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Aliases for PRSS55 Gene

Aliases for PRSS55 Gene

  • Protease, Serine 55 2 3 5
  • Testis Serine Protease 1 3 4
  • T-SP1 3 4
  • TSP1 3 4
  • Probable Serine Protease UNQ9391/PRO34284 3
  • Tryptophan/Serine Protease 3
  • Serine Protease 55 3
  • EC 3.4.21.- 4
  • UNQ9391 3
  • CT153 3

External Ids for PRSS55 Gene

Previous GeneCards Identifiers for PRSS55 Gene

  • GC08P010383
  • GC08P009313

Summaries for PRSS55 Gene

Entrez Gene Summary for PRSS55 Gene

  • This gene encodes a member of a group of membrane-anchored chymotrypsin (S1)-like serine proteases. The enocoded protein is primarily expressed in the Leydig and Sertoli cells of the testis and may be involved in male fertility. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2010]

GeneCards Summary for PRSS55 Gene

PRSS55 (Protease, Serine 55) is a Protein Coding gene. GO annotations related to this gene include serine-type endopeptidase activity. An important paralog of this gene is PRSS54.

UniProtKB/Swiss-Prot for PRSS55 Gene

  • Probable serine protease.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PRSS55 Gene

Genomics for PRSS55 Gene

Regulatory Elements for PRSS55 Gene

Enhancers for PRSS55 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F010965 0.7 FANTOM5 16.6 +440.3 440280 0.2 POLR2A C8orf74 PRSS55 ENSG00000254936 GC08P010967 PIR55470 PIR49045
GH08F010528 0.4 FANTOM5 15.4 +3.2 3155 0.1 ZNF316 MAFG JUNB EMSY MAFK EP300 PRSS55 PRSS51
GH08F010545 0.2 ENCODE 11.9 +20.4 20429 0.2 SMARCA4 POLR2A PBX2 PRSS55 PRSS51
GH08F010547 1 Ensembl ENCODE 6.6 +22.8 22768 1.2 BCOR CTCF ZMYM3 ZNF2 RAD21 POLR2A ZNF143 SMC3 TCF7L2 ZNF654 PRSS55 ENSG00000272505 PRSS52P PRSS51 GC08P010560
GH08F010342 0.2 ENCODE 6.4 -182.0 -182033 1.5 GATA3 TEAD4 POU5F1 KDM1A PRSS55 ENSG00000255310 ENSG00000261451 PIR53849 PIR43128
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around PRSS55 on UCSC Golden Path with GeneCards custom track

Genomic Location for PRSS55 Gene

Chromosome:
8
Start:
10,525,477 bp from pter
End:
10,554,166 bp from pter
Size:
28,690 bases
Orientation:
Plus strand

Genomic View for PRSS55 Gene

Genes around PRSS55 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PRSS55 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRSS55 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRSS55 Gene

Proteins for PRSS55 Gene

  • Protein details for PRSS55 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UWB4-PRS55_HUMAN
    Recommended name:
    Serine protease 55
    Protein Accession:
    Q6UWB4
    Secondary Accessions:
    • E5RJX5

    Protein attributes for PRSS55 Gene

    Size:
    352 amino acids
    Molecular mass:
    38856 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for PRSS55 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for PRSS55 Gene

Post-translational modifications for PRSS55 Gene

Other Protein References for PRSS55 Gene

No data available for DME Specific Peptides for PRSS55 Gene

Domains & Families for PRSS55 Gene

Gene Families for PRSS55 Gene

Suggested Antigen Peptide Sequences for PRSS55 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6UWB4

UniProtKB/Swiss-Prot:

PRS55_HUMAN :
  • Contains 1 peptidase S1 domain.
  • Belongs to the peptidase S1 family.
Domain:
  • Contains 1 peptidase S1 domain.
Family:
  • Belongs to the peptidase S1 family.
genes like me logo Genes that share domains with PRSS55: view

Function for PRSS55 Gene

Molecular function for PRSS55 Gene

UniProtKB/Swiss-Prot Function:
Probable serine protease.

Enzyme Numbers (IUBMB) for PRSS55 Gene

Gene Ontology (GO) - Molecular Function for PRSS55 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004252 serine-type endopeptidase activity IEA --
GO:0008233 peptidase activity IEA --
GO:0008236 serine-type peptidase activity IEA --
GO:0016787 hydrolase activity IEA --
genes like me logo Genes that share ontologies with PRSS55: view
genes like me logo Genes that share phenotypes with PRSS55: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRSS55 Gene

Localization for PRSS55 Gene

Subcellular locations from UniProtKB/Swiss-Prot for PRSS55 Gene

Isoform 1: Membrane; Single-pass type I membrane protein.
Isoform 2: Cytoplasm, cytosol.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for PRSS55 Gene COMPARTMENTS Subcellular localization image for PRSS55 gene
Compartment Confidence
cytosol 5
extracellular 3

Gene Ontology (GO) - Cellular Components for PRSS55 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005829 cytosol IEA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with PRSS55: view

Pathways & Interactions for PRSS55 Gene

SuperPathways for PRSS55 Gene

No Data Available

Interacting Proteins for PRSS55 Gene

Gene Ontology (GO) - Biological Process for PRSS55 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IEA --
genes like me logo Genes that share ontologies with PRSS55: view

No data available for Pathways by source and SIGNOR curated interactions for PRSS55 Gene

Transcripts for PRSS55 Gene

mRNA/cDNA for PRSS55 Gene

(5) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(11) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for PRSS55 Gene

Protease, serine, 55:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for PRSS55 Gene

ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6
SP1: - -
SP2: -

Relevant External Links for PRSS55 Gene

GeneLoc Exon Structure for
PRSS55
ECgene alternative splicing isoforms for
PRSS55

Expression for PRSS55 Gene

mRNA expression in normal human tissues for PRSS55 Gene

mRNA differential expression in normal tissues according to GTEx for PRSS55 Gene

This gene is overexpressed in Testis (x38.2).

Protein differential expression in normal tissues from HIPED for PRSS55 Gene

This gene is overexpressed in Plasma (67.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for PRSS55 Gene



Protein tissue co-expression partners for PRSS55 Gene

NURSA nuclear receptor signaling pathways regulating expression of PRSS55 Gene:

PRSS55

SOURCE GeneReport for Unigene cluster for PRSS55 Gene:

Hs.591394

mRNA Expression by UniProt/SwissProt for PRSS55 Gene:

Q6UWB4-PRS55_HUMAN
Tissue specificity: Only detected in testis. Expressed in spermatogonia, spermatocytes, spermatids, Leydig and Sertoli cells. Expressed in prostate cancer and ovarian cancer (at protein level).
genes like me logo Genes that share expression patterns with PRSS55: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for PRSS55 Gene

Orthologs for PRSS55 Gene

This gene was present in the common ancestor of animals.

Orthologs for PRSS55 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia PRSS55 34 35
  • 98.33 (n)
dog
(Canis familiaris)
Mammalia PRSS55 34 35
  • 80.18 (n)
rat
(Rattus norvegicus)
Mammalia Prss55 34
  • 73.04 (n)
mouse
(Mus musculus)
Mammalia Prss55 34 16 35
  • 72.37 (n)
cow
(Bos Taurus)
Mammalia PRSS55 35
  • 61 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia PRSS55 35
  • 40 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia PRSS55 35
  • 34 (a)
OneToOne
chicken
(Gallus gallus)
Aves PRSS55 34 35
  • 55.73 (n)
lizard
(Anolis carolinensis)
Reptilia PRSS55 35
  • 33 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta CLIPD3 34
  • 46.75 (n)
fruit fly
(Drosophila melanogaster)
Insecta CG18478 35
  • 27 (a)
ManyToMany
CG31827 35
  • 27 (a)
ManyToMany
CG4259 35
  • 24 (a)
ManyToMany
CG18557 35
  • 23 (a)
ManyToMany
CG3117 35
  • 23 (a)
ManyToMany
CG14990 35
  • 22 (a)
ManyToMany
CG5390 35
  • 20 (a)
ManyToMany
CG13318 35
  • 19 (a)
ManyToMany
CG18563 35
  • 19 (a)
ManyToMany
CG40160 35
  • 19 (a)
ManyToMany
CG8586 35
  • 19 (a)
ManyToMany
CG9377 35
  • 19 (a)
ManyToMany
CG6639 35
  • 17 (a)
ManyToMany
CG8738 35
  • 17 (a)
ManyToMany
CG18477 35
  • 15 (a)
ManyToMany
CG31780 35
  • 15 (a)
ManyToMany
CG4793 35
  • 10 (a)
ManyToMany
scaf 35
  • 10 (a)
ManyToMany
CG4998 35
  • 7 (a)
ManyToMany
Species where no ortholog for PRSS55 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for PRSS55 Gene

ENSEMBL:
Gene Tree for PRSS55 (if available)
TreeFam:
Gene Tree for PRSS55 (if available)

Paralogs for PRSS55 Gene

Variants for PRSS55 Gene

Sequence variations from dbSNP and Humsavar for PRSS55 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs10086002 -- 10,534,407(+) ATTTA(C/T)TCTAG intron-variant
rs10088572 -- 10,540,226(+) TCCCT(C/T)GAGAA intron-variant
rs10091829 -- 10,541,302(+) actgt(C/G)acgaa intron-variant, nc-transcript-variant
rs10094817 -- 10,537,714(+) aaaca(C/T)acaaa intron-variant
rs10094938 -- 10,537,816(+) AGCCC(G/T)TTCTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for PRSS55 Gene

Variant ID Type Subtype PubMed ID
esv3572508 CNV loss 25503493
nsv1025557 CNV gain 25217958
nsv1026918 CNV loss 25217958
nsv1030934 CNV gain 25217958
nsv610267 CNV gain 21841781
nsv610268 CNV loss 21841781

Variation tolerance for PRSS55 Gene

Residual Variation Intolerance Score: 96.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 7.70; 83.03% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for PRSS55 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PRSS55

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for PRSS55 Gene

Disorders for PRSS55 Gene

Relevant External Links for PRSS55

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
PRSS55

No disorders were found for PRSS55 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PRSS55 Gene

Publications for PRSS55 Gene

  1. T-SP1: a novel serine protease-like protein predominantly expressed in testis. (PMID: 18844450) Neth P. … Jochum M. (Biol. Chem. 2008) 2 3 4 64
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4 64
  3. Scanning of novel cancer/testis proteins by human testis proteomic analysis. (PMID: 23436708) Liu M. … Sha J. (Proteomics 2013) 3 4 64
  4. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3 64
  5. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4 64

Products for PRSS55 Gene

Sources for PRSS55 Gene

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