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Aliases for PRSS2 Gene

Aliases for PRSS2 Gene

  • Protease, Serine, 2 (Trypsin 2) 2 3
  • Anionic Trypsinogen 3 4
  • EC 3.4.21.4 4 63
  • Trypsin II 3 4
  • TRYP2 3 4
  • TRY2 3 4
  • Protease Serine 2 Preproprotein 3
  • Serine Protease 2 4
  • Trypsinogen 2 3
  • EC 3.4.21 63
  • TRY8 3

External Ids for PRSS2 Gene

Previous GeneCards Identifiers for PRSS2 Gene

  • GC07P140772
  • GC07P140731
  • GC07P141821
  • GC07P141899
  • GC07P141902
  • GC07P141676
  • GC07P141990
  • GC07P142167
  • GC07P142178
  • GC07P142457
  • GC07P142298
  • GC07Pg41870
  • GC07P9T0974
  • GC07P9T0097
  • GC07P142858

Summaries for PRSS2 Gene

Entrez Gene Summary for PRSS2 Gene

  • This gene belongs to the trypsin family of serine proteases and encodes anionic trypsinogen. It is part of a cluster of trypsinogen genes that are located within the T cell receptor beta locus. Enzymes of this family cleave peptide bonds that follow lysine or arginine residues. This protein is found at high levels in pancreatic juice and its upregulation is a characteristic feature of pancreatitis. This protein has also been found to activate pro-urokinase in ovarian tumors, suggesting a function in tumor invasion. In addition, this enzyme is able to cleave across the type II collagen triple helix in rheumatoid arthritis synovitis tissue, potentially participating in the degradation of type II collagen-rich cartilage matrix. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Jan 2015]

GeneCards Summary for PRSS2 Gene

PRSS2 (Protease, Serine, 2 (Trypsin 2)) is a Protein Coding gene. Diseases associated with PRSS2 include linitis plastica and pancreatitis, hereditary. Among its related pathways are Immune System and Degradation of the extracellular matrix. GO annotations related to this gene include calcium ion binding and serine-type endopeptidase activity.

UniProtKB/Swiss-Prot for PRSS2 Gene

  • In the ileum, may be involved in defensin processing, including DEFA5.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PRSS2 Gene

Genomics for PRSS2 Gene

Genomic Location for PRSS2 Gene

Chromosome:
7
Start:
142,748,662 bp from pter
End:
142,774,564 bp from pter
Size:
25,903 bases
Orientation:
Plus strand

Genomic View for PRSS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PRSS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRSS2 Gene

No data available for Regulatory Elements for PRSS2 Gene

Proteins for PRSS2 Gene

  • Protein details for PRSS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P07478-TRY2_HUMAN
    Recommended name:
    Trypsin-2
    Protein Accession:
    P07478

    Protein attributes for PRSS2 Gene

    Size:
    247 amino acids
    Molecular mass:
    26488 Da
    Cofactor:
    Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Note=Binds 1 Ca(2+) ion per subunit.;
    Quaternary structure:
    No Data Available

neXtProt entry for PRSS2 Gene

Proteomics data for PRSS2 Gene at MOPED

Post-translational modifications for PRSS2 Gene

  • Sulfated on tyrosine.
  • Sulfation at Tyr-154 increases selectivity towards basic versus apolar residues at the P2 position of inhibitors that bind in a substrate-like fashion. Although the increase in selectivity is relatively small, it may facilitate digestion of a broader range of dietary proteins.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for PRSS2 Gene

Antibody Products

  • R&D Systems Antibodies for PRSS2 (Trypsin 2/PRSS2)

Domains & Families for PRSS2 Gene

Gene Families for PRSS2 Gene

Suggested Antigen Peptide Sequences for PRSS2 Gene

Graphical View of Domain Structure for InterPro Entry

P07478

UniProtKB/Swiss-Prot:

TRY2_HUMAN :
  • Contains 1 peptidase S1 domain.
  • Belongs to the peptidase S1 family.
Domain:
  • Contains 1 peptidase S1 domain.
Family:
  • Belongs to the peptidase S1 family.
genes like me logo Genes that share domains with PRSS2: view

Function for PRSS2 Gene

Molecular function for PRSS2 Gene

GENATLAS Biochemistry:
protease serine 2,trypsin 2,expressed in pancreas
UniProtKB/Swiss-Prot CatalyticActivity:
Preferential cleavage: Arg- -Xaa, Lys- -Xaa
UniProtKB/Swiss-Prot Function:
In the ileum, may be involved in defensin processing, including DEFA5.

Enzyme Numbers (IUBMB) for PRSS2 Gene

Gene Ontology (GO) - Molecular Function for PRSS2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004252 serine-type endopeptidase activity IDA 12709065
GO:0005509 calcium ion binding IDA 12709065
GO:0005515 protein binding IPI 16192646
genes like me logo Genes that share ontologies with PRSS2: view

Phenotypes for PRSS2 Gene

genes like me logo Genes that share phenotypes with PRSS2: view

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for PRSS2

In Situ Assay Products

Flow Cytometry Products

No data available for Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRSS2 Gene

Localization for PRSS2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for PRSS2 Gene

Secreted, extracellular space.

Gene Ontology (GO) - Cellular Components for PRSS2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005615 extracellular space IMP 16192646
GO:0031012 extracellular matrix TAS 12731883
genes like me logo Genes that share ontologies with PRSS2: view

No data available for Subcellular locations from COMPARTMENTS for PRSS2 Gene

Pathways & Interactions for PRSS2 Gene

genes like me logo Genes that share pathways with PRSS2: view

Interacting Proteins for PRSS2 Gene

Selected Interacting proteins: P07478-TRY2_HUMAN for PRSS2 Gene via I2D

Gene Ontology (GO) - Biological Process for PRSS2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IDA 12731883
GO:0007586 digestion IEA --
GO:0022617 extracellular matrix disassembly TAS --
GO:0030198 extracellular matrix organization TAS --
GO:0030307 positive regulation of cell growth TAS 12731883
genes like me logo Genes that share ontologies with PRSS2: view

No data available for SIGNOR curated interactions for PRSS2 Gene

Drugs & Compounds for PRSS2 Gene

(15) Drugs for PRSS2 Gene - From: DrugBank, DGIdb, ApexBio, HMDB, and NovoSeek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Aprotinin Approved, Withdrawn Pharma Inhibitor of bovine pancreatic trypsin 24
Benzydamine Experimental Pharma Target 7
3-Phenylpropylamine Experimental Pharma Target 0
benzamidine Experimental Pharma Target 0
Monoisopropylphosphorylserine Experimental Pharma Target 0

(2) Additional Compounds for PRSS2 Gene - From: NovoSeek and HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
Isopropyl alcohol
  • 2-Propanol
  • 2-Propyl alcohol
  • Alcojel
  • Alkolave
  • Avantin
67-63-0
Trypsinogen
genes like me logo Genes that share compounds with PRSS2: view

Transcripts for PRSS2 Gene

mRNA/cDNA for PRSS2 Gene

(2) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for PRSS2 Gene

Protease, serine, 2 (trypsin 2):
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for PRSS2

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for PRSS2 Gene

No ASD Table

Relevant External Links for PRSS2 Gene

GeneLoc Exon Structure for
PRSS2
ECgene alternative splicing isoforms for
PRSS2

Expression for PRSS2 Gene

mRNA expression in normal human tissues for PRSS2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for PRSS2 Gene

This gene is overexpressed in Pancreatic juice (47.9) and Pancreas (14.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for PRSS2 Gene



SOURCE GeneReport for Unigene cluster for PRSS2 Gene Hs.726742

mRNA Expression by UniProt/SwissProt for PRSS2 Gene

P07478-TRY2_HUMAN
Tissue specificity: Expressed in Paneth cells, at the base of small intestinal crypts.
genes like me logo Genes that share expression patterns with PRSS2: view

Protein tissue co-expression partners for PRSS2 Gene

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for PRSS2 Gene

Orthologs for PRSS2 Gene

This gene was present in the common ancestor of animals.

Orthologs for PRSS2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia PRSS2 35
  • 84.08 (n)
  • 78.95 (a)
dog
(Canis familiaris)
Mammalia LOC100686744 35
  • 85.43 (n)
  • 81.78 (a)
mouse
(Mus musculus)
Mammalia Prss2 35
  • 81.03 (n)
  • 77.24 (a)
Prss2 16
chimpanzee
(Pan troglodytes)
Mammalia LOC100615529 35
  • 96.71 (n)
  • 95.88 (a)
rat
(Rattus norvegicus)
Mammalia Prss1 35
  • 81.44 (n)
  • 76.42 (a)
chicken
(Gallus gallus)
Aves PRSS2 35
  • 70.85 (n)
  • 71.3 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.8261 35
try10 35
  • 68.59 (n)
  • 67.9 (a)
zebrafish
(Danio rerio)
Actinopterygii si:ch73-103b2.3 35
  • 69.06 (n)
  • 66.37 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.8654 35
fruit fly
(Drosophila melanogaster)
Insecta CG10472 37
  • 34 (a)
CG16998 37
  • 35 (a)
CG17239 37
  • 37 (a)
CG17571 37
  • 37 (a)
CG18065 37
  • 37 (a)
CG18735 37
  • 42 (a)
CG4386 37
  • 42 (a)
CG5197 37
  • 37 (a)
CG6041 37
  • 37 (a)
CG7829 37
  • 34 (a)
CG8299 37
  • 38 (a)
CG9294 37
  • 37 (a)
eegrTry 37
  • 35 (a)
egrTry 37
  • 38 (a)
kgrTry 37
  • 33 (a)
lgrTry 37
  • 37 (a)
Try29F 37
  • 43 (a)
zgrTry 37
  • 36 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009966 35
  • 51.73 (n)
  • 44.81 (a)
Species with no ortholog for PRSS2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for PRSS2 Gene

ENSEMBL:
Gene Tree for PRSS2 (if available)
TreeFam:
Gene Tree for PRSS2 (if available)

Paralogs for PRSS2 Gene

genes like me logo Genes that share paralogs with PRSS2: view

No data available for Paralogs for PRSS2 Gene

Variants for PRSS2 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for PRSS2 Gene

P07478-TRY2_HUMAN
His-153 variation is a common polymorphism in African populations with a minor allele frequency of 9.2%, it eliminates sulfation at Tyr-154, with no consequences on digestive physiology.

Sequence variations from dbSNP and Humsavar for PRSS2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs13583 -- 142,773,335(+) AATGC(A/G)GCCAA synonymous-codon, reference, nc-transcript-variant
rs1804564 -- 142,773,921(+) CAGCC(C/G)ACTAC missense, reference, nc-transcript-variant
rs1811092 -- 142,771,398(+) CCAGA(C/G)ACTCA intron-variant
rs2002549 -- 142,771,378(+) GGAGG(C/T)TGAAA intron-variant
rs2075544 -- 142,773,135(+) CATGC(A/G)ATATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for PRSS2 Gene

Variant ID Type Subtype PubMed ID
nsv831166 CNV Gain+Loss 17160897
nsv428187 CNV Loss 18775914
dgv2145e1 CNV Complex 17122850
dgv841n27 CNV Loss 19166990
essv19150 CNV CNV 17122850
nsv824336 CNV Loss 20364138
esv34617 CNV Loss 17911159
nsv818563 CNV Loss 17921354
nsv831167 CNV Gain+Loss 17160897
nsv889274 CNV Loss 21882294
dgv1167e201 CNV Deletion 23290073
esv2740741 CNV Deletion 23290073
dgv1169e201 CNV Deletion 23290073
dgv1170e201 CNV Deletion 23290073
dgv1244e199 CNV Deletion 23128226
nsv442207 CNV CNV 18776908
esv2421493 CNV Deletion 20811451

Relevant External Links for PRSS2 Gene

HapMap Linkage Disequilibrium report
PRSS2
Human Gene Mutation Database (HGMD)
PRSS2

No data available for Variation tolerance for PRSS2 Gene

Disorders for PRSS2 Gene

MalaCards: The human disease database

(6) MalaCards diseases for PRSS2 Gene - From: OMIM, Orphanet, NovoSeek, and GeneCards

Disorder Aliases PubMed IDs
linitis plastica
  • leather-bottle stomach
pancreatitis, hereditary
  • pancreatitis, chronic
tropical calcific pancreatitis
  • fibrocalculous pancreatic diabetes
prss1-related hereditary pancreatitis
pancreatitis
- elite association
Search PRSS2 in MalaCards View complete list of genes associated with diseases

Relevant External Links for PRSS2

Genetic Association Database (GAD)
PRSS2
Human Genome Epidemiology (HuGE) Navigator
PRSS2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
PRSS2
genes like me logo Genes that share disorders with PRSS2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for PRSS2 Gene

Publications for PRSS2 Gene

  1. Identification of pancreatic juice proteins as biomarkers of pancreatic cancer. (PMID: 20428826) Gao J. … Ma L. (Oncol. Rep. 2010) 23 67
  2. Identification of novel peptide inhibitors for human trypsins. (PMID: 20128688) Wu P. … Koistinen H. (Biol. Chem. 2010) 23 67
  3. Analysis of the urine proteome of human contrast-induced kidney injury using two-dimensional fluorescence differential gel electrophoresis/matrix-assisted laser desorption time-of-flight mass spectrometry/liquid chromatography mass spectrometry. (PMID: 19887787) Wang L. … Jia M. (Am. J. Nephrol. 2010) 23 67
  4. Polymorphic receptors of the innate immune system (MBL/MASP-2 and TLR2/4) and susceptibility to pneumococcal bacteremia in HIV-infected patients: a case-control study. (PMID: 19275590) Horcajada J.P. … Gatell J.M. (Curr. HIV Res. 2009) 23 67
  5. Prognosis in pediatric hematologic malignancies is associated with serum concentration of mannose-binding lectin-associated serine protease-2 (MASP-2). (PMID: 19343776) Zehnder A. … Ammann R.A. (Pediatr Blood Cancer 2009) 23 67

Products for PRSS2 Gene

Sources for PRSS2 Gene

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