PRKCZ Gene
protein-coding GIFtS : 70
GCID: GC01 P001982
protein kinase C, zeta
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Aliasesfor PRKCZ gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Protein Kinase C, Zeta 1 2 PKC-ZETA2 PKC21 2 3 5 Protein Kinase C Zeta Type2 NPKC-Zeta1 EC 2.7.118 EC 2.7.11.133 8
Export aliases for PRKCZ gene to outside databases Previous GC identifers: GC01P001538 GC01P001939 GC01P9M0003 GC01P001260
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Summariesfor PRKCZ gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for PRKCZ : Protein kinase C (PKC) zeta is a member of the PKC family of serine/threonine kinases which are involved in a variety of cellular processes such as proliferation, differentiation and secretion. Unlike the classical PKC isoenzymes which are calcium-dependent, PKC zeta exhibits a kinase activity which is independent of calcium and diacylglycerol but not of phosphatidylserine. Furthermore, it is insensitive to typical PKC inhibitors and cannot be activated by phorbol ester. Unlike the classical PKC isoenzymes, it has only a single zinc finger module. These structural and biochemical properties indicate that the zeta subspecies is related to, but distinct from other isoenzymes of PKC. Alternative splicing results in multiple transcript variants encoding different isoforms. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: KPCZ_HUMAN, Q05513 Function : Calcium- and diacylglycerol-independent serine/threonine-protein kinase that functions inphosphatidylinositol 3-kinase (PI3K) pathway and mitogen-activated protein (MAP) kinase cascade, and is involved in NF-kappa-B activation, mitogenic signaling, cell proliferation, cell polarity, inflammatory response and maintenance of long-term potentiation (LTP). Upon lipopolysaccharide (LPS) treatment in macrophages, or following mitogenic stimuli, functions downstream of PI3K to activate MAP2K1/MEK1-MAPK1/ERK2 signaling cascade independently of RAF1 activation. Required for insulin-dependent activation of AKT3, but may function as an adapter rather than a direct activator. Upon insulin treatment may act as a downstream effector of PI3K and contribute to the activation of translocation of the glucose transporter SLC2A4/GLUT4 and subsequent glucose transport in adipocytes. In EGF-induced cells, binds and activates MAP2K5/MEK5-MAPK7/ERK5 independently of its kinase activity and can activate JUN promoter through MEF2C. Through binding with SQSTM1/p62, functions in interleukin-1 signaling and activation of NF-kappa-B with the specific adapters RIPK1 and TRAF6. Participates in TNF-dependent transactivation of NF-kappa-B by phosphorylating and activating IKBKB kinase, which in turn leads to the degradation of NF-kappa-B inhibitors. In migrating astrocytes, forms a cytoplasmic complex with PARD6A and is recruited by CDC42 to function in the establishment of cell polarity along with the microtubule motor and dynein. In association with FEZ1, stimulates neuronal differentiation in PC12 cells. In inflammatory response, is required for the T-helper 2 (Th2) differentiation process, including interleukins production, efficient activation of JAK1 and the subsequent phosphorylation and nuclear translocation of STAT6. May be involved in development of allergic airway inflammation (asthma), a process dependent on Th2 immune response. In NF-kappa-B-mediated inflammatory response, can relieve the SETD6-dependent repression of NF-kappa-B target genes by phosphorylating the RELA subunit at 'Ser-311'. Is necessary and sufficient for LTP maintenance in hippocampal CA1 pyramidal cells summary
for PRKCZ : Protein kinase C (PKC) refers to a family of serine/threonine protein kinases grouped by their activationmechanism. Classical or conventional PKCs (cPKC alpha-, betaI- , betaII- and gamma-) are activated byphosphatidylserine in a calcium dependent manner and can bind diacylglycerol (DAG). The Ca2+ insensitivenovel PKCs (nPKCs epsilon-, delta-, theta- and eta- isotypes) are also activated by DAG andphosphatidylserine. The atypical PKCs (aPKCs iota- and zeta-) are insensitive to Ca2+, DAG and phorbolesters. All PKCs isoforms consist of a highly conserved catalytic domain connected to a regulatory domainvia a hinge region. The physiological roles of PKCs are vast. This due to PKC phosphorylation and activationof multiple target proteins, which are involved in signal transduction pathways including, but not limitedto, receptor desensitization, modulation of membrane structure events, regulation of transcription,regulation of cell growth, immune responses, and in learning and memory. Gene Wiki entry for PRKCZ (Protein kinase M zeta/Protein kinase C zeta)
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Genomic Viewsfor PRKCZ gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000001.10 NC_018912.1 NT_004350.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PRKCZ gene promoter: c-Fos AP-1 ATF-2 c-Jun NF-kappaB1 Other transcription factors Search SABiosciences Chromatin IP Primers for PRKCZ Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PRKCZ
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 1p36.33-p36.2 Ensembl cytogenetic band: 1p36.33 HGNC cytogenetic band: 1p36.33-p36.2 PRKCZ Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01P001982: view genomic region
(about GC identifiers )
Start:
1,981,909 bp from pter
End:
2,116,834 bp from pter
Size:
134,926 bases
Orientation:
plus strand
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Proteinsfor PRKCZ gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: KPCZ_HUMAN, Q05513 (See
protein sequence )Recommended Name: Protein kinase C zeta type Size : 592 amino acids; 67660 Da
Subunit : Forms a ternary complex with SQSTM1 and KCNAB2. Forms another ternary complex with SQSTM1 and GABRR3. Forms acomplex with SQSTM1 and MAP2K5 (By similarity). Interacts with PARD6A, PARD6B, PARD6G and SQSTM1. Part of a complex with PARD3, PARD6A or PARD6B or PARD6G and CDC42 or RAC1. Interacts with ADAP1/CENTA1. Forms a ternary complex composed of SQSTM1 and PAWR. Interacts directly with SQSTM1 (Probable). Interacts with IKBKB. Interacts (via the protein kinase domain) with WWC1. Forms a tripartite complex with WWC1 and DDR1, but predominantly in the absence of collagen. Component of the Par polarity complex, composed of at least phosphorylated PRKCZ, PARD3 and TIAM1. Interacts with PDPK1 (via N-terminus region)
Subcellular location : Cytoplasm. Endosome. Cell junction. Note=In the retina, localizes in the terminals of the rodbipolar cells (By similarity). Associates with endosomes. Presence of KRIT1, CDH5 and RAP1B is required for its localization to the cell junction
Sequence caution : Sequence=CAA78813.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Secondary accessions : A8K4N0 A8MU64 Q15207 Q5SYT5 Q969S4Alternative splicing : 2 isoforms : Q05513-1 Q05513-2 Explore the universe of human proteins at neXtProt for PRKCZ: NX_Q05513 Post-translational modifications:
CDH5 is required for its phosphorylation at Thr-410. Phosphorylated by protein kinase PDPK1; phosphorylation is inhibited by the apoptotic C-terminus cleavage product of PKN2. Phosphorylation at Thr-410 by PI3K activates the kinase1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q05513 4/26 DME Specific Peptides for PRKCZ (Q05513 ) (see all 26 )PRKCZ Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins (4 alternative transcripts):
NP_001028753.1 NP_001028754.1 NP_001229803.1 NP_002735.3 ENSEMBL proteins: ENSP00000367830 ENSP00000424945 ENSP00000421587 ENSP00000383712 ENSP00000427085 ENSP00000426412 ENSP00000462105 ENSP00000424228 ENSP00000421869 ENSP00000425643 ENSP00000425317 ENSP00000424763 ENSP00000421219 ENSP00000421350 ENSP00000422349 ENSP00000427134 ENSP00000422764 ENSP00000424398 ENSP00000383711 Reactome Protein details: Q05513 Human Recombinant Protein Products for PRKCZ: Gene Ontology (GO): 5/22 cellular component terms (GO ID links to tree view) (see all 22 ): About this table
PRKCZ for ontologies About GeneDecksing PRKCZ Antibody Products: Assay Products for PRKCZ:
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Protein
Domains / Familiesfor PRKCZ gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PRKCZ for domains About GeneDecksing 5/11 InterPro domains/families (see all 11 ):
Graphical View of Domain Structure for InterPro Entry Q05513 ProtoNet protein and cluster: Q05513
3 Blocks protein families : IPB000270 Octicosapeptide/Phox/Bem1p IPB000961 Protein kinase C-terminal domain IPB002219 Protein kinase C UniProtKB/Swiss-Prot: KPCZ_HUMAN, Q05513 Domain : The OPR domain mediates mutually exclusive interactions with SQSTM1 and PARD6BDomain : The C1 domain does not bind the diacylglycerol (DAG)Similarity : Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamilySimilarity : Contains 1 AGC-kinase C-terminal domainSimilarity : Contains 1 OPR domainSimilarity : Contains 1 phorbol-ester/DAG-type zinc fingerSimilarity : Contains 1 protein kinase domain
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Functionfor PRKCZ gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: KPCZ_HUMAN, Q05513 Function : Calcium- and diacylglycerol-independent serine/threonine-protein kinase that functions inphosphatidylinositol 3-kinase (PI3K) pathway and mitogen-activated protein (MAP) kinase cascade, and is involved in NF-kappa-B activation, mitogenic signaling, cell proliferation, cell polarity, inflammatory response and maintenance of long-term potentiation (LTP). Upon lipopolysaccharide (LPS) treatment in macrophages, or following mitogenic stimuli, functions downstream of PI3K to activate MAP2K1/MEK1-MAPK1/ERK2 signaling cascade independently of RAF1 activation. Required for insulin-dependent activation of AKT3, but may function as an adapter rather than a direct activator. Upon insulin treatment may act as a downstream effector of PI3K and contribute to the activation of translocation of the glucose transporter SLC2A4/GLUT4 and subsequent glucose transport in adipocytes. In EGF-induced cells, binds and activates MAP2K5/MEK5-MAPK7/ERK5 independently of its kinase activity and can activate JUN promoter through MEF2C. Through binding with SQSTM1/p62, functions in interleukin-1 signaling and activation of NF-kappa-B with the specific adapters RIPK1 and TRAF6. Participates in TNF-dependent transactivation of NF-kappa-B by phosphorylating and activating IKBKB kinase, which in turn leads to the degradation of NF-kappa-B inhibitors. In migrating astrocytes, forms a cytoplasmic complex with PARD6A and is recruited by CDC42 to function in the establishment of cell polarity along with the microtubule motor and dynein. In association with FEZ1, stimulates neuronal differentiation in PC12 cells. In inflammatory response, is required for the T-helper 2 (Th2) differentiation process, including interleukins production, efficient activation of JAK1 and the subsequent phosphorylation and nuclear translocation of STAT6. May be involved in development of allergic airway inflammation (asthma), a process dependent on Th2 immune response. In NF-kappa-B-mediated inflammatory response, can relieve the SETD6-dependent repression of NF-kappa-B target genes by phosphorylating the RELA subunit at 'Ser-311'. Is necessary and sufficient for LTP maintenance in hippocampal CA1 pyramidal cells Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme regulation : Atypical PKCs (PRKCI and PRKCZ) exhibit an elevated basal enzymatic activity (that may be due to theinteraction with SMG1 or SQSTM1) and are not regulated by diacylglycerol, phosphatidylserine, phorbol esters or calcium ions. Two specific sites, Thr-410 (activation loop of the kinase domain) and Thr-560 (turn motif), need to be phosphorylated for its full activation. Phosphatidylinositol 3,4,5-trisphosphate might be a physiological activator (By similarity) Enzyme Numbers (IUBMB): EC 2.7.11.13 1 2 EC 2.7.11 2
Gene Ontology (GO): 5/13 molecular function terms (GO ID links to tree view) (see all 13 ): About this table
PRKCZ for ontologies About GeneDecksing Phenotypes: 2 GenomeRNAi human phenotypes for PRKCZ : 5 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Prkcz) :
PRKCZ for phenotypes About GeneDecksing Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRKCZ (see all 6 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRKCZ (see all 7 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): PRKCZ (NM_002744 ) Sino Biological Human cDNA Clone for PRKCZ DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PRKCZ Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PRKCZ
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRKCZ
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Pathways & Interactionsfor PRKCZ gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/93 super-pathways (see all 93 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 ErbB4 Pathway 2 Development_CNTF receptor signaling 3 CCR3 Pathway in Eosinophils 4 G-protein signaling_RAC1 in cellular process 5 Sweet Taste Signaling
Pathway sources See GeneCards unified pathways Show all pathways 5/19 EMD Millipore Pathways for PRKCZ (see all 19 )2 R&D Systems Pathways for PRKCZ 5/74 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PRKCZ (see all 74 )1
Cell Signaling Technology (CST) Pathway for PRKCZ 2 Tocris Bioscience Pathways for PRKCZ 5/21 GeneGo (Thomson Reuters) Pathways for PRKCZ (see all 21 )5/32 BioSystems Pathways for PRKCZ (see all 32 ) 5/7
Reactome Pathways for PRKCZ (see all 7 )3 PharmGKB Pathways for PRKCZ 5
Kegg Pathways (Kegg details for PRKCZ) :
PRKCZ for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PRKCZ STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/190 Interacting proteins for PRKCZ (Q05513 1 , 2 , 3 ENSP00000367830 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 190 )About this table Gene Ontology (GO): 5/40 biological process terms (GO ID links to tree view) (see all 40 ): About this table
PRKCZ for ontologies About GeneDecksing
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Drugs & Compoundsfor PRKCZ gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
PRKCZ for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for PRKCZ
Compounds for PRKCZ available from Tocris Bioscience About this table Compound Action
CAS
# [Glu27]-PKC (19-36) Inactive control peptide for PKC (19-36) (Cat. No. 4058) [309247-49-2] Phorbol 12,13-dibutyrate Protein kinase C activator [37558-16-0] GF 109203X Protein kinase C inhibitor [133052-90-1] Go 6976 Potent protein kinase C inhibitor; selective for alpha and beta isozymes [136194-77-9] PKC (19-36) Pseudosubstrate peptide; inhibitor of PKC [113731-96-7]
10/846 HMDB Compounds for PRKCZ (see all 846 ) About this table 10/28 Novoseek chemical compound relationships for PRKCZ gene (see all 28 ) About this table
Search CenterWatch for drugs/clinical trials and news about PRKCZ / KPCZ
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Transcriptsfor PRKCZ gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for PRKCZ gene (4 alternative transcripts): NM_001033581.1 NM_001033582.1 NM_001242874.1 NM_002744.4 Unigene Cluster for PRKCZ:
Protein kinase C, zeta Hs.496255 [show with all ESTs ] Unigene Representative Sequence: NM_002744 18/27 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 27 ): ENST00000378567 (uc001aiq.3 ) ENST00000468310 ENST00000484419 ENST00000503297 ENST00000479566 ENST00000466651 ENST00000400921 (uc001air.3 ) ENST00000495347 ENST00000461106 (uc010nyw.2 ) ENST00000461465 ENST00000470596 ENST00000496325 ENST00000481140 ENST00000482686 ENST00000486681 ENST00000470986 ENST00000470511 ENST00000471018 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRKCZ (see all 6 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRKCZ (see all 7 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): PRKCZ (NM_002744 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PRKCZ Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PRKCZ
Additional cDNA sequence: AK097627.1 AK131526.1 AK290995.1 AK294649.1 AK294782.1 AK302160.1 AK310372.1 BC008058.2 BC014270.2 BC128516.1 BT007082.1 L14283.1 Z15108.1
24/41 DOTS entries (see all 41 ): DT.449881 DT.75173685
DT.95267145 DT.100808988 DT.100037896 DT.95267152 DT.92450209 DT.95267155 DT.100742693 DT.121417966 DT.100815035 DT.92450220 DT.121417885 DT.75194260 DT.95267147 DT.100639808 DT.100685232 DT.92411816 DT.92450205 DT.92450207 DT.95234995 DT.121417805 DT.121417828 DT.75100734 24/367 AceView cDNA sequences (see all 367 ):
BQ446068 AI188467 AK092409 AW027318 BM055025 BE898490 BE304409 BC008058 BC014270 AI435266 NM_002744 BU752466 BM562781 CK821048 BF992427 BQ003414 AI760027 AU156567 CR609425 AI627314 BM055304 BQ183175 AL538626 BX094098 GeneLoc Exon Structure 5/22 Alternative Splicing Database (ASD) splice patterns (SP) for PRKCZ (see all 22 ) About this scheme ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15 ^ 16 ^ 17a · 17b · 17c ^ 18 ^ SP1 :     -       -       -   -   -   -   -   -   -   -   -   -   -   -     -         -   SP2 :                                   -   -   -     -         -   SP3 :                                   -   -   -     -         -   SP4 :                                           -         -   SP5 :                         -   -   -   -   -   -   -   -     -         -  
ExUns: 19a · 19b · 19c · 19d · 19e ^ 20a · 20b ^ 21 ^ 22a · 22b ^ 23 ^ 24a · 24b ^ 25a · 25b ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 SP1 : -   -   -   -   -                               -   -       SP2 : -   -   -   -   -                                       SP3 :                                               SP4 : -                                               SP5 : -   -   -   -   -                                      
ECgene alternative splicing isoforms for PRKCZ
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Expression for PRKCZ gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section PRKCZ expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CGGTTTCCAAAbout this image PRKCZ expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See PRKCZ Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PRKCZ SOURCE GeneReport for Unigene cluster: Hs.496255 UniProtKB/Swiss-Prot: KPCZ_HUMAN, Q05513 Tissue specificity : Expressed in brain, and to a lesser extent in lung, kidney and testis SABiosciences Expression via Pathway-Focused PCR Arrays including PRKCZ (see all 6 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PRKCZBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat PRKCZ QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PRKCZ QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PRKCZ In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRKCZ
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Orthologsfor PRKCZ gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for PRKCZ gene from 4/21 species (see all 21 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
PRKCZ1
protein kinase C, zeta
78.43(n) 89.86(a)
 
419399 XM_417561.3 XP_417561.3
zebrafish (Danio rerio)
Actinopterygii
prkcz1
protein kinase C, zeta
74.04(n) 81.76(a)
 
555737 NM_001030091.1 NP_001025262.1
fruit fly (Drosophila melanogaster)
Insecta
aPKC3
oocyte determination protein serine/threonine more
62(a)
 
--
worm (Caenorhabditis elegans)
Secernentea
pkc-36
Protein kinase C-like 3
55(a)
1 → many
II(5380008-5384154)
ENSEMBL Gene Tree for PRKCZ (if available)TreeFam Gene Tree for PRKCZ (if available)
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Paralogsfor PRKCZ gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for PRKCZ gene PRKCQ 2 PRKCH 2 PRKCB 2 PRKCI 2 PRKCE 2 PKN1 2 PRKCA 2 PRKCD 2 PKN3 2 PRKCG 2 PKN2 2 18/71 SIMAP similar genes for PRKCZ using alignment to 17 protein entries: KPCZ_HUMAN (see all proteins )
(see all similar genes ):PRKCI PKN2 PRKCB MARK4 RPS6KA5 PRKCH AKT1 PKN1 SGK2 AKT3 KIN27 RPS6KA3 PRKCG PRKCE PRKACB NUAK1 AKT2 PRKACA
PRKCZ for paralogs About GeneDecksing
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Genomic Variantsfor PRKCZ gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 1 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for PRKCZ (1981909 - 2116834 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 22 variations for PRKCZ 9 CNVs : 4192 63811 43449 97254 74288 84004 63891 74292 3276 13 Indels : 97253 84003 44501 24048 44493 42869 74290 74289 84006 74291 84005 41369 44494
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PRKCZ
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Disorders
/ Diseasesfor PRKCZ gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
PRKCZ for disorders About GeneDecksing
OMIM gene information: 176982
OMIM disorders : --20/39 diseases for PRKCZ (see all 39 ): About MalaCards parainfluenza virus type 3 soft tissue sarcoma myofibrillar myopathy intrahepatic cholangiocarcinoma insulin resistance kaposi's sarcoma alzheimer's disease pancreatic carcinoma myopathy nasopharyngitis sarcoma cholangiocarcinoma astrocytoma breast cancer pancreatitis glioblastoma osteoporosis obesity cervical cancer carcinoma 10/15 Novoseek disease relationships for PRKCZ gene (see all 15 ) About this table
Genetic Association Database (GAD): PRKCZ Human Genome Epidemiology (HuGE) Navigator: PRKCZ (8 documents) Export disorders for PRKCZ gene to outside databases
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Publicationsfor PRKCZ gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for PRKCZ gene, integrated from 9 sources (see all 425 ): (articles sorted by number of sources associating them with PRKCZ) Utopia : connect your pdf to the dynamic world of online information
Regulation of protein kinase C zeta by PI 3-kinase and PDK-1. (PubMed id 9768361) 1 , 2 , 9 Chou M.M.... Toker A. (1998) The cDNA sequence encoding human protein kinase C-zeta. (PubMed id 8224878) 1 , 2 , 9 Barbee J.L.... Burns D.J. (1993) PB1 domain-mediated heterodimerization in NADPH oxidase and signaling complexes of atypical protein kinase C with Par6 and p62. (PubMed id 12887891) 1 , 2 , 9 Wilson M.I.... Williams R.L. (2003) Protein kinase C zeta plays a central role in activation of the p42/44 mitogen-activated protein kinase by endotoxin in alveolar macrophages. (PubMed id 11035106) 1 , 2 , 9 Monick M.M....Hunninghake G.W. (2000) KIBRA interacts with discoidin domain receptor 1 to modulate collagen-induced signalling. (PubMed id 18190796) 1 , 2 Hilton H.N.... Ormandy C.J. (2008) The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414) 1 , 2 Gregory S.G.... Bentley D.R. (2006) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Protein kinase C/zeta (PRKCZ) gene is associated with type 2 diabetes in Han population of North China and analysis of its haplotypes. (PubMed id 12970910) 1 , 4 Li Y.F....Fang F.D. (2003) Centaurin-alpha(1) associates with and is phosphorylated by isoforms of protein kinase C. (PubMed id 12893243) 1 , 2 Zemlickova E.... Aitken A. (2003)
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External Searches for PRKCZ gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing PRKCZ gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing PRKCZ gene
(According to HUGE )
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Specialized Databases showing PRKCZ gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for PRKCZ gene: Search GeneIP for patents involving PRKCZ GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PRKCZ gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
OriGene Antibodies for PRKCZ OriGene shRNA RFP for PRKCZ OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for PRKCZ OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PRKCZ OriGene Protein Over-expression Lysate for PRKCZ Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for PRKCZ OriGene 3'-UTR Clone for PRKCZ OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PRKCZ OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PRKCZ Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for PRKCZ OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for PRKCZ OriGene Custom Protein Services for PRKCZ OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PRKCZ QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PRKCZ QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PRKCZ QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat PRKCZ QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PRKCZ QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PRKCZ
Antibodies & Assays for PRKCZ   (PKCZ)
Tocris compounds for PRKCZ
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRKCZ
ThermoFisher Antibodies for PRKCZ
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PRKCZ
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