Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PRKAG3 Gene

protein-coding   GIFtS: 60
GCID: GC02M219651

protein kinase, AMP-activated, gamma 3 non-catalytic subunit

 Explore 4 diseases affiliated with
PRKAG3 via our new
 Human Malady Compendium 
Biological research products
for PRKAG3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Protein Kinase, AMP-Activated, Gamma 3 Non-Catalytic Subunit1 2     5'-AMP-Activated Protein Kinase Subunit Gamma-32
AMPKG32 3     5'-AMP-Activated Protein Kinase, Gamma-3 Subunit2
AMPK Gamma32 3     AMPK Gamma-3 Chain2
AMPK Subunit Gamma-32 3     

External Ids:    HGNC: 93871   Entrez Gene: 536322   Ensembl: ENSG000001155927   OMIM: 6049765   UniProtKB: Q9UGI93   

Export aliases for PRKAG3 gene to outside databases

Previous GC identifers: GC02M217702 GC02M218408 GC02M219889 GC02M219512 GC02M219395 GC02M211540


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PRKAG3:
The protein encoded by this gene is a regulatory subunit of the AMP-activated protein kinase (AMPK). AMPK is a
heterotrimer consisting of an alpha catalytic subunit, and non-catalytic beta and gamma subunits. AMPK is an important
energy-sensing enzyme that monitors cellular energy status. In response to cellular metabolic stresses, AMPK is
activated, and thus phosphorylates and inactivates acetyl-CoA carboxylase (ACC) and beta-hydroxy
beta-methylglutaryl-CoA reductase (HMGCR), key enzymes involved in regulating de novo biosynthesis of fatty acid and
cholesterol. This subunit is one of the gamma regulatory subunits of AMPK. It is dominantly expressed in skeletal
muscle. Studies of the pig counterpart suggest that this subunit may play a key role in the regulation of energy
metabolism in skeletal muscle. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: AAKG3_HUMAN, Q9UGI9
Function: AMP/ATP-binding subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a
key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK
activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid
biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and
by longer-term effects via phosphorylation of transcription regulators. Also acts as a regulator of cellular polarity
by remodeling the actin cytoskeleton; probably by indirectly activating myosin. Gamma non-catalytic subunit mediates
binding to AMP, ADP and ATP, leading to activate or inhibit AMPK: AMP-binding results in allosteric activation of
alpha catalytic subunit (PRKAA1 or PRKAA2) both by inducing phosphorylation and preventing dephosphorylation of
catalytic subunits. ADP also stimulates phosphorylation, without stimulating already phosphorylated catalytic subunit.
ATP promotes dephosphorylation of catalytic subunit, rendering the AMPK enzyme inactive

Gene Wiki entry for PRKAG3


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_005403.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PRKAG3 gene promoter:
         AML1a   Ik-2   Lmo2   MyoD   LCR-F1   Roaz   ATF6   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPRKAG3 promoter sequence
   Search SABiosciences Chromatin IP Primers for PRKAG3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PRKAG3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q35   Ensembl cytogenetic band:  2q35   HGNC cytogenetic band: 2q35

PRKAG3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PRKAG3 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M219651:  view genomic region     (about GC identifiers)

Start:
219,687,106 bp from pter      End:
219,696,809 bp from pter
Size:
9,704 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: AAKG3_HUMAN, Q9UGI9 (See protein sequence)
Recommended Name: 5'-AMP-activated protein kinase subunit gamma-3  
Size: 489 amino acids; 54258 Da
Subunit: AMPK is a heterotrimer of an alpha catalytic subunit (PRKAA1 or PRKAA2), a beta (PRKAB1 or PRKAB2) and a gamma
non-catalytic subunits (PRKAG1, PRKAG2 or PRKAG3). Interacts with FNIP1 and FNIP2 (By similarity)
Secondary accessions: Q4QQG8 Q4V779 Q9NRL1
Alternative splicing: 2 isoforms:  Q9UGI9-1   Q9UGI9-2   

Explore the universe of human proteins at neXtProt for PRKAG3: NX_Q9UGI9

Post-translational modifications:

  • Phosphorylated by ULK1; leading to negatively regulate AMPK activity and suggesting the existence of a regulatory
  • feedback loop between ULK1 and AMPK1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9UGI9

  • PRKAG3 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_059127.2  
    ENSEMBL proteins: 
     ENSP00000233944   ENSP00000436068   ENSP00000419272   ENSP00000416100   ENSP00000397133  
     ENSP00000444536   ENSP00000375947  
    Reactome Protein details: Q9UGI9
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: PRKAG3
    OriGene Custom Protein Services for PRKAG3 
    GenScript Custom Purified and Recombinant Proteins Services for PRKAG3
    Novus Biologicals PRKAG3 Protein
    Novus Biologicals PRKAG3 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS--
    GO:0031588AMP-activated protein kinase complex IEA--


    PRKAG3 for ontologies           About GeneDecksing



    PRKAG3 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Cell Signaling Technology (CST) Antibodies for PRKAG3  (AMPKG3)
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for PRKAG3 
    GenScript Superior Antibodies for PRKAG3
    Novus Biologicals PRKAG3 Antibodies
    Search for Antibodies for PRKAG3 at Abcam  
    Browse Antibodies at Uscn
    ThermoFisher Antibodies for PRKAG3

    Assay Products for PRKAG3: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript PRKAG3-Activity-based Kinase Assay for Compound Screening
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PRKAG3 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR000644 Cysta_beta_synth_core

    Graphical View of Domain Structure for InterPro Entry Q9UGI9

    ProtoNet protein and cluster: Q9UGI9

    1 Blocks protein family: IPB000644 CBS domain

    UniProtKB/Swiss-Prot: AAKG3_HUMAN, Q9UGI9
    Domain: The AMPK pseudosubstrate motif resembles the sequence around sites phosphorylated on target proteins of AMPK,
    except the presence of a non-phosphorylatable residue in place of Ser. In the absence of AMP this pseudosubstrate
    sequence may bind to the active site groove on the alpha subunit (PRKAA1 or PRKAA2), preventing phosphorylation by the
    upstream activating kinase STK11/LKB1
    Domain: The CBS domains mediate binding to AMP, ADP and ATP. 2 sites bind either AMP or ATP, whereas a third site
    contains a tightly bound AMP that does not exchange. Under physiological conditions AMPK mainly exists in its inactive
    form in complex with ATP, which is much more abundant than AMP
    Similarity: Belongs to the 5'-AMP-activated protein kinase gamma subunit family
    Similarity: Contains 4 CBS domains


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: AAKG3_HUMAN, Q9UGI9
    Function: AMP/ATP-binding subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a
    key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK
    activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid
    biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and
    by longer-term effects via phosphorylation of transcription regulators. Also acts as a regulator of cellular polarity
    by remodeling the actin cytoskeleton; probably by indirectly activating myosin. Gamma non-catalytic subunit mediates
    binding to AMP, ADP and ATP, leading to activate or inhibit AMPK: AMP-binding results in allosteric activation of
    alpha catalytic subunit (PRKAA1 or PRKAA2) both by inducing phosphorylation and preventing dephosphorylation of
    catalytic subunits. ADP also stimulates phosphorylation, without stimulating already phosphorylated catalytic subunit.
    ATP promotes dephosphorylation of catalytic subunit, rendering the AMPK enzyme inactive

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: PRKAG3
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PRKAG3
    6 QIAGEN miScript miRNA Assays for microRNAs that regulate PRKAG3:
    hsa-miR-512-5p hsa-miR-3158-3p hsa-miR-4314 hsa-miR-3185 hsa-miR-4293 hsa-miR-1291
    SwitchGear 3'UTR luciferase reporter plasmidPRKAG3 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PRKAG3 (see all 7)
    OriGene shRNA RFP: PRKAG3
    OriGene siRNA: PRKAG3
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PRKAG3

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for PRKAG3

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PRKAG3 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PRKAG3
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: PRKAG3 (NM_017431)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for PRKAG3
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PRKAG3 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for PRKAG3
    Search LifeMap BioReagents cell lines for PRKAG3

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRKAG3

    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004679AMP-activated protein kinase activity TAS10698692
    GO:0005524ATP binding IEA--
    GO:0016301kinase activity ----
    GO:0019901protein kinase binding IDA10698692


    PRKAG3 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for PRKAG3:
     Decreased focal adhesion (FA)  

    Animal Models:
         Mouse knock-out Prkag3tm1Sson for PRKAG3
         1 MGI mutant phenotype (inferred from 1 allele(MGI details for Prkag3):
     homeostasis/metabolism 

    PRKAG3 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/16 super-pathways (see all 16About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1IRS-related events
    IRS-related events1.00
    Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)0.90
    IRS-mediated signalling0.98
    IGF1R signaling cascade0.90
    Insulin receptor signalling cascade0.94
    PI3K Cascade0.84
    IRS-related events triggered by IGF1R0.93
    Signaling by Insulin receptor0.74
    2Development_Leptin signaling via PI3K-dependent pathway
    Development_Leptin signaling via PI3K-dependent pathway1.00
    Adipocytokine signaling pathway0.29
    Development Leptin signaling via PI3K-dependent pathway1.00
    3Energy dependent regulation of mTOR by LKB1-AMPK
    Energy dependent regulation of mTOR by LKB1-AMPK1.00
    Regulation of Rheb GTPase activity by AMPK0.59
    Regulation of AMPK activity via LKB10.82
    4mTOR signalling
    mTOR signalling1.00
    TOR signaling0.33
    PKB-mediated events0.96
    5Membrane Trafficking
    Membrane Trafficking1.00
    Translocation of GLUT4 to the Plasma Membrane0.32

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for PRKAG3
        Development Leptin signaling via PI3K-dependent pathway

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PRKAG3
        AMPK Enzyme Complex Pathway
    eNOS Signaling
    Molecular Mechanisms of Cancer

    1 Cell Signaling Technology (CST) Pathway for PRKAG3
        Glucose / Energy Metabolism

    1 Tocris Bioscience Pathway for PRKAG3
        mTOR Pathway

    1 GeneGo (Thomson Reuters) Pathway for PRKAG3
        Development Leptin signaling via PI3K-dependent pathway

    3 BioSystems Pathways for PRKAG3 
        AMPK signaling
    TOR signaling
    Energy Metabolism

    5/16        Reactome Pathways for PRKAG3 (see all 16)
        PI3K Cascade
    Membrane Trafficking
    Regulation of AMPK activity via LKB1
    Translocation of GLUT4 to the Plasma Membrane
    IGF1R signaling cascade

    1 PharmGKB Pathway for PRKAG3
        Metformin Pathway, Pharmacodynamic

    3         Kegg Pathways  (Kegg details for PRKAG3):
        Insulin signaling pathway
    Adipocytokine signaling pathway
    Hypertrophic cardiomyopathy (HCM)


    PRKAG3 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for PRKAG3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/31 Interacting proteins for PRKAG3 (Q9UGI92, 3 ENSP000002339444) via UniProtKB, MINT, STRING, and/or I2D (see all 31)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PRKAB2O437413, ENSP000002541014I2D: score=1 STRING: ENSP00000254101
    PRKAA1Q131313, ENSP000003461484I2D: score=1 STRING: ENSP00000346148
    PRKAB1Q9Y4783, ENSP000002293284I2D: score=1 STRING: ENSP00000229328
    ACACBENSP000003670794STRING: ENSP00000367079
    PRKAA2ENSP000003602904STRING: ENSP00000360290
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005978glycogen biosynthetic process IEA--
    GO:0006633fatty acid biosynthetic process IEA--
    GO:0007050cell cycle arrest TAS--
    GO:0007243intracellular protein kinase cascade TAS10698692
    GO:0008286insulin receptor signaling pathway TAS--


    PRKAG3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for PRKAG3
    Search CenterWatch for drugs/clinical trials and news about PRKAG3 / AAKG3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PRKAG3 gene: 
    NM_017431.2  

    Unigene Cluster for PRKAG3:

    Protein kinase, AMP-activated, gamma 3 non-catalytic subunit
    Hs.591634  [show with all ESTs]
    Unigene Representative Sequence: NM_017431
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000233944 ENST00000529249 ENST00000470307 ENST00000490971(uc010fvy.1)
    ENST00000430489 ENST00000439262(uc002vjb.1) ENST00000545803 ENST00000392098(uc010zkn.1 uc010zko.1)


    miRNA
    Products:
         
    OriGene 3'-UTR Clone: PRKAG3
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PRKAG3
    6 QIAGEN miScript miRNA Assays for microRNAs that regulate PRKAG3:
    hsa-miR-512-5p hsa-miR-3158-3p hsa-miR-4314 hsa-miR-3185 hsa-miR-4293 hsa-miR-1291
    SwitchGear 3'UTR luciferase reporter plasmidPRKAG3 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PRKAG3 (see all 7)
    OriGene shRNA RFP: PRKAG3
    OriGene siRNA: PRKAG3
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PRKAG3
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PRKAG3 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PRKAG3
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: PRKAG3 (NM_017431)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for PRKAG3
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PRKAG3 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PRKAG3
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat PRKAG3
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PRKAG3
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PRKAG3

    Additional cDNA sequence: 

    AJ249977.1 AK300078.1 AK300687.1 AK309865.1 BC098102.1 BC098255.1 BC098277.1 BC098306.1 

    1 DOTS entry:

    DT.408290 

    10 AceView cDNA sequences:

    NM_017431 AJ249977 CD628193 AA176339 AF214519 CD628195 AA256854 AA256383 
    W94830 AA178898 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PRKAG3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AACTTAGATT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See PRKAG3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PRKAG3

    SOURCE GeneReport for Unigene cluster: Hs.591634

    UniProtKB/Swiss-Prot: AAKG3_HUMAN, Q9UGI9
    Tissue specificity: Skeletal muscle, with weak expression in heart and pancreas

        SABiosciences Expression via Pathway-Focused PCR Arrays including PRKAG3: 
              mTOR Signaling in human mouse rat
              Fatty Acid Metabolism in human mouse rat
              Skeletal Muscle: Myogenesis & Myopathy in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PRKAG3
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat PRKAG3
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PRKAG3
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PRKAG3
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRKAG3

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for PRKAG3 gene from 8/26 species (see all 26)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves PRKAG31 protein kinase, AMP-activated, gamma 3 non-catalytic more 75.6(n)
    75.71(a)
      424208  NM_001031258.2  NP_001026429.2 
    lizard
    (Anolis carolinensis)
    Reptilia PRKAG36
    --
    71(a)
    1 ↔ 1
    1(95953569-95967311)
    African clawed frog
    (Xenopus laevis)
    Amphibia prkag3-prov2 protein kinase, AMP-activated, gamma 3 non-catatlytic more 73.86(n)    BC043738.1 
    zebrafish
    (Danio rerio)
    Actinopterygii zgc:1368501 zgc:136850 64.74(n)
    67.95(a)
      678619  NM_001040366.1  NP_001035456.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta SNF4A&ggr;3 protein amino acid phosphorylation protein
    serine/threonine more
    53(a)     --
    worm
    (Caenorhabditis elegans)
    Secernentea Y111B2A.83   -- 49(a)
    (best of 3)
      III(12610648-12616456)   --
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons SNF46
    sucrose nonfermenting 4-like protein
    21(a)
    1 → many
    1(2899914-2904815)
    rice
    (Oryza sativa)
    Liliopsida --
    --
    CBS domain containing membrane protein, putative, ...
    CBS domain containing membrane protein, putative, ...
    20(a)
    20(a)
    many ↔ many
    many ↔ many
    4(19679007-19687088)
    3(36117329-36124938)


    ENSEMBL Gene Tree for PRKAG3 (if available)
    TreeFam Gene Tree for PRKAG3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PRKAG3 gene
    PRKAG12  PRKAG22  
    2 SIMAP similar genes for PRKAG3 using alignment to 5 protein entries:     AAKG3_HUMAN (see all proteins):
    PRKAG2    PRKAG1

    PRKAG3 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/260 NCBI SNPs in PRKAG3 are shown (see all 260    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1381301571,2
    C,pathogenic225173139(+) TGCCCG/ACACAC 2 /R /W mis11Minor allele frequency- A:0.00NA 4526
    rs730829381,2
    C,--211539927(+) TGGACG/AGATGA 1 -- ds50011Minor allele frequency- A:0.50WA 2
    rs178486141,2
    --211540091(-) TTTTCG/TAACAC 1 -- ds50010--------
    rs1153655071,2
    C,F,--211540723(+) GGCCAT/CCCGAC 1 -- ut311Minor allele frequency- C:0.12WA 118
    rs774473261,2
    F,--211541431(+) TCCCAA/GTCTGA 1 -- int11Minor allele frequency- G:0.14WA 118
    rs739933091,2
    C,F,--211541857(+) GTTAGG/AGATGG 1 -- int14Minor allele frequency- A:0.30WA CSA 124
    rs178486111,2
    C--211542064(-) GTACCA/GTGTGC 1 -- int10--------
    rs134116931,2
    C,F,H,--211542304(+) TCAAGG/TTCCCC 1 -- int15Minor allele frequency- T:0.02NS EA WA 536
    rs729660641,2
    C,F,--211542647(+) GCCTCG/AAATTT 1 -- int11Minor allele frequency- A:0.05NA 120
    rs777776831,2
    F,--211542696(+) GTTTAC/TAGGAA 1 -- int11Minor allele frequency- T:0.11WA 118

    HapMap Linkage Disequilibrium report for PRKAG3 (219687106 - 219696809 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for PRKAG3: --
    Human Gene Mutation Database (HGMD): PRKAG3

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PRKAG3
    DNA2.0 Custom Variant and Variant Library Synthesis for PRKAG3

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PRKAG3 for disorders           About GeneDecksing

    OMIM gene information: 604976    OMIM disorders: --

    4 diseases for PRKAG3:    About MalaCards
    polycystic ovary syndrome    cholesterol    atherosclerosis    schizophrenia

    1 disease from the University of Copenhagen DISEASES database for PRKAG3:
    Wolff-Parkinson-White syndrome
    Human Genome Epidemiology (HuGE) Navigator: PRKAG3 (9 documents)

    Export disorders for PRKAG3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PRKAG3 gene, integrated from 9 sources (see all 34):
    (articles sorted by number of sources associating them with PRKAG3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A mutation in PRKAG3 associated with excess glycogen content in pig skeletal muscle. (PubMed id 10818001)1, 2, 3 Milan D....Andersson L. (2000)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. Characterization of AMP-activated protein kinase gamma-subunit isoforms and their role in AMP binding. (PubMed id 10698692)1, 2 Cheung P.C.F.... Carling D. (2000)
    4. Role of AMP-activated protein kinase gamma 3 genetic variability in glucose and lipid metabolism in non-diabetic whites. (PubMed id 17701023)1, 9 Weyrich P....Haring H.U. (2007)
    5. Comparative sequence analysis of the PRKAG3 region between human and pig: evolution of repetitive sequences and potential new exons. (PubMed id 14970697)1, 9 Amarger V....Andersson L. (2003)
    6. Gain-of-function R225W mutation in human AMPKgamma3 causing increased glycogen and decreased triglyceride in skeletal muscle. (PubMed id 17878938)1, 9 Costford S.R....Harper M.E. (2007)
    7. Ulk1-mediated phosphorylation of AMPK constitutes a negative regulatory feedback loop. (PubMed id 21460634)2 Loffler A.S.... Stork B. (2011)
    8. HDAC1/NFI_B pathway is involved in curcumin inhibiting of Tat-mediated long terminal repeat transactivation. (PubMed id 21344388)1 Zhang H.S....Sang W.W. (2011)
    9. Common variants in 40 genes assessed for diabetes inc idence and response to metformin and lifestyle intervention in the diabetes pre vention program. (PubMed id 20682687)1 Jablonski K.A....Florez J.C. (2010)
    10. Naturally occurring R225W mutation of the gene encodi ng AMP-activated protein kinase (AMPK)gamma(3) results in increased oxidative c apacity and glucose uptake in human primary myotubes. (PubMed id 20473479)1 Crawford S.A....Harper M.E. (2010)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 53632 HGNC: 9387 AceView: PRKAG3 Ensembl:ENSG00000115592 euGenes: HUgn53632
    ECgene: PRKAG3 Kegg: 53632 H-InvDB: PRKAG3

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PRKAG3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PRKAG3 gene:
    Search GeneIP for patents involving PRKAG3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for PRKAG3  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PRKAG3   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PRKAG3  
     OriGene Protein Over-expression Lysate for PRKAG3   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for PRKAG3   OriGene 3'-UTR Clone for PRKAG3  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PRKAG3   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PRKAG3  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for PRKAG3   OriGene Custom Protein Services for PRKAG3  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PRKAG3
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PRKAG3
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PRKAG3
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PRKAG3
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PRKAG3
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PRKAG3
     GenScript Custom Purified and Recombinant Proteins Services for PRKAG3 GenScript cDNA clones with any tag delivered in your preferred vector for PRKAG3
     GenScript PRKAG3-Activity-based Kinase Assay for Compound Screening GenScript Superior Antibodies for PRKAG3
     GenScript Custom overexpressing Cell Line Services for PRKAG3 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Antibodies & Assays for PRKAG3  (AMPKG3)

     Regulatory tfbs in PRKAG3 promoter
     Search Chromatin IP Primers for PRKAG3
     RT2 qPCR Primer Assay in human, mouse, rat PRKAG3
     Search GNC Networks for PRKAG3
     SABiosciences PCR Arrays including human, mouse, rat PRKAG3
     Search Tocris compounds for PRKAG3
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     PRKAG3 antibodies
     PRKAG3 proteins
     PRKAG3 lysates
     Search for Antibodies for PRKAG3 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for PRKAG3
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     Browse ELISAs, CLIAs, Proteins, and Antibodies at Uscn
     Search LifeMap BioReagents cell lines for PRKAG3
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PRKAG3
     SwitchGear 3'UTR luciferase reporter plasmids for PRKAG3
     SwitchGear Promoter luciferase reporter plasmids for PRKAG3
     ThermoFisher Antibodies for PRKAG3
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PRKAG3
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      PRKAG3 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4