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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PRKCQ Gene

protein-coding   GIFtS: 74
GCID: GC10M006509

Protein Kinase C, Theta
Microbiology & Infectious Diseases Congress
  31 related diseases
at
MalaCards
 

Aliases
for PRKCQ gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section
Aliases
Protein Kinase C, Theta1 2
PRKCT2 3
nPKC-theta2 3
EC 2.7.11.133 8
Protein Kinase C Theta Type2
EC 2.7.118

External Ids:    HGNC: 94101   Entrez Gene: 55882   Ensembl: ENSG000000656757   OMIM: 6004485   UniProtKB: Q047593   

Export aliases for PRKCQ gene to outside databases

Previous GC identifers: GC10M006413 GC10M006619 GC10M006473


Summaries
for PRKCQ gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
Entrez Gene summary for PRKCQ Gene:
Protein kinase C (PKC) is a family of serine- and threonine-specific protein kinases that can be activated by calcium
and the second messenger diacylglycerol. PKC family members phosphorylate a wide variety of protein targets and are
known to be involved in diverse cellular signaling pathways. PKC family members also serve as major receptors for
phorbol esters, a class of tumor promoters. Each member of the PKC family has a specific expression profile and is
believed to play a distinct role. The protein encoded by this gene is one of the PKC family members. It is a
calcium-independent and phospholipid-dependent protein kinase. This kinase is important for T-cell activation. It is
required for the activation of the transcription factors NF-kappaB and AP-1, and may link the T cell receptor (TCR)
signaling complex to the activation of the transcription factors. (provided by RefSeq, Jul 2008)

GeneCards Summary for PRKCQ Gene: 
PRKCQ (protein kinase C, theta) is a protein-coding gene. Diseases associated with PRKCQ include gastrointestinal stromal tumor, and common variable immunodeficiency, and among its related super-pathways are fMLP Pathway and Development VEGF signaling via VEGFR2 - generic cascades. GO annotations related to this gene include protein kinase C activity and identical protein binding. An important paralog of this gene is ENSG00000258989.

UniProtKB/Swiss-Prot: KPCT_HUMAN, Q04759
Function: Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that
mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation,
differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN,
NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which
in turn are essential for IL2 production, and participates to the calcium-dependent NFATC1 and NFATC2 transactivation.
Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several
serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then
activates IKK complex, resulting in nuclear translocation and activation of NFKB1. May also play an indirect role in
activation of the non-canonical NF-kappa-B (NFKB2) pathway. In the signaling pathway leading to JUN activation, acts
by phosphorylating the mediator STK39/SPAK and may not act through MAP kinases signaling. Plays a critical role in
TCR/CD28-induced NFATC1 and NFATC2 transactivation by participating in the regulation of reduced inositol
1,4,5-trisphosphate generation and intracellular calcium mobilization. After costimulation of T-cells through CD28 can
phosphorylate CBLB and is required for the ubiquitination and subsequent degradation of CBLB, which is a prerequisite
for the activation of TCR. During T-cells differentiation, plays an important role in the development of T-helper 2
(Th2) cells following immune and inflammatory responses, and, in the development of inflammatory autoimmune diseases,
is necessary for the activation of IL17-producing Th17 cells. May play a minor role in Th1 response. Upon TCR
stimulation, mediates T-cell protective survival signal by phosphorylating BAD, thus protecting T-cells from
BAD-induced apoptosis, and by up-regulating BCL-X(L)/BCL2L1 levels through NF-kappa-B and JUN pathways. In platelets,
regulates signal transduction downstream of the ITGA2B, CD36/GP4, F2R/PAR1 and F2RL3/PAR4 receptors, playing a
positive role in 'outside-in' signaling and granule secretion signal transduction. May relay signals from the
activated ITGA2B receptor by regulating the uncoupling of WASP and WIPF1, thereby permitting the regulation of actin
filament nucleation and branching activity of the Arp2/3 complex. May mediate inhibitory effects of free fatty acids
on insulin signaling by phosphorylating IRS1, which in turn blocks IRS1 tyrosine phosphorylation and downstream
activation of the PI3K/AKT pathway. Phosphorylates MSN (moesin) in the presence of phosphatidylglycerol or
phosphatidylinositol. Phosphorylates PDPK1 at 'Ser-504' and 'Ser-532' and negatively regulates its ability to
phosphorylate PKB/AKT1

summary for PRKCQ Gene:
Protein kinase C (PKC) refers to a family of serine/threonine protein kinases grouped by their activation
mechanism. Classical or conventional PKCs (cPKC alpha-, betaI- , betaII- and gamma-) are activated by
phosphatidylserine in a calcium dependent manner and can bind diacylglycerol (DAG). The Ca2+ insensitive
novel PKCs (nPKCs epsilon-, delta-, theta- and eta- isotypes) are also activated by DAG and
phosphatidylserine. The atypical PKCs (aPKCs iota- and zeta-) are insensitive to Ca2+, DAG and phorbol
esters. All PKCs isoforms consist of a highly conserved catalytic domain connected to a regulatory domain
via a hinge region. The physiological roles of PKCs are vast. This due to PKC phosphorylation and activation
of multiple target proteins, which are involved in signal transduction pathways including, but not limited
to, receptor desensitization, modulation of membrane structure events, regulation of transcription,
regulation of cell growth, immune responses, and in learning and memory.

Gene Wiki entry for PRKCQ Gene


Genomic Views
for PRKCQ gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000010.10  NT_008705.16  NC_018921.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PRKCQ gene promoter:
         GR   AML1a   FOXF2   Pbx1a   Nkx2-2   GR-beta   Nkx2-5   Nkx5-1   HNF-4alpha1   GR-alpha   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: PRKCQ promoter sequence
   Search SABiosciences Chromatin IP Primers for PRKCQ

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PRKCQ


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 10p15   Ensembl cytogenetic band:  10p14   HGNC cytogenetic band: 10p15

PRKCQ Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PRKCQ gene location

GeneLoc information about chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10M006509:  view genomic region     (about GC identifiers)

Start:
 6,469,105 bp from pter      End:
 6,622,263 bp from pter
Size:
 153,159 bases      Orientation:
 minus strand

Proteins
for PRKCQ gene

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section
UniProtKB/Swiss-Prot: KPCT_HUMAN, Q04759 (See protein sequence)
Recommended Name: Protein kinase C theta type  
Size: 706 amino acids; 81865 Da
Cofactor: Magnesium
Subunit: Interacts with GLRX3 (via N-terminus). Interacts with ECT2. Part of a lipid raft complex composed at least of
BCL10, CARD11, MALT1 and IKBKB
Subcellular location: Cytoplasm. Cell membrane; Peripheral membrane protein. Note=In resting T-cells, mostly localized
in cytoplasm. In response to TCR stimulation, associates with lipid rafts and then localizes in the immunological
synapse
5 PDB 3D structures from and Proteopedia for PRKCQ:
1XJD (3D)        2ENJ (3D)        2ENN (3D)        2ENZ (3D)        2JED (3D)    
Secondary accessions: Q14DH6 Q3MJF1 Q64FY5 Q9H508 Q9H549
Alternative splicing: 2 isoforms:  Q04759-1   Q04759-2   

Explore the universe of human proteins at neXtProt for PRKCQ: NX_Q04759

Explore proteomics data for PRKCQ at MOPED 

Post-translational modifications:

  • UniProtKB: Autophosphorylation at Thr-219 is required for targeting to the TCR and cellular function of PRKCQ upon antigen
    • receptor ligation. Following TCR stimulation, phosphorylated at Tyr-90 and Ser-685
  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_Q04759

    • 4/22 DME Specific Peptides for PRKCQ (Q04759) (see all 22)
     GVLLYEM  DFGMCKE  YIAPEIL  GQSPFHG 

    PRKCQ Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    PRKCQ Protein Expression
    REFSEQ proteins (4 alternative transcripts): 
    NP_001229342.1  NP_001269573.1  NP_001269574.1  NP_006248.1  

    ENSEMBL proteins: 
     ENSP00000263125   ENSP00000380361   ENSP00000441752  
    Reactome Protein details: Q04759
    Human Recombinant Protein Products for PRKCQ: 
    EMD Millipore Purified and/or Recombinant PRKCQ Protein
    Browse R&D Systems for human recombinant proteins
    Enzo Life Sciences proteins for PRKCQ
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate for PRKCQ
    OriGene Custom MassSpec 
    OriGene Custom Protein Services for PRKCQ
    GenScript Custom Purified and Recombinant Proteins Services for PRKCQ
    Novus Biologicals PRKCQ Proteins
    Novus Biologicals PRKCQ Lysates
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates 
    ProSpec Recombinant Protein for PRKCQ
    Browse Proteins at Cloud-Clone Corp. 

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001772immunological synapse IEA--
    GO:0005622intracellular NAS--
    GO:0005737cytoplasm ----
    GO:0005829cytosol TAS--
    GO:0005886plasma membrane TAS--

    PRKCQ for ontologies           About GeneDecksing



    PRKCQ Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of PRKCQ
    R&D Systems Antibodies for PRKCQ (PKC theta)
    Cell Signaling Technology (CST) Antibodies for PRKCQ  (PKCT)
    OriGene Antibodies for PRKCQ
    OriGene Custom Antibody Services for PRKCQ
    GenScript Custom Superior Antibodies Services for PRKCQ
    Novus Biologicals PRKCQ Antibodies
    Abcam antibodies for PRKCQ
    Browse Antibodies at Cloud-Clone Corp. 
    ThermoFisher Antibody for PRKCQ
    LSBio Antibodies in human, mouse, rat for PRKCQ 

    Assay Products for PRKCQ: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Assay Services for PRKCQ
    Browse R&D Systems for biochemical assays
    GenScript PRKCQ-Activity-based Kinase Assay for Compound Screening
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs at Cloud-Clone Corp. 
    Browse CLIAs at Cloud-Clone Corp.

    Protein Domains /
    Families
    for PRKCQ gene

    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    		 IUPHAR Guide to PHARMACOLOGY protein family classification: protein kinase C, theta 
    Delta subfamily
    Protein kinase C

    5/12 InterPro protein domains (see all 12):
     IPR017441 Protein_kinase_ATP_BS
     IPR014376 Prot_kin_PKC_delta
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR020454 DAG/PE-bd
     IPR011009 Kinase-like_dom

    Graphical View of Domain Structure for InterPro Entry Q04759

    ProtoNet protein and cluster: Q04759

    2 Blocks protein domains:
    IPB000961 Protein kinase C-terminal domain
    IPB002219 Protein kinase C


    UniProtKB/Swiss-Prot: KPCT_HUMAN, Q04759
    Domain: The C1 domain, containing the phorbol ester/DAG-type region 1 (C1A) and 2 (C1B), is the diacylglycerol sensor
    and the C2 domain is a non-calcium binding domain
    Similarity: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily
    Similarity: Contains 1 AGC-kinase C-terminal domain
    Similarity: Contains 1 C2 domain
    Similarity: Contains 2 phorbol-ester/DAG-type zinc fingers
    Similarity: Contains 1 protein kinase domain


    PRKCQ for domains           About GeneDecksing


    Function
    for PRKCQ gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section
    Molecular Function:

         UniProtKB/Swiss-Prot Summary: KPCT_HUMAN, Q04759
    Function: Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that
    mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation,
    differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN,
    NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which
    in turn are essential for IL2 production, and participates to the calcium-dependent NFATC1 and NFATC2 transactivation.
    Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several
    serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then
    activates IKK complex, resulting in nuclear translocation and activation of NFKB1. May also play an indirect role in
    activation of the non-canonical NF-kappa-B (NFKB2) pathway. In the signaling pathway leading to JUN activation, acts
    by phosphorylating the mediator STK39/SPAK and may not act through MAP kinases signaling. Plays a critical role in
    TCR/CD28-induced NFATC1 and NFATC2 transactivation by participating in the regulation of reduced inositol
    1,4,5-trisphosphate generation and intracellular calcium mobilization. After costimulation of T-cells through CD28 can
    phosphorylate CBLB and is required for the ubiquitination and subsequent degradation of CBLB, which is a prerequisite
    for the activation of TCR. During T-cells differentiation, plays an important role in the development of T-helper 2
    (Th2) cells following immune and inflammatory responses, and, in the development of inflammatory autoimmune diseases,
    is necessary for the activation of IL17-producing Th17 cells. May play a minor role in Th1 response. Upon TCR
    stimulation, mediates T-cell protective survival signal by phosphorylating BAD, thus protecting T-cells from
    BAD-induced apoptosis, and by up-regulating BCL-X(L)/BCL2L1 levels through NF-kappa-B and JUN pathways. In platelets,
    regulates signal transduction downstream of the ITGA2B, CD36/GP4, F2R/PAR1 and F2RL3/PAR4 receptors, playing a
    positive role in 'outside-in' signaling and granule secretion signal transduction. May relay signals from the
    activated ITGA2B receptor by regulating the uncoupling of WASP and WIPF1, thereby permitting the regulation of actin
    filament nucleation and branching activity of the Arp2/3 complex. May mediate inhibitory effects of free fatty acids
    on insulin signaling by phosphorylating IRS1, which in turn blocks IRS1 tyrosine phosphorylation and downstream
    activation of the PI3K/AKT pathway. Phosphorylates MSN (moesin) in the presence of phosphatidylglycerol or
    phosphatidylinositol. Phosphorylates PDPK1 at 'Ser-504' and 'Ser-532' and negatively regulates its ability to
    phosphorylate PKB/AKT1
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Novel PKCs (PRKCD, PRKCE, PRKCH and PRKCQ) are calcium-insensitive, but activated by diacylglycerol
    (DAG) and phosphatidylserine. Three specific sites; Thr-538 (activation loop of the kinase domain), Ser-676 (turn
    motif) and Ser-695 (hydrophobic region), need to be phosphorylated for its full activation

         Genatlas biochemistry entry for PRKCQ:
    protein kinase C,theta polypeptide,critically involved in the regulation of differentiation and proliferation of T
    lymphocytes

         Enzyme Numbers (IUBMB): EC 2.7.11.131 2 EC 2.7.112

         Gene Ontology (GO): 5/10 molecular function terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004672protein kinase activity ----
    GO:0004674protein serine/threonine kinase activity TAS--
    GO:0004697protein kinase C activity IEA--
    GO:0004713protein tyrosine kinase activity ----
    GO:0004842ubiquitin-protein ligase activity TAS--
         
    PRKCQ for ontologies           About GeneDecksing


    Phenotypes:
         9 GenomeRNAi human phenotypes for PRKCQ:
     Decreased substrate adherent c  Decreased telomerase activity  Decreased viability  Gemcitabine induced cell-death 
     Increased apoptosis  Increased cell death in breast  Increased viability with TRAIL  Synthetic lethal with imatinib 
     Upregulation of Wnt/beta-caten 

         13 MGI mutant phenotypes (inferred from 3 alleles) (MGI details for Prkcq):
     adipose tissue  cellular  digestive/alimentary  growth/size  hematopoietic system 
     homeostasis/metabolism  immune system  mortality/aging  muscle  nervous system 
     no phenotypic analysis  respiratory system  tumorigenesis 

    PRKCQ for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for PRKCQ: Prkcqtm1Litt Prkcqtm1.1Bai
       inGenious Targeting Laboratory - Custom generated mouse model solutions for PRKCQ 
       inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for PRKCQ

    miRNA
    Products:        
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PRKCQ
    8/11 QIAGEN miScript miRNA Assays for microRNAs that regulate PRKCQ (see all 11):
    hsa-miR-3659 hsa-miR-224 hsa-miR-3606 hsa-miR-526b hsa-miR-578 hsa-miR-513c hsa-miR-1297 hsa-miR-921
    SwitchGear 3'UTR luciferase reporter plasmid: PRKCQ 3' UTR sequence
    Inhib. RNA
    Products:            		Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for PRKCQ
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PRKCQ
    Sirion Biotech Custom design and validation of potent shRNA sequences against PRKCQ

    Gene Editing
    Products:    		DNA2.0 Custom Protein Engineering Service for PRKCQ
    Sirion Biotech Customized adenovirus for overexpression of PRKCQ
                         Customized adenovirus for potent knockdown of PRKCQ

    Clone
    Products:             		Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene clones in human, mouse for PRKCQ (see all 8)
    OriGene ORF clones in mouse, rat for PRKCQ
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: PRKCQ (NM_006257)
    Sino Biological Human cDNA Clone for PRKCQ
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for PRKCQ
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PRKCQ

    Cell Line
    Products:             		GenScript Custom overexpressing Cell Line Services for PRKCQ
    Search LifeMap BioReagents cell lines for PRKCQ
    Sirion Biotech Customized stable knockdown cell line services for PRKCQ
                         Customized inducible knockdown cell line services for PRKCQ
                         Customized stable overexpressing cell line services for PRKCQ
                         Customized inducible overexpressing cell line services for PRKCQ

    In Situ Assay
    Products:       
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRKCQ


    Pathways & Interactions
    for PRKCQ gene

    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section

    SuperPaths for PRKCQ About   (see all 92)                                                                                              See pathways by source

    SuperPathSelected contained pathways About (see all per SuperPath)
    1fMLP Pathway
    		CCR3 Pathway in Eosinophils0.44
    		CXCR4 Pathway0.39
    		VEGF and S-1P Signaling0.44
    		Alpha-Adrenergic Signaling0.38
    		fMLP Pathway0.43
    		Huntington's Disease Pathway0.30
    		Signal transduction Activation of PKC via G-Protein coupled receptor0.42
    2Development VEGF signaling via VEGFR2 - generic cascades
    		Development VEGF signaling via VEGFR2 - generic cascades0.75
    		VEGF - VEGF R2 Signaling Pathways 0.39
    		Development VEGF signaling and activation0.75
    3Development EGFR signaling pathway
    		Development EGFR signaling pathway0.87
    		EGF Pathway0.41
    4Signal transduction cAMP signaling
    		Signal transduction cAMP signaling0.44
    		G Protein Signaling Pathways0.44
    5B cell receptor signaling pathway
    		T cell receptor signaling pathway0.38
    		TCR Signaling Pathway0.35

    Pathways by source                                                                                                                                                                 See SuperPaths
    Show all pathways

    5/19 EMD Millipore Pathways for PRKCQ (see all 19)
        Transcription Transcription factor Tubby signaling pathways
    Development VEGF signaling and activation
    Immune response CD16 signaling in NK cells
    Immune response Role of DAP12 receptors in NK cells
    Signal transduction Activation of PKC via G-Protein coupled receptor

    3 R&D Systems Pathways for PRKCQ
        Wnt Signaling Pathway
    Adipocytokines & Insulin Signaling
    VEGF - VEGF R2 Signaling Pathways

    5/79 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PRKCQ (see all 79)
        UVB-Induced MAPK Signaling
    Molecular Mechanisms of Cancer
    Intracellular Calcium Signaling
    Visual Cycle in Retinal Rods
    NF-kappaB Activation by Viruses

    2 Cell Signaling Technology (CST) Pathways for PRKCQ
        Ca, cAMP and Lipid Signaling
    Lymphocyte Signaling

    2 Tocris Bioscience Pathways for PRKCQ
        NF-kappaB Pathway
    VEGF Pathway

    5/18 GeneGo (Thomson Reuters) Pathways for PRKCQ (see all 18)
        Signal transduction cAMP signaling
    Development EGFR signaling pathway
    Immune response CD28 signaling
    Immune response CD16 signaling in NK cells
    Signal transduction Activation of PKC via G-Protein coupled receptor

    5/17 BioSystems Pathways for PRKCQ (see all 17)
        Myometrial Relaxation and Contraction Pathways
    Wnt Signaling Pathway
    Insulin Signaling
    Wnt Signaling Pathway and Pluripotency
    G Protein Signaling Pathways


    5/27        Reactome Pathways for PRKCQ (see all 27)
        Diseases associated with visual transduction
    Developmental Biology
    FCERI mediated NF-kB activation
    Visual phototransduction
    Apoptosis

    2 PharmGKB Pathways for PRKCQ
        Beta-agonist/Beta-blocker Pathway, Pharmacodynamics
    VEGF Signaling Pathway

    5/6         Kegg Pathways  (Kegg details for PRKCQ) (see all 6):
        NF-kappa B signaling pathway
    Vascular smooth muscle contraction
    Tight junction
    T cell receptor signaling pathway
    Adipocytokine signaling pathway


    PRKCQ for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PRKCQ

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/107 Interacting proteins for PRKCQ (Q047591, 2, 3 ENSP000002631254) via UniProtKB, MINT, STRING, and/or I2D (see all 107)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    FYNP062411, 3, ENSP000003576564EBI-374762,EBI-515315 I2D: score=4 STRING: ENSP00000357656
    BTKQ061871, 3, ENSP000003081764EBI-374762,EBI-624835 I2D: score=3 STRING: ENSP00000308176
    LCKP062391, 3, ENSP000003378254EBI-374762,EBI-1348 I2D: score=3 STRING: ENSP00000337825
    MARK3P274482, 3, ENSP000004113974MINT-4787821 I2D: score=3 STRING: ENSP00000411397
    MALT1Q9UDY82, 3, ENSP000003192794MINT-4787847 I2D: score=2 STRING: ENSP00000319279
    About this table

    Gene Ontology (GO): 5/29 biological process terms (GO ID links to tree view) (see all 29):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001558regulation of cell growth NAS8444877
    GO:0006355regulation of transcription, DNA-dependent ISS--
    GO:0006468protein phosphorylation NAS--
    GO:0006509membrane protein ectodomain proteolysis ISS--
    GO:0006915apoptotic process TAS--

    PRKCQ for ontologies           About GeneDecksing



    Drugs & Compounds
    for PRKCQ gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, IUPHAR, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    PRKCQ for compounds           About GeneDecksing

    EMD Millipore small molecules for PRKCQ:
    Small Molecule - inhibitor
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    Compounds for PRKCQ available from Tocris Bioscience    About this table
    CompoundAction CAS #
    GF 109203XProtein kinase C inhibitor[133052-90-1]
    Phorbol 12-myristate 13-acetateProtein kinase C activator[16561-29-8]
    ZIPCell-permeable inhibitor of atypical PKC isozyme PKMzeta[863987-12-6]
    Go 6983Broad spectrum PKC inhibitor[133053-19-7]
    Go 6976Potent protein kinase C inhibitor; selective for alpha and beta isozymes[136194-77-9]

    10/847 HMDB Compounds for PRKCQ (see all 847)    About this table
    CompoundSynonyms CAS #PubMed Ids
    DG(16:0e/18:0/0:0)2-Octadecanoyl-1-hexadecyl-sn-glycerol (see all 2)--12486725
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    CalciumCa (see all 2)7440-70-2--
    DG(14:0/14:0/0:0)DAG(14:0/14:0) (see all 9)----
    DG(14:0/14:1(9Z)/0:0)DAG(14:0/14:1) (see all 15)----
    DG(14:0/15:0/0:0)Diacylglycerol(29:0) (see all 9)----
    DG(14:0/16:0/0:0)DAG(30:0) (see all 9)----
    DG(14:0/16:1(9Z)/0:0)DG(30:1) (see all 15)----
    DG(14:0/18:0/0:0)DG(14:0/18:0) (see all 9)----

    3 DrugBank Compounds for PRKCQ    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Phosphonoserine-- --target--17139284 17016423
    Phosphonothreonine-- --target--17139284 17016423
    Staurosporine-- 62996-74-1target--17139284 17016423

    5 Novoseek inferred chemical compound relationships for PRKCQ gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tyrosine 43.5 1 19966856 (1)
    serine 34.1 2 14704736 (1), 19966856 (1), 17567459 (1)
    phosphatidylinositol 28.7 1 18227156 (1)
    lipid 16.6 6 14673152 (1), 12234921 (1), 15699116 (1), 11120819 (1) (see all 6)
    calcium 0 6 17825894 (2), 15912140 (1), 15699116 (1)

    Search CenterWatch for drugs/clinical trials and news about PRKCQ / KPCT

    Transcripts
    for PRKCQ gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section
    REFSEQ mRNAs for PRKCQ gene (4 alternative transcripts): 
    NM_001242413.2  NM_001282644.1  NM_001282645.1  NM_006257.4  

    Unigene Cluster for PRKCQ:

    Protein kinase C, theta
    Hs.498570  [show with all ESTs]
    Unigene Representative Sequence: BX647657
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000263125(uc001iji.1 uc001ijj.2 uc009xim.2 uc009xin.2 uc010qax.2)
    ENST00000397176 ENST00000539722
    Congresses - knowledge worth sharing:  
    European Congress of Clinical Microbiology and Infectious Diseases (ECCMID) 10 - 13 May 2014

    miRNA
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    hsa-miR-3659 hsa-miR-224 hsa-miR-3606 hsa-miR-526b hsa-miR-578 hsa-miR-513c hsa-miR-1297 hsa-miR-921
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    Additional mRNA sequence: 

    AK293935.1 AK308099.1 AK312411.1 AY702977.1 BC101465.1 BC113359.1 BC143222.1 BX647657.1 
    L01087.1 L07032.1 

    5 DOTS entries:

    DT.455113  DT.100670612  DT.121297809  DT.121297788  DT.75144546 

    24/43 AceView cDNA sequences (see all 43):

    BF592799 AW780437 AU099414 AA234440 NM_006257 AW593784 AA384107 AI184050 
    BE501078 BX646952 BX646951 T28732 R14084 W77909 BX279949 W72149 
    BX437722 AY702977 BQ006763 AA234512 BP360104 AA301014 AI075190 AI282639 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for PRKCQ    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18a · 18b
    SP1:              -                 -                                                                                                   
    SP2:                                -                                                                                                   
    SP3:              -                                                                                                                     


    ECgene alternative splicing isoforms for PRKCQ

    Expression
    for PRKCQ gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PRKCQ expression in normal human tissues (normalized intensities)      PRKCQ embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: GCAAACAGGT
    PRKCQ Expression
    About this image


    PRKCQ expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/10 selected tissues (see all 10) fully expand
     
     Skeletal Muscle (Muscoskeletal System)    fully expand to see all 20 entries
             Mononuclear Myocytes Thoracic Epaxial Myotome
     
     Brain (Nervous System)    fully expand to see all 19 entries
             Thalamus
             Septum
     
     Somite (Muscoskeletal System)    fully expand to see all 15 entries
             Mononuclear Myocytes Cervical Primary Hypaxial Myotome
     
     Spinal Cord (Nervous System)    fully expand to see all 7 entries
             Dorsal Spinal Cord Progenitor Cells Spinal Dorsal Columns
             Spinal Dorsal Columns
             Dorsal Horn
     
     Limb (Muscoskeletal System)    fully expand to see all 4 entries
             Mononuclear Myocytes Hindlimb Dorsal Muscle

    See PRKCQ Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PRKCQ

    SOURCE GeneReport for Unigene cluster: Hs.498570

    UniProtKB/Swiss-Prot: KPCT_HUMAN, Q04759
    Tissue specificity: Expressed in skeletal muscle, T-cells, megakaryoblastic cells and platelets

        SABiosciences Expression via Pathway-Focused PCR Arrays including PRKCQ: 
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    Orthologs
    for PRKCQ gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
    This gene was present in the common ancestor of animals.

    Orthologs for PRKCQ gene from 6/13 species (see all 13)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    mouse
    (Mus musculus)    		 Mammalia Prkcq1 , 5 protein kinase C, theta1, 5 87.33(n)1
    94.89(a)1    		   2 (8.42 cM)5
    187611  NM_008859.21  NP_032885.11 
     111721135 
    chicken
    (Gallus gallus)    		 Aves PRKCQ1 protein kinase C, theta 77.37(n)
    83.1(a)    		   776459  XM_001235979.2  XP_001235980.2 
    lizard
    (Anolis carolinensis)    		 Reptilia PRKCQ6
    		 Uncharacterized protein
    		 65(a)
    		 1 ↔ 1
    		 5(482253-516161)
    zebrafish
    (Danio rerio)    		 Actinopterygii prkcq1 protein kinase C, theta 69.98(n)
    75.18(a)    		   555521  NM_001089370.2  NP_001082839.2 
    fruit fly
    (Drosophila melanogaster)    		 Insecta Pk17E3 protein amino acid phosphorylation protein
    serine/threonine more    		 33(a)     --
    worm
    (Caenorhabditis elegans)    		 Secernentea tpa-13 protein kinase C 47(a)   IV(92052-110151)   --


    ENSEMBL Gene Tree for PRKCQ (if available)
    TreeFam Gene Tree for PRKCQ (if available)

    Paralogs
    for PRKCQ gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PRKCQ gene
    ENSG000002589892  PRKCH2  PRKCB2  PRKCI2  PRKCE2  PKN12  PRKCA2  PRKCZ2  
    PRKCD2  PKN32  PRKCG2  PKN22  
    18/57 SIMAP similar genes for PRKCQ using alignment to 2 protein entries:     KPCT_HUMAN (see all proteins) (see all similar genes):
    PRKCD    PRKD1    MARK4    PRKCH    AKT1    KIN27
    RPS6KB1    PRKACB    PRKCE    NUAK1    STK32A    PRKACG
    SGK2    RPS6KA2    AKT2    PKN1    PRKACA    RPS6KA1

    PRKCQ for paralogs           About GeneDecksing



    Genomic Variants
    for PRKCQ gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/3498 SNPs in PRKCQ are shown (see all 3498)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 10 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    VAR_0423194
    		A colorectal adenocarcinoma sample4--see VAR_0423192 K N mis40--------
    rs1424375731,2
    		Cuntested16553150(+) TCTGCC/TCGTTC 4 E G mis11Minor allele frequency- T:0.00NA 4550
    rs8063991,2
    		C,F,O,A,H--6468605(+) GCTCCG/ATATAG 2 -- int129Minor allele frequency- A:0.17NS EA NA WA CSA 3222
    rs47504381,2
    		C,F,A--6468622(+) AAATGT/CTCCAG 2 -- int17Minor allele frequency- C:0.44NA CSA WA EA 366
    rs79100231,2
    		C,F--6468630(+) CAGCAC/TACCTG 2 -- int16Minor allele frequency- T:0.16WA NA EA 364
    rs770799881,2
    		--6468706(+) AGCCAC/TGTGAT 2 -- int10--------
    rs118149141,2
    		C,F,H--6468710(+) ATGTGA/TTGAGG 2 -- int18Minor allele frequency- T:0.07NS EA NA WA 546
    rs6487311,2
    		C,F,O,A,H--6468731(+) ACTCCG/AAATAT 2 -- int128Minor allele frequency- A:0.17NS EA NA WA CSA 2780
    rs1861439641,2
    		--6468807(+) CTACTC/TCTGCC 2 -- int10--------
    rs122483581,2
    		C,F--6468843(+) taggcT/Ccccgc 2 -- int12Minor allele frequency- C:0.33CSA 3

    HapMap Linkage Disequilibrium report for PRKCQ (6469105 - 6622263 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 5 variations for PRKCQ:    About this table     
    Variant IDTypeSubtypePubMed ID
    nsv5698CNV Insertion18451855
    nsv507533CNV Insertion20534489
    nsv515823CNV Loss19592680
    nsv5687CNV Loss18451855
    nsv7198OTHER Inversion18451855

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    Disorders / Diseases
    for PRKCQ gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    PRKCQ for disorders           About GeneDecksing

    OMIM gene information: 600448    OMIM disorders: --

    20/31 diseases for PRKCQ (see all 31):    About MalaCards
    gastrointestinal stromal tumor    common variable immunodeficiency    wegener's granulomatosis    fatty liver disease
    measles    encephalomyelitis    narcolepsy    celiac disease
    liver disease    cholera    huntington's disease    type 1 diabetes
    t-cell leukemia    insulin resistance    oral squamous cell carcinoma    rheumatoid arthritis
    arthritis    alcoholism    glioblastoma    sarcoma


    Congresses - knowledge worth sharing:  
    Alzheimer's & Parkinson's Diseases Congress (ADPD) 18 - 22 March 2015

    6 Novoseek inferred disease relationships for PRKCQ gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    gastrointestinal stromal tumor 61 3 18521081 (1), 15217944 (1), 15289315 (1)
    leukemia t-cell 45.1 2 12188914 (1), 11274147 (1)
    leukemia 1.78 1 10222061 (1)
    inflammation 0 1 14704736 (1)
    tumors 0 4 18521081 (1), 20096441 (1), 15217944 (1)
    sarcoma 0 1 15217944 (1)

    Genetic Association Database (GAD): PRKCQ
    Human Genome Epidemiology (HuGE) Navigator: PRKCQ (27 documents)

    Export disorders for PRKCQ gene to outside databases

    Publications
    for PRKCQ gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PRKCQ gene, integrated from 9 sources (see all 271):
    (articles sorted by number of sources associating them with PRKCQ)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning and characterization of PKC theta, a novel member of the protein kinase C (PKC) gene family expressed predominantly in hematopoietic cells. (PubMed id 8444877)1, 2, 3 Baier G.... Altman A. (1993)
    2. Protein kinase C Theta inhibits insulin signaling by phosphorylating IRS1 at Ser(1101). (PubMed id 15364919)1, 2, 9 Li Y....Polakiewicz R.D. (2004)
    3. Phosphorylation of the protein kinase C-theta activation loop and hydrophobic motif regulates its kinase activity, but only activation loop phosphorylation is critical to in vivo nuclear-factor-kappaB induction. (PubMed id 11772397)1, 2, 9 Liu Y....Shaw S. (2002)
    4. Protein kinase C-theta mediates a selective T cell survival signal via phosphorylation of BAD. (PubMed id 11342610)1, 2, 9 Villalba M....Altman A. (2001)
    5. Regulation of protein kinase Ctheta function during T cell activation by Lck-mediated tyrosine phosphorylation. (PubMed id 10652356)1, 2, 9 Liu Y....Altman A. (2000)
    6. Protein kinase C-theta in platelet activation. (PubMed id 21944869)1, 2 Cohen S.... Isakov N. (2011)
    7. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1, 4 Rose J.E....Uhl G.R. (2010)
    8. Overlap of disease susceptibility loci for rheumatoid arthritis and juvenile idiopathic arthritis. (PubMed id 19674979)1, 4 Hinks A....Packham J. (2010)
    9. A functionally relevant IRF5 haplotype is associated with reduced risk to Wegener's granulomatosis. (PubMed id 20049410)1, 4 Wieczorek S....Epplen J.T. (2010)
    10. Investigation of potential non-HLA rheumatoid arthrit is susceptibility loci in a European cohort increases the evidence for nine mar kers. (PubMed id 20498205)1, 4 Plant D....Worthington J. (2010)

    External Searches for PRKCQ gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  
      Query String
    		PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    Genome Databases showing PRKCQ gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5588 HGNC: 9410 AceView: PRKCQ Ensembl:ENSG00000065675 euGenes: HUgn5588
    ECgene: PRKCQ Kegg: 5588 H-InvDB: PRKCQ

    Other Databases showing PRKCQ gene

    (According to HUGE)
    About This Section
    		   --

    Specialized Databases showing PRKCQ gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PRKCQ Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for PRKCQ Genetics and Cytogenetics in Oncology and Haematology

    Intellectual Property
    for PRKCQ gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    		Patent Information for PRKCQ gene:
    Search GeneIP for patents involving PRKCQ

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 4 Nov 2013 , 7 Nov 2013

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