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Aliases for PROSER3 Gene

Aliases for PROSER3 Gene

  • Proline And Serine Rich 3 2 3
  • C19orf55 3 4
  • Chromosome 19 Open Reading Frame 55 2
  • Proline And Serine-Rich Protein 3 3

External Ids for PROSER3 Gene

Previous Symbols for PROSER3 Gene

  • C19orf55

Summaries for PROSER3 Gene

GeneCards Summary for PROSER3 Gene

PROSER3 (Proline And Serine Rich 3) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PROSER3 Gene

Genomics for PROSER3 Gene

Genomic Location for PROSER3 Gene

Start:
35,758,143 bp from pter
End:
35,771,028 bp from pter
Size:
12,886 bases
Orientation:
Plus strand

Genomic View for PROSER3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PROSER3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PROSER3 Gene

No data available for Regulatory Elements for PROSER3 Gene

Proteins for PROSER3 Gene

  • Protein details for PROSER3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q2NL68-PRSR3_HUMAN
    Recommended name:
    Proline and serine-rich protein 3
    Protein Accession:
    Q2NL68
    Secondary Accessions:
    • Q8NDI3
    • Q8WWC8
    • Q96NL4

    Protein attributes for PROSER3 Gene

    Size:
    480 amino acids
    Molecular mass:
    51075 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH17947.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

    Alternative splice isoforms for PROSER3 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for PROSER3 Gene

Proteomics data for PROSER3 Gene at MOPED

Post-translational modifications for PROSER3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for PROSER3 Gene

Domains for PROSER3 Gene

Protein Domains for PROSER3 Gene

ProtoNet:
genes like me logo Genes that share domains with PROSER3: view

No data available for Gene Families and UniProtKB/Swiss-Prot for PROSER3 Gene

Function for PROSER3 Gene

miRNA for PROSER3 Gene

miRTarBase miRNAs that target PROSER3

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for PROSER3 Gene

Localization for PROSER3 Gene

No data available for Gene Ontology (GO) - Cellular Components for PROSER3 Gene

Pathways for PROSER3 Gene

SuperPathways for PROSER3 Gene

No Data Available

Interacting Proteins for PROSER3 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000380116%0d%0a9606.ENSP00000385269%0d%0a
Selected Interacting proteins: ENSP00000380116 for PROSER3 Gene via STRING

Symbol External ID(s) Details
ELAVL1

Gene Ontology (GO) - Biological Process for PROSER3 Gene

None

No data available for Pathways by source for PROSER3 Gene

Transcripts for PROSER3 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PROSER3 Gene

No ASD Table

Relevant External Links for PROSER3 Gene

GeneLoc Exon Structure for
PROSER3
ECgene alternative splicing isoforms for
PROSER3

Expression for PROSER3 Gene

mRNA expression in normal human tissues for PROSER3 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for PROSER3 Gene

genes like me logo Genes that share expressions with PROSER3: view

Orthologs for PROSER3 Gene

This gene was present in the common ancestor of chordates.

Orthologs for PROSER3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C19orf55 37
  • 83 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C18H19orf55 36
  • 78.73 (n)
  • 69.52 (a)
C19orf55 37
  • 38 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C19orf55 37
  • 46 (a)
OneToOne
C1H19orf55 36
  • 83.46 (n)
  • 78.88 (a)
mouse
(Mus musculus)
Mammalia BC053749 16
BC053749 37
  • 34 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C19orf55 37
  • 31 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii C15H19orf55 37
  • 17 (a)
OneToOne
Species with no ortholog for PROSER3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for PROSER3 Gene

ENSEMBL:
Gene Tree for PROSER3 (if available)
TreeFam:
Gene Tree for PROSER3 (if available)

Paralogs for PROSER3 Gene

No data available for Paralogs for PROSER3 Gene

Variants for PROSER3 Gene

Sequence variations from dbSNP and Humsavar for PROSER3 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs107878 -- 35,759,358(+) AACCC(C/T)ACTTT intron-variant
rs179570 -- 35,760,425(+) aggcc(A/G)gacgt intron-variant
rs231214 -- 35,769,209(-) atggt(A/G)atgag downstream-variant-500B
rs231215 -- 35,768,744(-) TATAA(C/T)CAGAA utr-variant-3-prime
rs231216 -- 35,768,592(-) TGTAT(G/T)AAAAA utr-variant-3-prime

Relevant External Links for PROSER3 Gene

HapMap Linkage Disequilibrium report
PROSER3

No data available for Structural Variations from Database of Genomic Variants (DGV) for PROSER3 Gene

Disorders for PROSER3 Gene

No disorders were found for PROSER3 Gene.

No data available for UniProtKB/Swiss-Prot for PROSER3 Gene

Publications for PROSER3 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K. … Gorospe M. (EMBO J. 2009) 3
  4. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for PROSER3 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate PROSER3
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for PROSER3
    • Block miRNA regulation of PROSER3 using miScript Target Protectors
    • antibodies-online peptides for PROSER3
    • antibodies-online antibodies for PROSER3
    • antibodies-online kits for PROSER3

    Sources for PROSER3 Gene

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