH2 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Quantitative analysis of HSP90-client interactions reveals principles of substrate recognition. (PMID: 22939624) Taipale M. … Lindquist S. (Cell 2012) 3
  3. Single-nucleotide polymorphisms, acute rejection, and severity of tubulitis in kidney transplantation, accounting for center-to-center variation. (PMID: 21085059) Israni A. … Oetting W.S. (Transplantation 2010) 48
  4. Patterns of somatic mutation in human cancer genomes. (PMID: 17344846) Greenman C. … Stratton M.R. (Nature 2007) 4
  5. The protein kinase complement of the human genome. (PMID: 12471243) Manning G. … Sudarsanam S. (Science 2002) 3

Products for PSKH2 Gene

Sources for PSKH2 Gene

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