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Aliases & Descriptions for PROS1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| PROS 2, 3 | | PS21 2 | | PS22 2 | | PS23 2 | | PS24 2 | | PS25 2 | | PSA 2 |
| | | Descriptions |
|---|
| protein S (alpha) 2 | | protein S, alpha 2 | | protein Sa 2 | | vitamin K-dependent plasma protein S 2 |
|
| | Search outside databases for aliases for PROS1 genePrevious GC identifers: GC03P090396 GC03M092806 GC03M090130 GC03M094912 |
Summaries for PROS1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for PROS1: This gene encodes a vitamin K-dependent plasma protein that functions as a cofactor for the anticoagulant protease, activated protein C (APC) to inhibit blood coagulation. It is found in plasma in both a free, functionally active form and also in an inactive form complexed with C4b-binding protein. Mutations in this gene result in autosomal dominant hereditary thrombophilia. An inactive pseudogene of this locus is located at an adjacent region on chromosome 3. [provided by RefSeq] UniProtKB/Swiss-Prot: PROS_HUMAN, P07225Function: Anticoagulant plasma protein; it is a cofactor to activated protein C in the degradation of coagulation factors Va and VIIIa. It helps to prevent coagulation and stimulating fibrinolysisGene Wiki entry for PROS1 (Protein_S) |
Genomic Location for PROS1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the PROS1 gene 
Entrez Gene cytogenetic band: 3q11.2 Ensembl cytogenetic band: 3q11.2 HGNC cytogenetic band: 3p11-q11.2PROS1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure GeneLoc location for GC03M095074:
(about GC identifiers)
Start:
|
95,074,643 bp from pter |
End:
|
95,175,416 bp from pter |
Size:
|
100,774 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000003.10 NT_005612.15
| Proteins for PROS1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PROS_HUMAN, P07225 (See
protein sequence)Recommended Name: Vitamin K-dependent protein S precursor Size: 676 amino acids; 75123 Da
Subcellular location: Secreted
Sequence caution: Sequence=AAP45054.1; Type=Erroneous gene model prediction;
PDB structures from and Proteopedia :1Z6C (3D)
 
Secondary accessions: A8KAC9 Q15518 Q7Z715 Q9UCZ8Post-translational modifications:
The iron and 2-oxoglutarate dependent 3-hydroxylation of aspartate and asparagine is (R) stereospecific within EGF domains (By similarity)1
REFSEQ proteins: NP_000304.2
ENSEMBL proteins: ENSP00000330021 ENSP00000377783 ENSP00000385794
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for PROS1: Assays for PROS1: | Protein
Domains/ Families for PROS1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P07225
ProtoNet protein and cluster: P07225 5/7 Blocks protein families (see all 7
): IPB000152 Aspartic acid and asparagine hydroxylation site IPB000294 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain IPB001791 Laminin G IPB001881 EGF-like calcium-binding IPB002383 Coagulation factor GLA domain signature
UniProtKB/Swiss-Prot: PROS_HUMAN, P07225Similarity: Contains 4 EGF-like domainsSimilarity: Contains 1 Gla (gamma-carboxy-glutamate) domainSimilarity: Contains 2 laminin G-like domains | Gene Function for PROS1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000313
Applied Biosystems Silencer® siRNAs for PROS1
Sigma-Aldrich siRNA and siRNA Panels for PROS1  Sigma-Aldrich shRNA for PROS1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000313                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000313                                  untagged cDNA clones in CMV expression vector (see all 2): NM_000313 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000313
UniProtKB/Swiss-Prot: PROS_HUMAN, P07225Function: Anticoagulant plasma protein; it is a cofactor to activated protein C in the degradation of coagulation factors Va and VIIIa. It helps to prevent coagulation and stimulating fibrinolysisGenatlas biochemistry entry for PROS1:protein S,alpha coagulation factor (cofactor of proC),vitamin K-dependent,ligand for TYRO3,AXL family of receptor tyrosine kinase2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for PROS1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 1 Sigma-Aldrich "Your Favorite Gene" Pathway for PROS1 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for PROS1 
5/52 Interacting proteins for PROS1 (ENSP000003300213) via UniProtKB, MINT, and/or STRING (see all 52
)About this table
1 Gene Ontology (GO) biological process term (links to tree view): About this table
|
Drugs & Compounds for PROS1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for PROS1 10/11 Novoseek chemical compound relationships for PROS1 gene (see all 11
)
About this table
|
Transcripts for PROS1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000313
Sigma-Aldrich siRNA and siRNA Panels for PROS1  Sigma-Aldrich shRNA for PROS1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000313 REFSEQ mRNAs for PROS1 gene: NM_000313.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000313               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000313                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000313                                  untagged cDNA clones in CMV expression vector (see all 2): NM_000313  Additional cDNA sequence: AK292994.1 AK303895.1 BC015801.1 M14338.1 M15036.1 X12892.1 Y00692.1 7 DOTS entries: DT.92431429 DT.40293243 DT.97843414 DT.92431430 DT.120867618 DT.120867637 DT.95072512 24/174 AceView cDNA sequences (see all 174
):AI140233 AW614607 AI056481 AA424875 BU633685 AW772518 H84032 CA390534 BQ004370 AA369126 BU620982 AI088493 N36607 H84031 H79684 BM473027 BU740972 AW772072 CB130160 CA502740 AA009723 CA392161 BM678370 AW950240
highest scoring ESTs for PROS1:M15036 BC015801 BE885958 BG703700 BG704855 BI762925 BM354095 BQ945724 AA009419 AA009723 Unigene Cluster for PROS1: Protein S (alpha) Hs.64016 [show with all ESTs]Unigene Representative Sequence: NM_000313
GeneLoc Exon Structure
3 Ensembl transcripts including schematic representations: ENST00000348974
ENST00000394236
ENST00000407433
|
Expression for PROS1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| PROS1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for PROS1
1 / 2 / 3 3 probe-sets matching PROS1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AACTAGTGTC
SOURCE GeneReport for Unigene cluster: Hs.64016
Expression variation in blood from EXPOLDB for PROS1 UniProtKB/Swiss-Prot: PROS_HUMAN, P07225Tissue specificity: Plasma |
Orthologs for PROS1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for PROS1 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for PROS1
ENSEMBL Gene Tree for PROS1 | Paralogs for PROS1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for PROS1 gene
- SHBG2 GAS62 ENSG000001890022
|
SNPs/Variants for PROS1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for PROS1 (up to first 250kb)
|
Disorders & Mutations for PROS1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 176880 disorders: 612336 UniProtKB/Swiss-Prot: PROS_HUMAN, P07225
Defects in PROS1 are the cause of protein S deficiency (PROS1D) [MIM:612336]; also known as thrombophilia due to protein S deficiency. PROS1D is a cause of hereditary thrombophilia, a hemostatic disorder characterized by impaired regulation of blood coagulation and a tendency to recurrent venous thrombosis. However, many adults with heterozygous disease may be asymptomatic. Based on the plasma levels of total and free PROS1 antigen as well as the serine protease-activated protein C cofactor activity, three types of PROS1D have been described: type I, characterized by reduced total and free PROS1 antigen levels together with reduced anticoagulant activity; type III, in which only free PROS1 antigen and PROS1 activity levels are reduced; and the rare type II which is characterized by normal concentrations of both total and free PROS1 antigen, but low cofactor activity10/24 Novoseek disease relationships for PROS1 gene (see all 24
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| protein s deficiency |
88.43 |
36 |
17938802 (3), 16363235 (3), 18322254 (3), 9657428 (2) (see all 23) |
| prostate cancer |
77.45 |
125 |
12746846 (6), 8694557 (5), 11744475 (4), 15389786 (4) (see all 54) |
| prostate carcinoma |
41.53 |
9 |
11555588 (3), 9105163 (1), 7504042 (1) |
| chronic prostatitis |
38.06 |
6 |
17009527 (3), 15978235 (1) |
| venous thrombosis |
32.72 |
2 |
12529748 (1), 17157360 (1) |
| prostatic adenocarcinoma |
32.00 |
3 |
16829479 (1), 16988533 (1) |
| prostatitis |
31.55 |
1 |
15389786 (1) |
| cancer |
30.52 |
29 |
10628358 (2), 18243505 (2), 18272471 (1), 18678846 (1) (see all 22) |
| thrombosis |
29.98 |
7 |
10706858 (2), 10607700 (1), 11297755 (1), 10790208 (1) (see all 6) |
| deep vein thrombosis |
27.81 |
4 |
17938802 (2), 18954896 (1), 16868938 (1) |
About this table
Genatlas disease: PROS1 thrombosis,recurrent (pro-S deficiency),types I with reduced level of antigen and activity,type II with normal antigen level,reduced activity but excluding most cases of type III Human Gene Mutation Database: PROS1 Genetic Association Database: PROS1 Human Genome Epidemiology Navigator: PROS1 (8 documents)
|
Medical News for PROS1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for PROS1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/332 PubMed articles for PROS1 gene (see all 332
):- Protein S gene analysis reveals the presence of a cosegregating mutation in most pedigrees with type I but not type III PS deficiency. (PubMed id 10447256)1, 3, 4 Espinosa-Parrilla Y.... Sala N. (1999)
- Characterization and structural impact of five novel PROS1 mutations in eleven protein S-deficient families. (PubMed id 11776305)1, 3, 4 Andersen B.D....Thorsen S. (2001)
- Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry. (PubMed id 16335952)3, 4 Liu T.... Smith R.D. (2005)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Four missense mutations identified in the protein S gene of thrombosis patients with protein S deficiency: effects on secretion and anticoagulant activity of protein S. (PubMed id 11927129)3, 4 Tsuda H....Hamasaki N. (2002)
- Genetic and phenotypic variability between families with hereditary protein S deficiency. (PubMed id 11858485)3, 4 Rezende S.M....Simmonds R.E. (2002)
- Protein S Tokushima: abnormal molecule with a substitution of Glu for Lys-155 in the second epidermal growth factor-like domain of protein S. (PubMed id 8298131)3, 4 Hayashi T.... Suzuki K. (1994)
- Protein S and C4b-binding protein: components involved in the regulation of the protein C anticoagulant system. (PubMed id 1833851)2, 3 Dahlback B. (1991)
- Heerlen polymorphism of protein S, an immunologic polymorphism due to dimorphism of residue 460. (PubMed id 2143091)3, 4 Bertina R.M.... Reitsma P.H. (1990)
- Intron-exon organization of the active human protein S gene PS alpha and its pseudogene PS beta: duplication and silencing during primate evolution. (PubMed id 2148111)3, 4 Ploos van Amstel H.K.... Bertina R.M. (1990)
|
Search for PROS1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing PROS1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing PROS1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PROS1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| GeneReviews | http://www.genetests.org/query?gene=PROS1 | | SeattleSNPs | http://pga.gs.washington.edu/data/pros1/ |
|
| | | About This Section
| --
| Services for PROS1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for PROS1:

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Incremental update: 13 Oct 2009
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