PRR5L Gene
protein-coding GIFtS : 48
GCID: GC11 P036355
proline rich 5 like
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Aliasesfor PRR5L gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Proline Rich 5 Like 1 2 PROTOR-21 PROTOR22 3 5 Proline-Rich Protein 5-Like2 Protein Observed With Rictor-22 3 Protor-23 FLJ142131 5 Protor-23
Export aliases for PRR5L gene to outside databases Previous GC identifer: GC11P036017
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Summariesfor PRR5L gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: PRR5L_HUMAN, Q6MZQ0 Function : May be part of the TORC2 complex which plays a critical role in AKT1 'Ser-473' phosphorylation, and maymodulate the phosphorylation of PKCA and regulate actin cytoskeleton organization
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Genomic Viewsfor PRR5L gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000011.9 NC_018922.1 NT_009237.18 Regulatory elements: Search SABiosciences Regulatory transcription factor binding sites for PRR5L Other transcription factors Search SABiosciences Chromatin IP Primers for PRR5L Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PRR5L
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 11p13-p12 Ensembl cytogenetic band: 11p13 HGNC cytogenetic band: 11p13-p12 PRR5L Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11P036355: view genomic region
(about GC identifiers )
Start:
36,317,725 bp from pter
End:
36,486,754 bp from pter
Size:
169,030 bases
Orientation:
plus strand
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Proteinsfor PRR5L gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: PRR5L_HUMAN, Q6MZQ0 (See
protein sequence )Recommended Name: Proline-rich protein 5-like Size : 368 amino acids; 40836 Da
Subunit : May replace PRR5 in the mammalian target of rapamycin complex 2 (mTORC2) which contains MTOR, MLST8, PRR5,RICTOR, MAPKAP1 and DEPTOR
Sequence caution : Sequence=AAI25123.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Secondary accessions : A4QN22 E9PKY1 Q96H46 Q9H7V4Alternative splicing : 4 isoforms : Q6MZQ0-1 Q6MZQ0-2 Q6MZQ0-3 Q6MZQ0-4 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for PRR5L: NX_Q6MZQ0 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q6MZQ0 PRR5L Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (4 alternative transcripts):
NP_001153639.1 NP_001153640.1 NP_001153641.1 NP_079117.3 ENSEMBL proteins: ENSP00000435050 ENSP00000433708 ENSP00000433893 ENSP00000431610 ENSP00000368144 ENSP00000433305 ENSP00000436485 ENSP00000431475 ENSP00000432203 ENSP00000436402 ENSP00000435241 ENSP00000310103 Human Recombinant Protein Products: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005739 mitochondrion
IEA --
PRR5L for ontologies About GeneDecksing PRR5L Antibody Products: Assay Products for PRR5L:
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Protein
Domains / Familiesfor PRR5L gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PRR5L for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q6MZQ0 ProtoNet protein and cluster: Q6MZQ0
UniProtKB/Swiss-Prot: PRR5L_HUMAN, Q6MZQ0 Similarity : Belongs to the PROTOR family
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Functionfor PRR5L gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: PRR5L_HUMAN, Q6MZQ0 Function : May be part of the TORC2 complex which plays a critical role in AKT1 'Ser-473' phosphorylation, and maymodulate the phosphorylation of PKCA and regulate actin cytoskeleton organization
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRR5L (see all 7 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRR5L (see all 4 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 4 ): PRR5L (NM_024841 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PRR5L Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat PRR5L
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRR5L
2 GenomeRNAi human phenotypes for PRR5L :
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Pathways & Interactionsfor PRR5L gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 PI3K / Akt Signaling 2 mTOR signalling
Pathway sources See GeneCards unified pathways Show all pathways 1
Cell Signaling Technology (CST) Pathway for PRR5L 1 BioSystems Pathway for PRR5L
PRR5L for pathways About GeneDecksing Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for PRR5L 4 Interacting proteins for PRR5L (Q6MZQ0 3 ) via UniProtKB, MINT, STRING, and/or I2D About this table
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Drugs & Compoundsfor PRR5L gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for PRR5L Search CenterWatch for drugs/clinical trials and news about PRR5L
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Transcriptsfor PRR5L gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for PRR5L gene (4 alternative transcripts): NM_001160167.1 NM_001160168.1 NM_001160169.1 NM_024841.4 Unigene Cluster for PRR5L:
Proline rich 5 like Hs.19987 [show with all ESTs ] Unigene Representative Sequence: NM_001160167 18/21 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 21 ): ENST00000531269 ENST00000529034 ENST00000530639 ENST00000527172 ENST00000532121 ENST00000526728 ENST00000378867 (uc001mwo.4 uc001mwp.3 uc010rfc.2 )ENST00000389693 ENST00000524380 ENST00000526682 ENST00000532843 ENST00000527751 ENST00000530252 ENST00000532578 ENST00000530050 ENST00000526679 ENST00000527487 ENST00000525672 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRR5L (see all 7 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRR5L (see all 4 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 4 ): PRR5L (NM_024841 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PRR5L Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat PRR5L
Additional cDNA sequence: AK024275.1 AK055042.1 BC008922.2 BC125122.1 BX640959.1
20 DOTS entries : DT.97795024 DT.91680631
DT.120719849 DT.308171 DT.120719944 DT.100739788 DT.91676606 DT.92414829 DT.120719860 DT.120719999 DT.95168337 DT.120720029 DT.97813477 DT.102825199 DT.120719880 DT.120720010 DT.91884244 DT.95074932 DT.40220837 DT.92052689 24/62 AceView cDNA sequences (see all 62 ):
AU131980 T39395 AI811432 BX479617 BM824457 AI924247 BC008922 BI602384 BE744094 AW473414 BG122846 AI732355 AK055042 AA573376 BM765128 BG117238 BQ927099 BI822067 T40553 BG545687 BX956829 BM798151 BQ951066 AK024275 GeneLoc Exon Structure
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Expression for PRR5L gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section PRR5L expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CTTTCCTATG
About this image PRR5L expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Kidney Renal Vesicle Kidney Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
Stem Cell Differentiation: 2 LifeMap Cells Name Category PureStem™ mesenchymal progenitor SM30 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage PureStem™ progenitor EN27 (Embryonic Progenitor Cell)
See PRR5L Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PRR5L SOURCE GeneReport for Unigene cluster: Hs.19987 SABiosciences Custom PCR Arrays for PRR5L Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PRR5LBrowse OriGene validated miRNA SYBR primer pairs Search SABiosciences RT2 qPCR
Primer Assays in human, mouse, rat PRR5L QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PRR5L QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PRR5L In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRR5L
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Orthologsfor PRR5L gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for PRR5L gene from 3/13 species (see all 13 ) About this table
ENSEMBL Gene Tree for PRR5L (if available)TreeFam Gene Tree for PRR5L (if available)
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Paralogsfor PRR5L gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for PRR5L gene PRR5 2 1 SIMAP similar gene for PRR5L using alignment to 10 protein entries: PRR5L_HUMAN (see all proteins ):PRR5
PRR5L for paralogs About GeneDecksing
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Genomic Variantsfor PRR5L gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 11 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for PRR5L (36317725 - 36486754 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 21 variations for PRR5L 14 CNVs : 75597 85724 75602 75603 75600 75595 75596 75601 5274 75599 71309 85723 85722 75598 5 Indels : 11049 11048 101183 11050 60043 2 Inversions : 43708 59692
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PRR5L
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Disorders
/ Diseasesfor PRR5L gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
PRR5L for disorders About GeneDecksing
OMIM gene information: 611728
OMIM disorders : --1 disease for PRR5L : About MalaCards tuberous sclerosis Human Genome Epidemiology (HuGE) Navigator: PRR5L (1 document)Export disorders for PRR5L gene to outside databases
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Publicationsfor PRR5L gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for PRR5L gene integrated from 9 sources : (articles sorted by number of sources associating them with PRR5L) Utopia : connect your pdf to the dynamic world of online information
Identification of Protor as a novel Rictor-binding component of mTOR complex-2. (PubMed id 17461779) 1 , 2 , 3 Pearce L.R.... Alessi D.R. (2007) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) Protor-2 interacts with tristetraprolin to regulate mR NA stability during stress. (PubMed id 21964062) 1 Holmes B....Gera J. (2012) Genetic variants in nuclear-encoded mitochondrial gen es influence AIDS progression. (PubMed id 20877624) 1 Hendrickson S.L....O'Brien S.J. (2010) The full-ORF clone resource of the German cDNA consortium. (PubMed id 17974005) 2 Bechtel S.... Schupp I. (2007) Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560) 1 Kimura K.... Sugano S. (2006) Human chromosome 11 DNA sequence and analysis including novel gene identification. (PubMed id 16554811) 2 Taylor T.D....Sakaki Y. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 2 Gerhard D.S....Malek J. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002)
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External Searches for PRR5L gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing PRR5L gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing PRR5L gene
(According to HUGE )
About This Section --
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Specialized Databases showing PRR5L gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for PRR5L Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for PRR5L gene: Search GeneIP for patents involving PRR5L GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PRR5L gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for PRR5L OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for PRR5L OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PRR5L OriGene Protein Over-expression Lysate for PRR5L Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for PRR5L OriGene 3'-UTR Clone for PRR5L OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRR5L OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRR5L Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for PRR5L OriGene Custom Protein Services for PRR5L OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PRR5L QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PRR5L QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PRR5L QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat PRR5L QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PRR5L QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PRR5L
Antibodies & Assays for PRR5L   (PROTOR2)
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PRR5L Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRR5L
ThermoFisher Antibodies for PRR5L
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat PRR5L
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Function for PRR5L
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