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Aliases for PRR33 Gene

Aliases for PRR33 Gene

  • Proline Rich 33 2 3
  • C11orf89 3 4
  • Chromosome 11 Open Reading Frame 89 2

External Ids for PRR33 Gene

Previous HGNC Symbols for PRR33 Gene

  • C11orf89

Summaries for PRR33 Gene

GeneCards Summary for PRR33 Gene

PRR33 (Proline Rich 33) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PRR33 Gene

Genomics for PRR33 Gene

Genomic Location for PRR33 Gene

Start:
1,887,586 bp from pter
End:
1,917,665 bp from pter
Size:
30,080 bases
Orientation:
Minus strand

Genomic View for PRR33 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PRR33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRR33 Gene

No data available for Regulatory Elements for PRR33 Gene

Proteins for PRR33 Gene

  • Protein details for PRR33 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MZF0-PRR33_HUMAN
    Recommended name:
    Proline-rich protein 33
    Protein Accession:
    A8MZF0
    Secondary Accessions:
    • A6NI49

    Protein attributes for PRR33 Gene

    Size:
    331 amino acids
    Molecular mass:
    35187 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PRR33 Gene

Proteomics data for PRR33 Gene at MOPED

Post-translational modifications for PRR33 Gene

No Post-translational modifications

Other Protein References for PRR33 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for PRR33 Gene

Domains for PRR33 Gene

Protein Domains for PRR33 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PRR33: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PRR33 Gene

Function for PRR33 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for PRR33 Gene

Localization for PRR33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PRR33 Gene

Pathways for PRR33 Gene

SuperPathways for PRR33 Gene

No Data Available

Interacting Proteins for PRR33 Gene

Gene Ontology (GO) - Biological Process for PRR33 Gene

None

No data available for Pathways by source for PRR33 Gene

Transcripts for PRR33 Gene

mRNA/cDNA for PRR33 Gene

(3) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PRR33 Gene

No ASD Table

Relevant External Links for PRR33 Gene

GeneLoc Exon Structure for
PRR33
ECgene alternative splicing isoforms for
PRR33

Expression for PRR33 Gene

mRNA expression in normal human tissues for PRR33 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for PRR33 Gene

genes like me logo Genes that share expressions with PRR33: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for PRR33 Gene

Orthologs for PRR33 Gene

This gene was present in the common ancestor of chordates.

Orthologs for PRR33 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11orf89 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia LOC789200 35
  • 73.59 (n)
  • 65.15 (a)
dog
(Canis familiaris)
Mammalia C11orf89 36
  • 63 (a)
OneToOne
LOC102153419 35
  • 74.86 (n)
  • 65.45 (a)
mouse
(Mus musculus)
Mammalia Gm14492 36
  • 61 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC685580 35
  • 71.94 (n)
  • 64.22 (a)
chicken
(Gallus gallus)
Aves C11orf89 36
  • 26 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii C11orf89 36
  • 14 (a)
OneToOne
Species with no ortholog for PRR33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for PRR33 Gene

ENSEMBL:
Gene Tree for PRR33 (if available)
TreeFam:
Gene Tree for PRR33 (if available)

Paralogs for PRR33 Gene

No data available for Paralogs for PRR33 Gene

Variants for PRR33 Gene

Sequence variations from dbSNP and Humsavar for PRR33 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs576603 -- 1,892,909(+) ATGAG(C/T)GAGTG intron-variant
rs810021 -- 1,893,589(+) atgga(A/G)ggagg intron-variant
rs1092608 -- 1,893,629(+) gtgga(G/T)ggatg intron-variant
rs4980382 -- 1,916,135(+) TGTGT(C/G)AAACA intron-variant
rs7107428 -- 1,915,290(-) GAGAA(C/T)AACAT intron-variant

Relevant External Links for PRR33 Gene

HapMap Linkage Disequilibrium report
PRR33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for PRR33 Gene

Disorders for PRR33 Gene

No disorders were found for PRR33 Gene.

No data available for UniProtKB/Swiss-Prot for PRR33 Gene

Publications for PRR33 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 3 4
  2. Genome-wide association study identifies novel breast cancer susceptibility loci. (PMID: 17529967) Easton D.F. … Ponder B.A. (Nature 2007) 3
  3. Large-scale genotyping identifies 41 new loci associated with breast cancer risk. (PMID: 23535729) Michailidou K. … Easton D.F. (Nat. Genet. 2013) 3

Products for PRR33 Gene

Sources for PRR33 Gene

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