PRSS45 Gene
protein-coding GIFtS : 41
GCID: GC03 M046783
protease, serine, 45
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Aliasesfor PRSS45 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Protease, Serine, 45 1 2 TESSP51 2 3 Testis Serine Protease 52 3 Putative Testis Serine Protease 52 Serine Protease 452 EC 3.4.21.-3
Export aliases for PRSS45 gene to outside databases Previous GC identifer: GC03M046761
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Summariesfor PRSS45 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section --
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Genomic Viewsfor PRSS45 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000003.11 NC_018914.1 NT_022517.18 Regulatory elements: Search SABiosciences Regulatory transcription factor binding sites for PRSS45 Other transcription factors Search SABiosciences Chromatin IP Primers for PRSS45 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PRSS45
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 3p21.31 Ensembl cytogenetic band: 3p21.31 HGNC cytogenetic band: 3p21.31 PRSS45 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 3 GeneLoc Exon Structure
GeneLoc location for GC03M046783: view genomic region
(about GC identifiers )
Start:
46,783,581 bp from pter
End:
46,854,048 bp from pter
Size:
70,468 bases
Orientation:
minus strand
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Proteinsfor PRSS45 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: PRS45_HUMAN, Q7RTY3 (See
protein sequence )Recommended Name: Serine protease 45 Size : 260 amino acids; 29329 Da
Secondary accessions : A3KN77Alternative splicing : 2 isoforms : Q7RTY3-1 Q7RTY3-2 Explore the universe of human proteins at neXtProt for PRSS45: NX_Q7RTY3 PRSS45 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_954652.2 ENSEMBL proteins: ENSP00000429264 ENSP00000401932 Human Recombinant Protein Products: PRSS45 Antibody Products: Assay Products for PRSS45:
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Protein
Domains / Familiesfor PRSS45 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PRSS45 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q7RTY3 ProtoNet protein and cluster: Q7RTY3
2 Blocks protein families : IPB001254 Serine protease IPB001314 Chymotrypsin serine protease family (S1) signature UniProtKB/Swiss-Prot: PRS45_HUMAN, Q7RTY3 Similarity : Belongs to the peptidase S1 familySimilarity : Contains 1 peptidase S1 domain
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Functionfor PRSS45 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Enzyme Number (IUBMB): EC 3.4.21.- 1 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRSS45 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRSS45OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: PRSS45 (NM_199183 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PRSS45 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PRSS45
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRSS45
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0004252 serine-type endopeptidase activity
IEA --
PRSS45 for ontologies About GeneDecksing 1 GenomeRNAi human phenotype for PRSS45 :
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Pathways & Interactionsfor PRSS45 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for PRSS45 Gene Ontology (GO): 1 biological process term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0006508 proteolysis
IEA --
PRSS45 for ontologies About GeneDecksing
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Drugs & Compoundsfor PRSS45 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for PRSS45 Search CenterWatch for drugs/clinical trials and news about PRSS45 / PRS45
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Transcriptsfor PRSS45 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
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SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for PRSS45 gene: NM_199183.2 Unigene Cluster for PRSS45:
Protease, serine, 45 Hs.667712 [show with all ESTs ] Unigene Representative Sequence: NM_199183 2 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000423292 (uc010hjl.3 uc011bam.2 ) ENST00000442359 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRSS45 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRSS45OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: PRSS45 (NM_199183 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PRSS45 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PRSS45
Additional cDNA sequence: BC133695.1
1 DOTS entry : DT.101977049
24/37 AceView cDNA sequences (see all 37 ):
AW139922 CA389034 BF593342 BU786187 AF100707 AI420868 BN000137 AI201486 AK097666 NM_199183 CA389033 BC037775 CD358812 AI935051 AI057441 BE672200 BI915629 CB052308 BC033016 BQ787879 BI461252 AW183721 BU947395 NM_013270 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for PRSS45 About this scheme ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15a · 15b ^ 16a · 16b ^ 17 ^ 18 ^ 19 ^ 20 SP1 :     -       -   -       -   -   -   -   -   -   -     -                   SP2 :             -                                         SP3 :                                       -   -             SP4 :                                                    
ECgene alternative splicing isoforms for PRSS45
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Expression for PRSS45 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section PRSS45 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TGCAAACTTG
About this image PRSS45 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Kidney Glomerulus Kidney Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See PRSS45 Protein Expression from SPIRE MOPED and PaxDB SOURCE GeneReport for Unigene cluster: Hs.667712 SABiosciences Custom PCR Arrays for PRSS45 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PRSS45Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat PRSS45 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PRSS45 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PRSS45 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRSS45
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Orthologsfor PRSS45 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for PRSS45 gene from 1/15 species (see all 15 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
fruit fly (Drosophila melanogaster)
Insecta
CG16326
--
5(a)
possible ortholog
X(8146705-8166495)
ENSEMBL Gene Tree for PRSS45 (if available)TreeFam Gene Tree for PRSS45 (if available)
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Paralogsfor PRSS45 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for PRSS45 gene PRSS46 2 PRSS55 2 PRSS48 2 PRSS22 2 PRSS27 2 PRSS21 2 TPSG1 2 TPSD1 2 PRSS38 2 TPSAB1 2 PRSS53 2 PRSS50 2 PRSS42 2 PRSS36 2 PRSS33 2 KLKB1 2 PRSS8 2 F11 2 OVCH1 2 18/98 SIMAP similar genes for PRSS45 using alignment to 2 protein entries: PRS45_HUMAN (see all proteins )
(see all similar genes ):PRSS44 PRSS8 PRSS33 PRSS42 TPSG1 PRSS27 TMPRSS11D KLK4 TMPRSS13 TPSAB1 CORIN PRSS50 TPSB2 tryptaseC CELA3A ACR DESC1 DKFZp586F0824
PRSS45 for paralogs About GeneDecksing
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Genomic Variantsfor PRSS45 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 3 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for PRSS45 (46783581 - 46854048 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 9 variations for PRSS45 8 CNVs : 91298 91297 79756 7411 36148 79754 3428 36147 1 Indel : 63459
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PRSS45
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Disorders
/ Diseasesfor PRSS45 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
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Publicationsfor PRSS45 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for PRSS45 gene integrated from 9 sources : (articles sorted by number of sources associating them with PRSS45) Utopia : connect your pdf to the dynamic world of online information
Human and mouse proteases: a comparative genomic approach. (PubMed id 12838346) 1 , 2 , 3 Puente X.S.... Lopez-Otin C. (2003) The DNA sequence, annotation and analysis of human chromosome 3. (PubMed id 16641997) 2 Muzny D.M....Gibbs R.A. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 2 Gerhard D.S....Malek J. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002)
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External Searches for PRSS45 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing PRSS45 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing PRSS45 gene
(According to HUGE )
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Specialized Databases showing PRSS45 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for PRSS45 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for PRSS45 gene: Search GeneIP for patents involving PRSS45 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PRSS45 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for PRSS45 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for PRSS45 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PRSS45 OriGene Protein Over-expression Lysate for PRSS45 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for PRSS45 Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRSS45 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRSS45 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for PRSS45 OriGene Custom Protein Services for PRSS45 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PRSS45 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PRSS45 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PRSS45 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat PRSS45 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PRSS45 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PRSS45
Search Tocris compounds for PRSS45
PRSS45 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRSS45
Search ThermoFisher Antibodies for PRSS45
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PRSS45
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Expression for PRSS45
Function for PRSS45
Genomic Views for PRSS45
Intellectual Property for PRSS45
Orthologs for PRSS45
Paralogs for PRSS45
Pathways / Interactions for PRSS45
Products for PRSS45
Proteins for PRSS45
Publications for PRSS45
Search Box for PRSS45
Summaries for PRSS45
Transcripts for PRSS45
Variants for PRSS45
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