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Aliases & Descriptions for PRG2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| BMPG 1, 2, 3 | | MBP 1, 2, 3, 5 | | MBP1 2 | | MGC14537 2 |
| | | Descriptions |
|---|
| Proteoglycan 2 2, 3 | | bone-marrow proteoglycan 2 | | eosinophil granule major basic protein 2 | | eosinophil major basic protein 2 | | natural killer cell activator 2 | | proteoglycan 2 preproprotein 2 | proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 2 |
|
| | Search outside databases for aliases for PRG2 genePrevious GC identifers: GC11M059548 GC11M058668 GC11M057405 GC11M056930 GC19M000764 |
Summaries for PRG2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for PRG2: The protein encoded by this gene is the predominant constituent of the crystalline core of the eosinophil granule. High levels of the proform of this protein are also present in placenta and pregnancy serum, where it exists as a complex with several other proteins including pregnancy-associated plasma protein A (PAPPA), angiotensinogen (AGT), and C3dg. This protein may be involved in antiparasitic defense mechanisms as a cytotoxin and helminthotoxin, and in immune hypersensitivity reactions. It is directly implicated in epithelial cell damage, exfoliation, and bronchospasm in allergic diseases. [provided by RefSeq] UniProtKB/Swiss-Prot: PRG2_HUMAN, P13727Function: Cytotoxin and helminthotoxin. Also induces non-cytolytic histamine release from human basophils. Involved in antiparasitic defense mechanisms and immune hypersensitivity reactions. The proform acts as a proteinase inhibitor, reducing the activity of PAPPAGene Wiki entry for PRG2 (Major_basic_protein) |
Genomic Location for PRG2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the PRG2 gene 
Entrez Gene cytogenetic band: 11q12 Ensembl cytogenetic band: 11q12.1 HGNC cytogenetic band: 11q12PRG2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11M056911:
(about GC identifiers)
Start:
|
56,910,843 bp from pter |
End:
|
56,914,706 bp from pter |
Size:
|
3,864 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000011.8 NT_033903.7
| Proteins for PRG2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PRG2_HUMAN, P13727 (See
protein sequence)Recommended Name: Bone marrow proteoglycan precursor Size: 222 amino acids; 25232 Da
Subunit: In pregnancy serum, the proform exists as a disulfide-linked 2:2 heterotetramer with PAPPA, as a disulfide-linked 2:2 heterotetramer with AGT, and as a complex (probably a 2:2:2 heterohexamer) with AGT and C3dg
Subcellular location: Note=The proform is secreted. The mature protein is found in the matrix of the eosinophil's large specific granule (crystalloid core)
Developmental stage: Levels of the proform increase in serum and placenta during pregnancy
Miscellaneous: Binds heparin. Does not bind calcium
PDB structure from and Proteopedia :1H8U (3D)
 2BRS (3D)
 
Secondary accessions: P81448 Q14227 Q6ICT2REFSEQ proteins: NP_002719.3
ENSEMBL proteins: ENSP00000312134
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
1 Gene Ontology (GO) cellular component term (links to tree view): About this table
Antibodies for PRG2: Assays for PRG2: | Protein
Domains/ Families for PRG2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P13727
ProtoNet protein and cluster: P13727 1 Blocks protein family: IPB002352 Eosinophil major basic protein signature
UniProtKB/Swiss-Prot: PRG2_HUMAN, P13727Similarity: Contains 1 C-type lectin domain | Gene Function for PRG2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002728
Applied Biosystems Silencer® siRNAs for PRG2
Sigma-Aldrich siRNA and siRNA Panels for PRG2  Sigma-Aldrich shRNA Panels and shRNA for PRG2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002728                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002728                                  untagged cDNA clone in CMV expression vector: NM_002728 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002728
UniProtKB/Swiss-Prot: PRG2_HUMAN, P13727Function: Cytotoxin and helminthotoxin. Also induces non-cytolytic histamine release from human basophils. Involved in antiparasitic defense mechanisms and immune hypersensitivity reactions. The proform acts as a proteinase inhibitor, reducing the activity of PAPPA3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for PRG2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for PRG2 
4 Interacting proteins for PRG2 (ENSP000003121343 P137272) via UniProtKB, MINT, and/or STRINGAbout this table
2 Gene Ontology (GO) biological process terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0006955 | immune response |
IEA | -- | | GO:0042742 | defense response to bacterium |
IEA | -- | About this table
|
Drugs & Compounds for PRG2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for PRG2 10/25 Novoseek chemical compound relationships for PRG2 gene (see all 25
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| estromustine |
91.13 |
9 |
9748122 (2), 1888147 (2), 1626200 (1), 7638085 (1) (see all 6) |
| maltose |
50.85 |
8 |
9782274 (1), 19177560 (1), 15097997 (1), 16442308 (1) (see all 6) |
| amylose |
47.49 |
1 |
10071937 (1) |
| phosphatidyl ethanol |
43.19 |
1 |
8541554 (1) |
| cytochalasin |
37.41 |
2 |
8541554 (1), 2170521 (1) |
| allergens |
35.46 |
3 |
10536888 (1), 12197429 (1) |
| chromium |
33.15 |
5 |
10224465 (1), 8541554 (1), 10485250 (1), 1295362 (1) (see all 5) |
| melittin |
28.39 |
2 |
10224465 (1), 10485250 (1) |
| ltc4 |
26.74 |
1 |
2183575 (1) |
| hematoxylin |
21.87 |
3 |
16900805 (1), 8221258 (1), 16556666 (1) |
About this table
|
Transcripts for PRG2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002728
Sigma-Aldrich siRNA and siRNA Panels for PRG2  Sigma-Aldrich shRNA Panels and shRNA for PRG2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002728 REFSEQ mRNAs for PRG2 gene: NM_002728.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002728               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002728                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002728                                  untagged cDNA clone in CMV expression vector: NM_002728  Additional cDNA sequence: AK312195.1 BC005929.1 CR450311.1 CR590212.1 CR590243.1 CR590778.1 CR591196.1 CR591375.1 CR591600.1 CR592750.1 CR593258.1 CR593804.1 CR593939.1 CR596367.1 CR597111.1 CR597334.1 CR598644.1 CR599398.1 CR599756.1 CR599931.1 CR600046.1 CR600307.1 CR600406.1 CR600722.1 CR601470.1 CR602064.1 CR602195.1 CR603205.1 CR603318.1 CR603683.1 CR604416.1 CR604651.1 CR604781.1 CR605665.1 CR605751.1 CR605780.1 CR605831.1 CR606081.1 CR606108.1 CR606261.1 CR606728.1 CR607616.1 CR607791.1 CR607959.1 CR608024.1 CR609247.1 CR609762.1 CR610280.1 CR610568.1 CR610865.1 CR611197.1 CR612910.1 CR613833.1 CR614707.1 CR615315.1 CR615431.1 CR615951.1 CR616445.1 CR617394.1 CR617406.1 CR617968.1 CR618388.1 CR618883.1 CR619331.1 CR619837.1 CR619867.1 CR619994.1 CR620046.1 CR620305.1 CR620478.1 CR621197.1 CR621593.1 CR622244.1 CR622493.1 CR622766.1 CR623831.1 CR624403.1 CR624461.1 CR624696.1 CR624849.1 CR625293.1 CR625586.1 CR625670.1 CR625915.1 CR626156.1 CR626455.1 CR626835.1 DQ846874.1 M35670.1 M36805.1 X14088.1 X65787.1 Y00809.1 17 DOTS entries: DT.454353 DT.100697575 DT.100697567 DT.100697574 DT.95304053 DT.100719032 DT.100842776 DT.120728609 DT.100697579 DT.120728623 DT.91771600 DT.100697572 DT.100851914 DT.86854586 DT.91771603 DT.91771610 DT.95233827 24/873 AceView cDNA sequences (see all 873
):CR599756 CR610280 AA369033 CR603205 CR600046 CR602195 AA286984 CR618388 CR622244 CR603318 CR605780 BU628614 CR604781 CR624849 CF127273 CR619837 CR620305 AU137369 CR624403 CR599931 CR617968 BE877163 CR617406 CR609247
highest scoring ESTs for PRG2:AA369036 AA369398 AA369532 AA369644 AL540626 AL540731 AL540750 AL540853 AL544843 AL549375 Unigene Cluster for PRG2: Proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) Hs.512633 [show with all ESTs]Unigene Representative Sequence: CR621593
GeneLoc Exon Structure
3 Alternative Splicing Database (ASD) splice patterns (SP) for PRG2
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for PRG2
1 Ensembl transcript including schematic representation: ENST00000311862
|
Expression for PRG2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| PRG2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for PRG2
1 / 2 / 3 4 probe-sets matching PRG2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TCCAAGGCTC
SOURCE GeneReport for Unigene cluster: Hs.512633
Expression variation in blood from EXPOLDB for PRG2 UniProtKB/Swiss-Prot: PRG2_HUMAN, P13727Tissue specificity: High levels of the proform in placenta and pregnancy serum; in placenta, localized to X cells of septa and anchoring villi. Lower levels in a variety of other tissues including kidney, myometrium, endometrium, ovaries, breast, prostate, bone marrow and colon |
Orthologs for PRG2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for PRG2 gene from 2 species
About this table Species with no ortholog for PRG2
ENSEMBL Gene Tree for PRG2 | Paralogs for PRG2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for PRG2 gene
- PRG32
|
SNPs/Variants for PRG2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for PRG2 (up to first 250kb)
|
Disorders & Mutations for PRG2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 605601
10/38 Novoseek disease relationships for PRG2 gene (see all 38
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| eosinophilia |
68.17 |
12 |
8043431 (4), 7669668 (2), 2217619 (1), 19139036 (1) (see all 7) |
| hypereosinophilic syndrome |
66.14 |
2 |
8043431 (1), 14988154 (1) |
| dermographism |
58.00 |
2 |
8547035 (1) |
| asthma |
49.63 |
35 |
16982448 (6), 8007454 (2), 1953909 (2), 2178530 (2) (see all 12) |
| nasal polyps |
48.10 |
7 |
2178530 (2), 11112892 (2), 18476621 (1), 1688635 (1) |
| chronic sinusitis |
47.50 |
2 |
18476621 (1), 2178530 (1) |
| dermatitis atopic |
45.79 |
14 |
10749555 (4), 9558841 (4), 1937874 (1), 12197429 (1) |
| prostate carcinoma |
43.80 |
16 |
8653325 (2), 8821700 (1), 8030169 (1), 7638085 (1) (see all 6) |
| pulmonary eosinophilia |
39.75 |
1 |
2010556 (1) |
| allergy |
39.38 |
6 |
10743163 (1), 8492464 (1), 9071212 (1), 2370389 (1) (see all 5) |
About this table
|
Medical News for PRG2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for PRG2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/220 PubMed articles for PRG2 gene (see all 220
):- Purification and cDNA cloning of a novel factor produced by a human T-cell hybridoma: sequence homology with animal lectins. (PubMed id 1565101)1, 2, 3, 4 Yoshimatsu K.... Osawa T. (1992)
- Human eosinophil major basic protein, a mediator of allergic inflammation, is expressed by alternative splicing from two promoters. (PubMed id 7531438)1, 3, 4 Li M.S.... Spry C.J. (1995)
- Localization of pregnancy-associated plasma protein-A and colocalization of pregnancy-associated plasma protein-A messenger ribonucleic acid and eosinophil granule major basic protein messenger ribonucleic acid in placenta. (PubMed id 7526035)1, 3, 4 Bonno M.... Gleich G.J. (1994)
- Crystal structure of the eosinophil major basic protein at 1.8-A. An atypical lectin with a paradigm shift in specificity. (PubMed id 11319227)1, 3, 4 Swaminathan G.J.... Acharya K.R. (2001)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Complex of pregnancy-associated plasma protein-A and the proform of eosinophil major basic protein. Disulfide structure and carbohydrate attachment sites. (PubMed id 12421832)3, 4 Overgaard M.T.... Oxvig C. (2003)
- Expression of recombinant human pregnancy-associated plasma protein-A and identification of the proform of eosinophil major basic protein as its physiological inhibitor. (PubMed id 10913121)3, 4 Overgaard M.T....Oxvig C. (2000)
- Messenger ribonucleic acid levels of pregnancy-associated plasma protein-A and the proform of eosinophil major basic protein: expression in human reproductive and nonreproductive tissues. (PubMed id 10491647)3, 4 Overgaard M.T.... Haaning J. (1999)
- Identification of angiotensinogen and complement C3dg as novel proteins binding the proform of eosinophil major basic protein in human pregnancy serum and plasma. (PubMed id 7539791)3, 4 Oxvig C.... Sottrup-Jensen L. (1995)
- Amino acid sequence of human pregnancy-associated plasma protein-A derived from cloned cDNA. (PubMed id 7508748)3, 4 Kristensen T.... Sottrup-Jensen L. (1994)
|
Search for PRG2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing PRG2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing PRG2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PRG2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| ATLAS Chromosomes in Cancer entry for PRG2 | Genetics and Cytogenetics in Oncology and Haematology | | Wikipedia | http://en.wikipedia.org/wiki/Major_basic_protein | | Functional Glycomics Gateway - Glycan Binding | http://www.functionalglycomics.org/glycomics/GBPServlet?&operationType=view&cbpId=cbp_hum_Ctlect_207 |
|
| | | About This Section
| --
| Services for PRG2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for PRG2:

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