Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PRRG1 Gene

Aliases for PRRG1 Gene

  • Proline Rich Gla (G-Carboxyglutamic Acid) 1 2 3
  • Proline-Rich Gla (G-Carboxyglutamic Acid) Polypeptide 1 2 3
  • PRGP1 3 4
  • Transmembrane Gamma-Carboxyglutamic Acid Protein 1 3
  • Proline-Rich Gamma-Carboxyglutamic Acid Protein 1 4
  • Proline-Rich Gla Protein 1 4
  • TMG1 4

External Ids for PRRG1 Gene

Previous GeneCards Identifiers for PRRG1 Gene

  • GC0XP035313
  • GC0XP035496
  • GC0XP036053
  • GC0XP036239
  • GC0XP036964
  • GC0XP037093
  • GC0XP037209
  • GC0XP034955

Summaries for PRRG1 Gene

Entrez Gene Summary for PRRG1 Gene

  • This gene encodes a vitamin K-dependent, gamma-carboxyglutamic acid (Gla)-containing, single-pass transmembrane protein. This protein contains a Gla domain at the N-terminus, preceded by a propeptide sequence required for post-translational gamma-carboxylation of specific glutamic acid residues by a vitamin K-dependent gamma-carboxylase. The C-terminus is proline-rich containing PPXY and PXXP motifs found in a variety of signaling and cytoskeletal proteins. This gene is highly expressed in the spinal cord. Several alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Mar 2010]

GeneCards Summary for PRRG1 Gene

PRRG1 (Proline Rich Gla (G-Carboxyglutamic Acid) 1) is a Protein Coding gene. GO annotations related to this gene include calcium ion binding. An important paralog of this gene is PRRG4.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PRRG1 Gene

Genomics for PRRG1 Gene

Regulatory Elements for PRRG1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for PRRG1 Gene

Start:
37,349,275 bp from pter
End:
37,457,295 bp from pter
Size:
108,021 bases
Orientation:
Plus strand

Genomic View for PRRG1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PRRG1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRRG1 Gene

Proteins for PRRG1 Gene

  • Protein details for PRRG1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O14668-TMG1_HUMAN
    Recommended name:
    Transmembrane gamma-carboxyglutamic acid protein 1
    Protein Accession:
    O14668
    Secondary Accessions:
    • B2R7A3
    • C9JXL7
    • D3DWA9
    • Q5JT66

    Protein attributes for PRRG1 Gene

    Size:
    218 amino acids
    Molecular mass:
    24947 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for PRRG1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for PRRG1 Gene

Proteomics data for PRRG1 Gene at MOPED

Post-translational modifications for PRRG1 Gene

  • Gla residues are produced after subsequent post-translational modifications of glutamate by a vitamin K-dependent gamma-carboxylase
  • Ubiquitination at Lys10 and Lys66
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for PRRG1 Gene

Domains for PRRG1 Gene

Suggested Antigen Peptide Sequences for PRRG1 Gene

Graphical View of Domain Structure for InterPro Entry

O14668

UniProtKB/Swiss-Prot:

TMG1_HUMAN :
  • O14668
Domain:
  • Contains 1 Gla (gamma-carboxy-glutamate) domain.
genes like me logo Genes that share domains with PRRG1: view

No data available for Gene Families for PRRG1 Gene

Function for PRRG1 Gene

Gene Ontology (GO) - Molecular Function for PRRG1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005509 calcium ion binding IEA --
genes like me logo Genes that share ontologies with PRRG1: view

Animal Model Products

CRISPR Products

miRNA for PRRG1 Gene

miRTarBase miRNAs that target PRRG1

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for PRRG1

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for PRRG1 Gene

Localization for PRRG1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for PRRG1 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for PRRG1 Gene COMPARTMENTS Subcellular localization image for PRRG1 gene
Compartment Confidence
plasma membrane 4
extracellular 2
cytosol 1
mitochondrion 1
nucleus 1

Gene Ontology (GO) - Cellular Components for PRRG1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
GO:0005887 integral component of plasma membrane TAS 9256434
genes like me logo Genes that share ontologies with PRRG1: view

Pathways for PRRG1 Gene

SuperPathways for PRRG1 Gene

No Data Available

Interacting Proteins for PRRG1 Gene

Gene Ontology (GO) - Biological Process for PRRG1 Gene

None

No data available for Pathways by source for PRRG1 Gene

Transcripts for PRRG1 Gene

Unigene Clusters for PRRG1 Gene

Proline rich Gla (G-carboxyglutamic acid) 1:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for PRRG1

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for PRRG1 Gene

No ASD Table

Relevant External Links for PRRG1 Gene

GeneLoc Exon Structure for
PRRG1
ECgene alternative splicing isoforms for
PRRG1

Expression for PRRG1 Gene

mRNA expression in normal human tissues for PRRG1 Gene

mRNA differential expression in normal tissues according to GTEx for PRRG1 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (7.5) and Brain - Substantia nigra (4.3).

SOURCE GeneReport for Unigene cluster for PRRG1 Gene Hs.190341

mRNA Expression by UniProt/SwissProt for PRRG1 Gene

O14668-TMG1_HUMAN
Tissue specificity: Highly expressed in the spinal cord
genes like me logo Genes that share expressions with PRRG1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and Protein expression for PRRG1 Gene

Orthologs for PRRG1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for PRRG1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia PRRG1 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia PRRG1 35
  • 89.91 (n)
  • 93.58 (a)
PRRG1 36
  • 77 (a)
OneToOne
dog
(Canis familiaris)
Mammalia LOC491821 35
  • 92.81 (n)
  • 94.95 (a)
PRRG1 36
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Prrg1 35
  • 90.37 (n)
  • 92.66 (a)
Prrg1 16
Prrg1 36
  • 93 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia PRRG1 36
  • 72 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia PRRG1 36
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Prrg1 35
  • 89.04 (n)
  • 93.98 (a)
chicken
(Gallus gallus)
Aves PRRG1 35
  • 70.37 (n)
  • 63.89 (a)
PRRG1 36
  • 60 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia PRRG1 36
  • 56 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia LOC398382 35
tropical clawed frog
(Silurana tropicalis)
Amphibia prrg1 35
  • 64.38 (n)
  • 58.82 (a)
Str.6489 35
zebrafish
(Danio rerio)
Actinopterygii PRRG1 36
  • 38 (a)
OneToOne
zgc:103657 35
  • 47.38 (n)
  • 41.12 (a)
Species with no ortholog for PRRG1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for PRRG1 Gene

ENSEMBL:
Gene Tree for PRRG1 (if available)
TreeFam:
Gene Tree for PRRG1 (if available)

Paralogs for PRRG1 Gene

Paralogs for PRRG1 Gene

Selected SIMAP similar genes for PRRG1 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with PRRG1: view

Variants for PRRG1 Gene

Sequence variations from dbSNP and Humsavar for PRRG1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs13942 -- 37,456,917(+) CTGCA(C/T)GTGCA utr-variant-3-prime
rs1064711 -- 37,432,110(+) tgaga(C/T)ggagt intron-variant
rs1338152 -- 37,430,399(+) CAATT(C/G)CAATC intron-variant
rs1415940 -- 37,416,750(+) AGTTT(A/G)CATAA intron-variant
rs1415941 -- 37,416,956(+) TGTAT(G/T)CTCTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for PRRG1 Gene

Variant ID Type Subtype PubMed ID
nsv6863 CNV Insertion 18451855

Relevant External Links for PRRG1 Gene

HapMap Linkage Disequilibrium report
PRRG1
Locus Specific Mutation Databases (LSDB)
PRRG1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for PRRG1 Gene

Disorders for PRRG1 Gene

No disorders were found for PRRG1 Gene.

No data available for UniProtKB/Swiss-Prot for PRRG1 Gene

Publications for PRRG1 Gene

  1. Primary structure and tissue distribution of two novel proline-rich gamma-carboxyglutamic acid proteins. (PMID: 9256434) Kulman J.D. … Davie E.W. (Proc. Natl. Acad. Sci. U.S.A. 1997) 2 3 4 23
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang A.G. … Kim N.S. (Biochem. Biophys. Res. Commun. 2006) 3

Products for PRRG1 Gene

Sources for PRRG1 Gene

Back to Top

Content