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Aliases & Descriptions for PROC
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 3.4.21.69 3 | | PC 2, 5 | | PROC1 2 |
| | | Descriptions |
|---|
| Anticoagulant protein C 3 | | Autoprothrombin IIA 3 | | Blood coagulation factor XIV 3 | | protein C 2 | | protein C (inactivator of coagulation factors Va and VIIIa) 2 |
|
| | Search outside databases for aliases for PROC genePrevious GC identifers: GC02P125475 GC02P126102 GC02P128080 GC02P128269 |
Summaries for PROC(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for PROC: The PROC gene encodes protein C (EC 3.4.21.69), a vitamin K-dependent plasma glycoprotein that is a key component of the anticoagulant system. Protein C is cleaved to its activated form, 'activated protein C' (APC) on endothelial cells by the thrombin-thrombomodulin complex (MIM 176930; MIM 188040) and then acts as a serine protease to degrade the activated forms of coagulation factors V (F5; MIM 612309) and VIII (F8; see MIM 306700). Protein S (PROS1; MIM 176880), also a vitamin K-dependent plasma protein, functions as a cofactor to activated protein C.[supplied by OMIM] UniProtKB/Swiss-Prot: PROC_HUMAN, P04070Function: Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipidsGene Wiki entry for PROC (Protein_C) |
Genomic Location for PROC
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the PROC gene 
Entrez Gene cytogenetic band: 2q13-q14 Ensembl cytogenetic band: 2q14.3 HGNC cytogenetic band: 2q13-q14PROC Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure GeneLoc location for GC02P127892:
(about GC identifiers)
Start:
|
127,892,487 bp from pter |
End:
|
127,903,288 bp from pter |
Size:
|
10,802 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000002.10 NT_022135.15
| Proteins for PROC
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PROC_HUMAN, P04070 (See
protein sequence)Recommended Name: Vitamin K-dependent protein C precursor Size: 461 amino acids; 52071 Da
Subunit: Synthesized as a single chain precursor, which is cleaved into a light chain and a heavy chain held together by a disulfide bond. The enzyme is then activated by thrombin, which cleaves a tetradecapeptide from the amino end of the heavy chain; this reaction, which occurs at the surface of endothelial cells, is strongly promoted by thrombomodulin
Miscellaneous: Calcium also binds, with stronger affinity to another site, beyond the GLA domain. This GLA-independent binding site is necessary for the recognition of the thrombin-thrombomodulin complex
Sequence caution: Sequence=S76088; Type=Erroneous termination; Positions=151; Note=Translated as Cys;
PDB structures from and Proteopedia :1AUT (3D)
 1LQV (3D)
 1PCU (3D)
 2PCT (3D)
 3F6U (3D)
 
Secondary accessions: Q15189 Q15190 Q16001 Q53S74 Q9UC55Post-translational modifications:
The vitamin K-dependent, enzymatic carboxylation of some Glu residues allows the modified protein to bind calcium1
Partial (70%) N-glycosylation of Asn-371 with an atypical N-X-C site produces a higher molecular weight form referred to as alpha. The lower molecular weight form, not glycosylated at Asn-371, is beta1
The iron and 2-oxoglutarate dependent 3-hydroxylation of aspartate and asparagine is (R) stereospecific within EGF domains1
REFSEQ proteins: NP_000303.1
ENSEMBL proteins: ENSP00000234071 ENSP00000386679 ENSP00000384225
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
4 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for PROC: Assays for PROC: | Protein
Domains/ Families for PROC(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P04070
ProtoNet protein and cluster: P04070 5 Blocks protein families: IPB000152 Aspartic acid and asparagine hydroxylation site IPB000294 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain IPB001254 Serine protease IPB001314 Chymotrypsin serine protease family (S1) signature IPB002383 Coagulation factor GLA domain signature
UniProtKB/Swiss-Prot: PROC_HUMAN, P04070Similarity: Belongs to the peptidase S1 familySimilarity: Contains 2 EGF-like domainsSimilarity: Contains 1 Gla (gamma-carboxy-glutamate) domainSimilarity: Contains 1 peptidase S1 domain | Gene Function for PROC
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): BC034377
Applied Biosystems Silencer® siRNAs for PROC
Sigma-Aldrich siRNA and siRNA Panels for PROC  Sigma-Aldrich shRNA Panels and shRNA for PROC  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000312                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000312                                  untagged cDNA clones in CMV expression vector (see all 2): BC034377 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000312
UniProtKB/Swiss-Prot: PROC_HUMAN, P04070Function: Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipidsCatalytic activity: Degradation of blood coagulation factors Va and VIIIaEnzyme Number (IUBMB): EC 3.4.21.69 Genatlas biochemistry entry for PROC:protein C,coagulation factor (FVa and FVIIIa inactivator),vitamin K-dependent12 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Proc):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for PROC
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
2 Sigma-Aldrich "Your Favorite Gene" Pathways for PROC (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for PROC 
5/78 Interacting proteins for PROC (ENSP000002340713 P040701) via UniProtKB, MINT, and/or STRING (see all 78
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for PROC(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for PROC 5 Novoseek chemical compound relationships for PROC gene
About this table
|
Transcripts for PROC(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): BC034377
Sigma-Aldrich siRNA and siRNA Panels for PROC  Sigma-Aldrich shRNA Panels and shRNA for PROC  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000312 REFSEQ mRNAs for PROC gene: NM_000312.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000312               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000312                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000312                                  untagged cDNA clones in CMV expression vector (see all 2): BC034377  Additional cDNA sequence: AK298280.1 AK298449.1 AK298454.1 AK303773.1 BC034377.1 CR606412.1 K02059.1 S50739.1 S72338.1 6 DOTS entries: DT.312382 DT.99954045 DT.99960945 DT.100751492 DT.91756785 DT.91756787 24/34 AceView cDNA sequences (see all 34
):AW052154 BM975043 BC034377 AI671712 CB113383 CR606412 BU607676 BQ646591 BX107014 CB128895 AA745883 AL531077 AL531076 BV199653 BI764225 K02059 R29203 CB145040 BF237847 BI762861 CB145461 NM_000312 AV684946 X02750
highest scoring ESTs for PROC:AA745883 AI021885 AI349475 AL531076 AV656483 AW052154 BC034377 BF237847 BI252272 BI764225 Unigene Cluster for PROC: Protein C (inactivator of coagulation factors Va and VIIIa) Hs.224698 [show with all ESTs]Unigene Representative Sequence: AK298454
GeneLoc Exon Structure
4 Alternative Splicing Database (ASD) splice patterns (SP) for PROC
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | ^ | 6a | · | 6b | ^ | 7a | · | 7b | ^ | 8 | ^ | 9a | · | 9b | |
| SP1: | |   | - |   | |   | |   | |   | - |   | |   | |   | |   | |   | - |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for PROC
3 Ensembl transcripts including schematic representations: ENST00000234071
ENST00000409048
ENST00000402125
|
Expression for PROC
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| PROC expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for PROC
1 / 2 / 3 3 probe-sets matching PROC gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TAACAAGCAC
SOURCE GeneReport for Unigene cluster: Hs.224698
Expression variation in blood from EXPOLDB for PROC UniProtKB/Swiss-Prot: PROC_HUMAN, P04070Tissue specificity: Plasma; synthesized in the liver |
Orthologs for PROC
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for PROC gene from 5/9 species (see all 9
)
About this table Species with no ortholog for PROC
ENSEMBL Gene Tree for PROC | Paralogs for PROC(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for PROC gene
- PROZ2 F22 HPR2
|
SNPs/Variants for PROC(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for PROC (up to first 250kb)
|
Disorders & Mutations for PROC
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 612283 disorders: 176860 612304 UniProtKB/Swiss-Prot: PROC_HUMAN, P04070
Defects in PROC are the cause of protein C deficiency autosomal dominant (ADPROCD) [MIM:176860]. ADPROCD is a cause of hereditary thrombophilia, a hemostatic disorder characterized by impaired regulation of blood coagulation and a tendency to recurrent venous thrombosis. However, many adults with heterozygous disease may be asymptomatic. Individuals with decreased amounts of protein C are classically referred to as having type I protein C deficiency and those with normal amounts of a functionally defective protein as having type II deficiency Defects in PROC are the cause of protein C deficiency autosomal recessive (ARPROCD) [MIM:612304]. ARPROCD results in a thrombotic condition that can manifest as a severe neonatal disorder or as a milder disorder with late-onset thrombophilia. The severe form leads to neonatal death through massive neonatal venous thrombosis. Often associated with ecchymotic skin lesions which can turn necrotic called purpura fulminans, this disorder is very rare10/15 Novoseek disease relationships for PROC gene (see all 15
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| protein c deficiency |
90.95 |
14 |
9788727 (1), 15748260 (1), 8499568 (1), 7881411 (1) (see all 14) |
| purpura fulminans |
73.67 |
5 |
7841323 (2), 9577159 (1), 15748260 (1), 15186640 (1) |
| thrombocytopenia neonatal |
66.57 |
3 |
7841323 (2), 15748260 (1) |
| venous thrombosis |
65.29 |
9 |
8462980 (1), 11264150 (1), 9788727 (1), 1511989 (1) (see all 9) |
| thrombophilia |
63.56 |
2 |
11998221 (1), 12632031 (1) |
| thrombosis |
56.44 |
3 |
10639721 (1), 9817680 (1), 17677000 (1) |
| disseminated intravascular coagulation |
36.08 |
1 |
15186640 (1) |
| thromboembolism |
33.27 |
1 |
11434940 (1) |
| deep vein thrombosis |
31.93 |
2 |
18954896 (1), 16650085 (1) |
| sepsis |
13.25 |
1 |
18691097 (1) |
About this table
Genatlas disease: PROC thrombosis,recurrent (pro-C type I and type II deficiency) Human Gene Mutation Database: PROC Genetic Association Database: PROC Human Genome Epidemiology Navigator: PROC (35 documents)
|
Medical News for PROC(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for PROC (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/301 PubMed articles for PROC gene (see all 301
):- Hereditary thrombophilia: identification of nonsense and missense mutations in the protein C gene. (PubMed id 2437584)2, 3, 4 Romeo G....Peschle C. (1987)
- The nucleotide sequence of the gene for human protein C. (PubMed id 2991887)2, 3, 4 Foster D.C.... Davie E.W. (1985)
- Type I protein C deficiency in French Canadians: evidence of a founder effect and association of specific protein C gene mutations with plasma protein C levels. (PubMed id 9798967)1, 3, 4 Couture P.... Simard J. (1998)
- R147W mutation of PROC gene is common in venous thrombotic patients in Taiwanese Chinese. (PubMed id 15114590)1, 3, 6 Tsay W. and Shen M.C. (2004)
- A homozygous deletion/insertion mutation in the protein C (PROC) gene causing neonatal Purpura fulminans: prenatal diagnosis in an at-risk pregnancy. (PubMed id 7841323)1, 3, 4 Millar D.S.... Cooper D.N. (1994)
- Three novel mutations in the protein C (PROC) gene causing venous thrombosis. (PubMed id 7605880)1, 3, 4 Millar D.S.... Cooper D.N. (1995)
- A Gla domain mutation (Arg 15-->Trp) in the protein C (PROC) gene causing type 2 protein C deficiency and recurrent venous thrombosis. (PubMed id 8499568)1, 3, 4 Millar D.S.... Cooper D.N. (1993)
- A novel homozygous missense mutation in the protein C (PROC) gene causing recurrent venous thrombosis. (PubMed id 1511988)1, 3, 4 Grundy C.B.... Cooper D.N. (1992)
- Two different missense mutations at Arg 178 of the protein C (PROC) gene causing recurrent venous thrombosis. (PubMed id 1511989)1, 3, 4 Grundy C.B.... Cooper D.N. (1992)
- Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry. (PubMed id 16335952)3, 4 Liu T.... Smith R.D. (2005)
|
Search for PROC
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing PROC
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing PROC
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PROC(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for PROC(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
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