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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PRKCB Gene

protein-coding   GIFtS: 68
GCID: GC16P023847

protein kinase C, beta

(Previous names: protein kinase C, beta 1 )
(Previous symbols: PRKCB2, PKCB, PRKCB1)
 Explore 88 diseases affiliated with
PRKCB via our new
 Human Malady Compendium 
Biological research products
for PRKCB
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Protein Kinase C, Beta1 2     EC 2.7.11.133 8
PKCB1 2 3 5     Protein Kinase C, Beta 11
PRKCB11 2 3 5     Protein Kinase C Beta Type2
PRKCB21 2     Protein Kinase C, Beta 1 Polypeptide2
PKC-B2 3     EC 2.7.118
PKC-Beta1     

External Ids:    HGNC: 93951   Entrez Gene: 55792   Ensembl: ENSG000001665017   OMIM: 1769705   UniProtKB: P057713   

Export aliases for PRKCB gene to outside databases

Previous GC identifers: GC16P023755 GC16P021938


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PRKCB:
Protein kinase C (PKC) is a family of serine- and threonine-specific protein kinases that can be activated by calcium
and second messenger diacylglycerol. PKC family members phosphorylate a wide variety of protein targets and are known
to be involved in diverse cellular signaling pathways. PKC family members also serve as major receptors for phorbol
esters, a class of tumor promoters. Each member of the PKC family has a specific expression profile and is believed to
play a distinct role in cells. The protein encoded by this gene is one of the PKC family members. This protein kinase
has been reported to be involved in many different cellular functions, such as B cell activation, apoptosis induction,
endothelial cell proliferation, and intestinal sugar absorption. Studies in mice also suggest that this kinase may
also regulate neuronal functions and correlate fear-induced conflict behavior after stress. Alternatively spliced
transcript variants encoding distinct isoforms have been reported. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: KPCB_HUMAN, P05771
Function: Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase involved
in various cellular processes such as regulation of the B-cell receptor (BCR) signalosome, oxidative stress-induced
apoptosis, androgen receptor-dependent transcription regulation, insulin signaling and endothelial cells
proliferation. Plays a key role in B-cell activation by regulating BCR-induced NF-kappa-B activation. Mediates the
activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11/CARMA1 at 'Ser-559',
'Ser-644' and 'Ser-652'. Phosphorylation induces CARD11/CARMA1 association with lipid rafts and recruitment of the
BCL10-MALT1 complex as well as MAP3K7/TAK1, which then activates IKK complex, resulting in nuclear translocation and
activation of NFKB1. Plays a direct role in the negative feedback regulation of the BCR signaling, by down-modulating
BTK function via direct phosphorylation of BTK at 'Ser-180', which results in the alteration of BTK plasma membrane
localization and in turn inhibition of BTK activity. Involved in apoptosis following oxidative damage: in case of
oxidative conditions, specifically phosphorylates 'Ser-36' of isoform p66Shc of SHC1, leading to mitochondrial
accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen
receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating
phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation that
prevents demethylation of histone H3 'Lys-4' (H3K4me) by LSD1/KDM1A. In insulin signaling, may function downstream of
IRS1 in muscle cells and mediate insulin-dependent DNA synthesis through the RAF1-MAPK/ERK signaling cascade. May
participate in the regulation of glucose transport in adipocytes by negatively modulating the insulin-stimulated
translocation of the glucose transporter SLC2A4/GLUT4. Under high glucose in pancreatic beta-cells, is probably
involved in the inhibition of the insulin gene transcription, via regulation of MYC expression. In endothelial cells,
activation of PRKCB induces increased phosphorylation of RB1, increased VEGFA-induced cell proliferation, and inhibits
PI3K/AKT-dependent nitric oxide synthase (NOS3/eNOS) regulation by insulin, which causes endothelial dysfunction. Also
involved in triglyceride homeostasis (By similarity)

Gene Wiki entry for PRKCB (PRKCB1)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000016.9  NC_018927.1  NT_010393.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PRKCB gene promoter:
         AML1a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPRKCB promoter sequence
   Search SABiosciences Chromatin IP Primers for PRKCB

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PRKCB


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 16p11.2   Ensembl cytogenetic band:  16p12.2   HGNC cytogenetic band: 16p12

PRKCB Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PRKCB gene location

GeneLoc information about chromosome 16         GeneLoc Exon Structure

GeneLoc location for GC16P023847:  view genomic region     (about GC identifiers)

Start:
23,847,300 bp from pter      End:
24,231,932 bp from pter
Size:
384,633 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: KPCB_HUMAN, P05771 (See protein sequence)
Recommended Name: Protein kinase C beta type  
Size: 671 amino acids; 76869 Da
Cofactor: Binds 3 calcium ions per subunit. The ions are bound to the C2 domain (By similarity)
Subunit: Interacts with PDK1 (By similarity). Interacts in vitro with PRKCBP1. Interacts with PHLPP1 and PHLPP2; both
proteins mediate its dephosphorylation. Interacts with KDM1A/LSD1, PKN1 and ANDR
Subcellular location: Cytoplasm (By similarity). Nucleus. Membrane; Peripheral membrane protein (By similarity)
1 PDB 3D structure from and Proteopedia for PRKCB:
2I0E (3D)    
Secondary accessions: C5IFJ8 D3DWF5 O43744 P05127 Q15138 Q93060 Q9UE49 Q9UE50 Q9UEH8 Q9UJ30 Q9UJ33
Alternative splicing: 2 isoforms:  P05771-1   P05771-2   (Contains a phosphothreonine at position 641. Contains a phosphoserine at position 660)

Explore the universe of human proteins at neXtProt for PRKCB: NX_P05771

Post-translational modifications:

  • Phosphorylation on Thr-500 within the activation loop renders it competent to autophosphorylate. Subsequent
  • autophosphorylation of Thr-642 maintains catalytic competence, and autophosphorylation on Ser-661 appears to release
    the kinase into the cytosol. Autophosphorylation on other sites i.e. in the N-terminal and hinge regions have no
    effect on enzyme activity. Phosphorylation at Tyr-662 by SYK induces binding with GRB2 and contributes to the
    activation of MAPK/ERK signaling cascade (By similarity)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P05771

  • 4/50 DME Specific Peptides for PRKCB (P05771) (see all 50)
     VNGGDLM  VRDAKNL  FYAAEIA  WGFGKQG 

    PRKCB Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_002729.2  NP_997700.1  

    ENSEMBL proteins: 
     ENSP00000318315   ENSP00000305355   ENSP00000454428   ENSP00000459227   ENSP00000457980  
     ENSP00000458564  
    Reactome Protein details: P05771
    Human Recombinant Protein Products: 
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    Enzo Life Sciences proteins for PRKCB
    OriGene Purified Proteins (see all 2): PRKCB
    OriGene Protein Over-expression Lysate (see all 3): PRKCB
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    Novus Biologicals PRKCB Proteins
    Novus Biologicals PRKCB Lysates
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    ProSpec Recombinant Protein for PRKCB
    Browse Proteins at Uscn

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005737cytoplasm IDA15632189
    GO:0005829cytosol TAS--
    GO:0005886plasma membrane TAS--


    PRKCB for ontologies           About GeneDecksing



    PRKCB Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of PRKCB
    R&D Systems Antibodies for PRKCB (PKC beta 2, PKC beta 1)
    Cell Signaling Technology (CST) Antibodies for PRKCB (PKCB iso2, PKCB)
    OriGene Antibodies (see all 3): PRKCB
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    OriGene Custom Immunoassay Development
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    GenScript PRKCB-Activity-based Kinase Assay for Compound Screening
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PRKCB for domains           About GeneDecksing

    5/14 InterPro domains/families (see all 14):
     IPR017441 Protein_kinase_ATP_BS
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR020454 DAG/PE-bd
     IPR011009 Kinase-like_dom
     IPR017892 Pkinase_C

    Graphical View of Domain Structure for InterPro Entry P05771

    ProtoNet protein and cluster: P05771

    3 Blocks protein families:
    IPB000008 C2 domain
    IPB000961 Protein kinase C-terminal domain
    IPB002219 Protein kinase C


    UniProtKB/Swiss-Prot: KPCB_HUMAN, P05771
    Similarity: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily
    Similarity: Contains 1 AGC-kinase C-terminal domain
    Similarity: Contains 1 C2 domain
    Similarity: Contains 2 phorbol-ester/DAG-type zinc fingers
    Similarity: Contains 1 protein kinase domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: KPCB_HUMAN, P05771
    Function: Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase involved
    in various cellular processes such as regulation of the B-cell receptor (BCR) signalosome, oxidative stress-induced
    apoptosis, androgen receptor-dependent transcription regulation, insulin signaling and endothelial cells
    proliferation. Plays a key role in B-cell activation by regulating BCR-induced NF-kappa-B activation. Mediates the
    activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11/CARMA1 at 'Ser-559',
    'Ser-644' and 'Ser-652'. Phosphorylation induces CARD11/CARMA1 association with lipid rafts and recruitment of the
    BCL10-MALT1 complex as well as MAP3K7/TAK1, which then activates IKK complex, resulting in nuclear translocation and
    activation of NFKB1. Plays a direct role in the negative feedback regulation of the BCR signaling, by down-modulating
    BTK function via direct phosphorylation of BTK at 'Ser-180', which results in the alteration of BTK plasma membrane
    localization and in turn inhibition of BTK activity. Involved in apoptosis following oxidative damage: in case of
    oxidative conditions, specifically phosphorylates 'Ser-36' of isoform p66Shc of SHC1, leading to mitochondrial
    accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen
    receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating
    phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation that
    prevents demethylation of histone H3 'Lys-4' (H3K4me) by LSD1/KDM1A. In insulin signaling, may function downstream of
    IRS1 in muscle cells and mediate insulin-dependent DNA synthesis through the RAF1-MAPK/ERK signaling cascade. May
    participate in the regulation of glucose transport in adipocytes by negatively modulating the insulin-stimulated
    translocation of the glucose transporter SLC2A4/GLUT4. Under high glucose in pancreatic beta-cells, is probably
    involved in the inhibition of the insulin gene transcription, via regulation of MYC expression. In endothelial cells,
    activation of PRKCB induces increased phosphorylation of RB1, increased VEGFA-induced cell proliferation, and inhibits
    PI3K/AKT-dependent nitric oxide synthase (NOS3/eNOS) regulation by insulin, which causes endothelial dysfunction. Also
    involved in triglyceride homeostasis (By similarity)
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Classical (or conventional) PKCs (PRKCA, PRKCB and PRKCG) are activated by calcium and
    diacylglycerol (DAG) in the presence of phosphatidylserine. Three specific sites; Thr-500 (activation loop of the
    kinase domain), Thr-642 (turn motif) and Ser-661 (hydrophobic region), need to be phosphorylated for its full
    activation. Specifically inhibited by enzastaurin (LY317615)

    Enzyme Numbers (IUBMB): EC 2.7.11.131 2 EC 2.7.112

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PRKCB
    8/9 QIAGEN miScript miRNA Assays for microRNAs that regulate PRKCB (see all 9):
    hsa-miR-203 hsa-miR-3607-3p hsa-miR-548am hsa-miR-27a hsa-miR-1179 hsa-miR-7 hsa-miR-550b hsa-miR-548x
    SwitchGear 3'UTR luciferase reporter plasmidPRKCB 3' UTR sequence
    Inhib. RNA
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    Clone
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    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): PRKCB (NM_002738)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PRKCB 

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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRKCB

    Gene Ontology (GO): 5/12 molecular function terms (GO ID links to tree view) (see all 12):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003682chromatin binding IDA--
    GO:0004674protein serine/threonine kinase activity TAS--
    GO:0004697protein kinase C activity IEA--
    GO:0005080protein kinase C binding IPI--
    GO:0005246calcium channel regulator activity IEA--


    PRKCB for ontologies           About GeneDecksing


    4 GenomeRNAi human phenotypes for PRKCB:
     Decreased focal adhesion (FA)   Decreased substrate adherent c  Increased cell death HMECs cel  Increased cell number in G2M,  

    Animal Models:
         7 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Prkcb):
     behavior/neurological  cardiovascular system  cellular  hematopoietic system  homeostasis/metabolism 
     immune system  nervous system 

    PRKCB for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/82 super-pathways (see all 82About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Wnt Signaling Pathway
    Wnt Signaling Pathway1.00
    Wnt signaling pathway0.30
    Wnt Signaling Pathway and Pluripotency0.55
    Wnt Signaling Pathway NetPath0.22
    Wnt Signaling Pathway0.33
    2Development VEGF signaling via VEGFR2 - generic cascades
    Development VEGF signaling via VEGFR2 - generic cascades1.00
    Development_VEGF signaling and activation0.75
    Development VEGF signaling and activation0.75
    Development_VEGF signaling via VEGFR2 - generic cascades0.51
    3Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    4Glutamate Binding, Activation of AMPA Receptors and Synaptic Plasticity
    Trafficking of AMPA receptors1.00
    Trafficking of GluR2-containing AMPA receptors0.53
    Glutamate Binding, Activation of AMPA Receptors and Synaptic Plasticity1.00
    5Transmission across Chemical Synapses
    Transmission across Chemical Synapses1.00
    Neuronal System0.67
    Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell0.72

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    5/14 EMD Millipore Pathways for PRKCB (see all 14)
        Transcription Transcription factor Tubby signaling pathways
    Development VEGF signaling and activation
    Development Angiotensin signaling via beta-Arrestin
    Signal transduction Calcium signaling
    Signal transduction cAMP signaling

    2 R&D Systems Pathways for PRKCB
        Wnt Signaling Pathway
    Adipocytokines & Insulin Signaling


    1 Cell Signaling Technology (CST) Pathway for PRKCB
        Ca, cAMP and Lipid Signaling

    3 Tocris Bioscience Pathways for PRKCB
        Insulin Pathway
    VEGF Pathway
    MAPK Pathway

    5/15 GeneGo (Thomson Reuters) Pathways for PRKCB (see all 15)
        Development VEGF signaling via VEGFR2 - generic cascades
    Development FGF-family signaling
    Signal transduction cAMP signaling
    Development EGFR signaling pathway
    Development Angiotensin signaling via beta-Arrestin

    5/25 BioSystems Pathways for PRKCB (see all 25
        Calcium Regulation in the Cardiac Cell
    Wnt Signaling Pathway
    Oncostatin M Signaling Pathway
    Myometrial Relaxation and Contraction Pathways
    MAPK signaling pathway

    5/20        Reactome Pathways for PRKCB (see all 20)
        Transmission across Chemical Synapses
    Activation of NF-kappaB in B Cells
    Neuronal System
    Response to elevated platelet cytosolic Ca2+
    G alpha (z) signalling events

    4 PharmGKB Pathways for PRKCB
        Beta-agonist/Beta-blocker Pathway, Pharmacodynamics
    EGFR Inhibitor Pathway, Pharmacodynamics
    Proton Pump Inhibitor Pathway, Pharmacodynamics
    VEGF Signaling Pathway

    5/36         Kegg Pathways  (Kegg details for PRKCB) (see all 36):
        MAPK signaling pathway
    ErbB signaling pathway
    Calcium signaling pathway
    Chemokine signaling pathway
    Phosphatidylinositol signaling system


    PRKCB for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PRKCB

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/219 Interacting proteins for PRKCB (P057712, 3 ENSP000003053554) via UniProtKB, MINT, STRING, and/or I2D (see all 219)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H3AP684313, ENSP000003502754I2D: score=1 STRING: ENSP00000350275
    HIST1H3BP684313I2D: score=1 
    HIST1H3CP684313I2D: score=1 
    HIST1H3DP684313I2D: score=1 
    HIST1H3EP684313I2D: score=1 
    About this table

    Gene Ontology (GO): 5/23 biological process terms (GO ID links to tree view) (see all 23):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006357regulation of transcription from RNA polymerase II promoter IMP--
    GO:0006468protein phosphorylation TAS3755548
    GO:0006816calcium ion transport IEA--
    GO:0006874cellular calcium ion homeostasis IEA--


    PRKCB for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    PRKCB for compounds           About GeneDecksing

    EMD Millipore small molecules for PRKCB:
    Small Molecule - inhibitor
    Enzo Life Sciences drugs & compounds for PRKCB

    Compounds for PRKCB available from Tocris Bioscience    About this table
    CompoundAction CAS #
    CGP 53353Selective inhibitor of PKCbetaII[145915-60-2]
    [Glu27]-PKC (19-36)Inactive control peptide for PKC (19-36) (Cat. No. 4058)[309247-49-2]
    Go 6976Potent protein kinase C inhibitor; selective for alpha and beta isozymes[136194-77-9]
    GF 109203XProtein kinase C inhibitor[133052-90-1]
    PKC (19-36)Pseudosubstrate peptide; inhibitor of PKC[113731-96-7]

    10/846 HMDB Compounds for PRKCB (see all 846)    About this table
    CompoundSynonyms CAS #PubMed Ids
    DG(16:0e/18:0/0:0)2-Octadecanoyl-1-hexadecyl-sn-glycerol (see all 2)--12486725
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    CalciumCa (see all 2)7440-70-2--
    DG(14:0/14:0/0:0)DAG(14:0/14:0) (see all 9)----
    DG(14:0/14:1(9Z)/0:0)DAG(14:0/14:1) (see all 15)----
    DG(14:0/15:0/0:0)Diacylglycerol(29:0) (see all 9)----
    DG(14:0/16:0/0:0)DAG(30:0) (see all 9)----
    DG(14:0/16:1(9Z)/0:0)DG(30:1) (see all 15)----
    DG(14:0/18:0/0:0)DG(14:0/18:0) (see all 9)----

    2 DrugBank Compounds for PRKCB    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Vitamin Ealpha-Tocopherol (see all 2)59-02-9target--17139284 17016423 15184978 11850093 10644549
    O-PhosphoethanolamineColamine phosphoric acid (see all 2)1071-23-4target--17139284 17016423 10592235

    10/65 Novoseek chemical compound relationships for PRKCB gene (see all 65)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ruboxistaurin 95.7 34 16384948 (3), 16307493 (2), 19825373 (2), 16249561 (1) (see all 23)
    ly333531 94.2 23 12540629 (2), 15067074 (1), 10452527 (1), 11356718 (1) (see all 16)
    ly317615 91.8 10 19112601 (1), 18462865 (1), 14593497 (1), 17766700 (1) (see all 6)
    hispidin 81.8 4 16374459 (1), 16936115 (1), 16441551 (1), 12566375 (1)
    pkcs 79.1 7 19112601 (1), 9117107 (1), 18783200 (1), 15591124 (1) (see all 6)
    go 6976 77.6 3 15591124 (1), 16441551 (1), 9497487 (1)
    12-deoxyphorbol-13-phenylacetate-20-acetate 69.3 1 8308000 (1)
    bisindolylmaleimide 68.6 4 10618482 (1), 14962104 (1)
    gf 109203x 67.6 8 14578299 (1), 19077250 (1), 16285992 (1), 17901075 (1) (see all 5)
    phorbol 66.2 10 8308000 (2), 11707282 (1), 8694856 (1), 9413940 (1) (see all 9)

    Search CenterWatch for drugs/clinical trials and news about PRKCB / KPCB 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PRKCB gene (2 alternative transcripts): 
    NM_002738.6  NM_212535.2  

    Unigene Cluster for PRKCB:

    Protein kinase C, beta
    Hs.460355  [show with all ESTs]
    Unigene Representative Sequence: NM_002738
    10 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000321728(uc002dmd.3) ENST00000303531(uc002dme.3) ENST00000498058
    ENST00000498739 ENST00000486868 ENST00000482000 ENST00000472066 ENST00000463752
    ENST00000487674 ENST00000466124

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    hsa-miR-203 hsa-miR-3607-3p hsa-miR-548am hsa-miR-27a hsa-miR-1179 hsa-miR-7 hsa-miR-550b hsa-miR-548x
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    Additional cDNA sequence: 

    AJ002788.1 AK057555.1 AK123381.1 AL833252.1 BC036472.1 BC045175.2 M13975.1 X06318.1 
    X07109.1 

    13 DOTS entries:

    DT.215913  DT.215912  DT.102834600  DT.120707986  DT.75186984  DT.120707950  DT.120707913  DT.95289505 
    DT.86846418  DT.92325932  DT.97801822  DT.120708022  DT.95314865 

    24/313 AceView cDNA sequences (see all 313):

    AW002912 Z45874 NM_212535 AW575552 AA262174 AW373276 Z42558 F05187 
    BM931124 BU730067 N50566 F06702 AA989561 BP367288 BU733787 F02882 
    BE676169 BX493287 AW608634 AI436426 AV728862 AI381600 AA810597 AW968002 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PRKCB expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    PRKCB expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    HeartAtrioventricular CanalAtrioventricular Canal CellsMyocardium
    Gut TubeVentral Foregut EndodermGut Tube
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    CyT49 (Embryonic Stem Cell)Early Embryo, Inner Cell Mass
    Line H9 (WA09) (Embryonic Stem Cell)Early Embryo, Inner Cell Mass

    See PRKCB Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PRKCB

    SOURCE GeneReport for Unigene cluster: Hs.460355
        SABiosciences Expression via Pathway-Focused PCR Arrays including PRKCB (see all 12): 
              mTOR Signaling in human mouse rat
              Leukemia in human mouse rat
              Alzheimer's Disease in human mouse rat
              VEGF Signaling in human mouse rat
              Diabetes in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for PRKCB gene from 5/22 species (see all 22)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves PRKCB1 protein kinase C, beta 84.01(n)
    95.27(a)
      416567  XM_414868.3  XP_414868.3 
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.340272 Xenopus laevis transcribed sequence with moderate similarity more 82.25(n)    BJ069178.1 
    zebrafish
    (Danio rerio)
    Actinopterygii zgc635912 similar to protein kinase C, beta 80.58(n)   393953  BC055154.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Pkc53E6
    inaC6
    inactivation no afterpotential C
    63(a)
    49(a)
    many ↔ many
    many ↔ many
    2R(12812160-12832631)
    2R(12786088-12789083)
    worm
    (Caenorhabditis elegans)
    Secernentea pkc-21 Protein PKC-2 63.91(n)
    68.56(a)
      181166  NM_001029347.1  NP_001024518.1 


    ENSEMBL Gene Tree for PRKCB (if available)
    TreeFam Gene Tree for PRKCB (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PRKCB gene
    PRKCQ2  PRKCH2  PRKCI2  PRKCE2  PKN12  PRKCA2  PRKCD2  PRKCZ2  
    PKN32  PRKCG2  PKN22  
    18/46 SIMAP similar genes for PRKCB using alignment to 4 protein entries:     KPCB_HUMAN (see all proteins) (see all similar genes):
    PRKCA    PRKD1    PRKCG    PRKCZ    PRKCE    KIN27
    PRKCI    PRKACB    PRKACA    AKT3    RASA4    AKT1
    SGK2    RPS6KA3    RPS6KA5    RPS6KB1    CHR11SYT    PKN1

    PRKCB for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/7434 NCBI SNPs in PRKCB are shown (see all 7434    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 16 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs37601061,2
    C,F,H,--21936777(-) AAAGGG/AGTGAA 2 -- us2k118Minor allele frequency- A:0.15NS EA NA WA 1984
    rs727779101,2
    C,F,--21936841(+) TGACTG/TTGGGT 2 -- us2k11Minor allele frequency- T:0.02NA 120
    rs772351901,2
    --21937260(+) CAGGGC/TGCTAA 2 -- us2k11Minor allele frequency- T:0.01WA 118
    rs802548951,2
    --21937284(+) ACACAC/TTGTAG 2 -- us2k10--------
    rs793152781,2
    --21937305(+) CCCTTT/GCAGTT 2 -- us2k11Minor allele frequency- G:0.01EA 120
    rs118626611,2
    C,F,H,--21937446(+) GGCACC/TTGGAG 2 -- us2k116Minor allele frequency- T:0.03NS EA NA 1938
    rs790501461,2
    --21937805(+) ATGTGC/TGTGTA 2 -- us2k10--------
    rs116452391,2
    C,F,H,--21938043(+) GGGGCC/GGAGGA 2 -- us2k16Minor allele frequency- G:0.25NA CSA WA EA 363
    rs753172421,2
    --21938206(+) CGCGAA/TGCAAA 2 -- us2k10--------
    rs783062641,2
    C,--21938828(+) GTCCCC/TACCCT 2 -- int12Minor allele frequency- T:0.15WA 120

    HapMap Linkage Disequilibrium report for PRKCB (23847300 - 24097300 bp, first 250kb of PRKCB)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 15 variations for PRKCB
         8 CNVs: 88014 66961 88016 88015 47954 4935 66960 77229
         7 Indels: 45411 61499 25629 102237 40137 41639 45410
    Human Gene Mutation Database (HGMD): PRKCB

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PRKCB for disorders           About GeneDecksing

    OMIM gene information: 176970    OMIM disorders: --

    20/88 diseases for PRKCB (see all 88):    About MalaCards
    diffuse large b-cell lymphoma    diabetic macular edema    b-cell lymphomas    waldenstrom macroglobulinemia
    malignant pleural mesothelioma    familial adenomatous polyposis    type 2 diabetes mellitus    diabetes mellitus
    uterine fibroid    autism spectrum disorder    spina bifida    membranous glomerulonephritis
    insulin resistance    diabetic retinopathy    mantle cell lymphoma    diabetic neuropathy
    systemic lupus erythematosus    macroglobulinemia    myotonic dystrophy    aortic aneurysm

    10/47 Novoseek disease relationships for PRKCB gene (see all 47)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    diabetic retinopathy 63.3 13 14737743 (1), 17472415 (1), 15209756 (1), 16200860 (1) (see all 12)
    diabetic macular edema 60.5 2 16186374 (1), 19951615 (1)
    hyperglycemia 56.2 10 12540629 (2), 20184965 (1), 14986905 (1), 17494892 (1) (see all 8)
    diabetic nephropathies 52.2 12 12874455 (4), 12540629 (2), 17693752 (1), 18485142 (1) (see all 7)
    myeloid leukemia 46.2 3 9858570 (1), 10438532 (1), 11746831 (1)
    retinopathy 41.5 4 20431074 (1), 20141354 (1), 12507628 (1)
    promyelocytic leukemia 40.9 1 1445803 (1)
    macular edema 40.3 1 12507628 (1)
    microangiopathy diabetic 39.6 4 14757134 (2), 17160912 (1), 11304414 (1)
    blindness 34.7 1 16989901 (1)

    Human Genome Epidemiology (HuGE) Navigator: PRKCB (16 documents)

    Export disorders for PRKCB gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PRKCB gene, integrated from 9 sources (see all 619):
    (articles sorted by number of sources associating them with PRKCB)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Nucleotide sequence of the 3' portion of a human gene for protein kinase C beta-I/beta-II. (PubMed id 3658678)1, 2, 3 Kubo K.... Suzuki K. (1987)
    2. Autoregulation of cloned human protein kinase C beta and gamma gene promoters in U937 cells. (PubMed id 7880442)1, 2, 9 Mahajna J.... Haley J. (1995)
    3. Cloning and characterization of the major promoter of the human protein kinase C beta gene. Regulation by phorbol esters. (PubMed id 1400396)1, 2, 9 Obeid L.M.... Hannun Y.A. (1992)
    4. Phosphorylation of histone H3T6 by PKCbeta(I) control s demethylation at histone H3K4. (PubMed id 20228790)1, 2 Metzger E....SchA1le R. (2010)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    6. Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. (PubMed id 12665801)1, 2 Gevaert K.... Vandekerckhove J. (2003)
    7. PKCbeta modulates antigen receptor signaling via regulation of Btk membrane localization. (PubMed id 11598012)1, 2 Kang S.W....Rawlings D.J. (2001)
    8. Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. (PubMed id 10493829)1, 2 Loftus B.J.... Adams M.D. (1999)
    9. Positive and negative regulation of the transcription of the human protein kinase C beta gene. (PubMed id 1556124)1, 2 Niino Y.S.... Suzuki K. (1992)
    10. Primary structures of human protein kinase C beta I and beta II differ only in their C-terminal sequences. (PubMed id 3666134)1, 2 Kubo K.... Suzuki K. (1987)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5579 HGNC: 9395 AceView: PRKCB1 Ensembl:ENSG00000166501 euGenes: HUgn5579
    ECgene: PRKCB Kegg: 5579 H-InvDB: PRKCB

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PRKCB Pharmacogenomics, SNPs, Pathways
    NIEHS-SNPshttp://egp.gs.washington.edu/data/prkcb1/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PRKCB gene:
    Search GeneIP for patents involving PRKCB

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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