PPP2R1B Gene
protein-coding GIFtS : 72
GC11M111102
protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform (Previous names: protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
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Aliases & Descriptions for PPP2R1B
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases MGC26454 2 PP2A-A-beta 2 PR65B 1 , 2
Descriptions PP2A, subunit A, PR65-beta isoform 2 , 3 PP2A, subunit A, R1-beta isoform 2 , 3 beta isoform of regulatory subunit A, protein phosphatase 2 2 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform 1 protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform 2 protein phosphatase 2, structural/regulatory subunit A, beta 2 serine/threonine protein phosphatase 2A, 65 kDa regulatory subunit A, beta isoform 2
Search outside databases for aliases for PPP2R1B genePrevious GC identifers: GC11M113950 GC11M113109 GC11M111631 GC11M111135
Summaries for PPP2R1B (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for PPP2R1B : This gene encodes a constant regulatory subunit of protein phosphatase 2. Protein phosphatase 2 isone of the four major Ser/Thr phosphatases, and it is implicated in the negative control of cellgrowth and division. It consists of a common heteromeric core enzyme, which is composed of acatalytic subunit and a constant regulatory subunit, that associates with a variety of regulatorysubunits. The constant regulatory subunit A serves as a scaffolding molecule to coordinate theassembly of the catalytic subunit and a variable regulatory B subunit. This gene encodes a betaisoform of the constant regulatory subunit A. Defects in this gene could be the cause of some lungand colon cancers. At least two transcript variants encoding different isoforms have been foundfor this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154 Function : The PR65 subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinatethe assembly of the catalytic subunit and a variable regulatory B subunit
Gene Wiki entry for PPP2R1B
Genomic Location for PPP2R1B
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the PPP2R1B gene Entrez Gene cytogenetic band: 11q23.2 Ensembl cytogenetic band: 11q23.1 HGNC cytogenetic band: 11q23.1 PPP2R1B Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11M111102:
(about GC identifiers )
Start:
111,102,842 bp from pter
End:
111,142,379 bp from pter
Size:
39,538 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000011.8 NT_033899.7 Proteins for PPP2R1B
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154 (See
protein sequence )Recommended Name: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform Size : 601 amino acids; 66214 Da
Subunit : PP2A consists of a common heterodimeric core enzyme, composed of a 36 kDa catalyticsubunit (subunit C) and a 65 kDa constant regulatory subunit (PR65 or subunit A), that associateswith a variety of regulatory subunits. Proteins that associate with the core dimer include threefamilies of regulatory subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56families), the 48 kDa variable regulatory subunit, viral proteins, and cell signaling molecules.Interacts with IPO9. Interacts with SGOL1
Sequence caution : Sequence=AAA59983.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence.Sequence of unknown origin in the N-terminal part;
Secondary accessions : O75620 Q8NHV8Alternative splicing : 2 isoforms : P30154-1 P30154-2
REFSEQ proteins (2 alternative transcripts):
NP_002707.3 NP_859050.1 ENSEMBL proteins: ENSP00000311344 ENSP00000343317 ENSP00000376775 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells Antibodies for PPP2R1B: Assays for PPP2R1B:
Protein
Domains/ Families for PPP2R1B(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P30154 ProtoNet protein and cluster: P30154
1 Blocks protein family : IPB000357 HEAT repeat UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154 Domain : Each HEAT repeat appears to consist of two alpha helices joined by a hydrophilic region,the intrarepeat loop. The repeat units may be arranged laterally to form a rod-like structure Similarity : Belongs to the phosphatase 2A regulatory subunit A familySimilarity : Contains 15 HEAT repeats
Gene Function for PPP2R1B
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_002716 Applied Biosystems Silencer ® siRNAs for PPP2R1B Sigma-Aldrich siRNA and siRNA Panels for PPP2R1B Sigma-Aldrich shRNA Panels and shRNA for PPP2R1B Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_002716                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_002716                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_002716  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_181699 UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154 Function : The PR65 subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinatethe assembly of the catalytic subunit and a variable regulatory B subunit
Genatlas biochemistry entry for PPP2R1B :serine/threonine phosphatase 2 (formerly 2A),regulatory subunit A,beta isoform,65kDa,altered inhuman lung and colon carcinomas,see TSG11F,LOH11CR2A 3 Gene Ontology (GO) molecular function terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0003823 antigen binding
ISS -- GO:0005515 protein binding
ISS -- GO:0046982 protein heterodimerization activity
ISS --
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Pathways & Interactions for PPP2R1B
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/13 Sigma-Aldrich "Your Favorite Gene" Pathways for PPP2R1B (Your Favorite Gene powered by Ingenuity) (see all 13
) Gene Network CentralTM Interacting Genes and Proteins Network for PPP2R1B 5/47 Interacting proteins for PPP2R1B (ENSP00000311344 3 P30154 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 47
)About this table
Drugs & Compounds for PPP2R1B (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for PPP2R1B
Sigma-Aldrich Small Molecules for PPP2R1B:Inhibitor
Compounds for PPP2R1B available from Tocris Bioscience Compound Action
CAS
number Cantharidin Protein phosphatase 1 and 2A inhibitor [56-25-7] Okadaic acid Protein phosphatase 1 and 2A inhibitor [78111-17-8] Calyculin A Protein phosphatase 1 and 2A inhibitor [101932-71-2]
About this table 1 Novoseek chemical compound relationship for PPP2R1B gene
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Transcripts for PPP2R1B(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_002716 Sigma-Aldrich siRNA and siRNA Panels for PPP2R1B Sigma-Aldrich shRNA Panels and shRNA for PPP2R1B Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_002716 NM_181699
REFSEQ mRNAs for PPP2R1B gene (2 alternative transcripts): NM_002716.4 NM_181699.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002716 NM_181699
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_002716                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_002716                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_002716  
Additional cDNA sequence: AF087438.1 AF163473.1 AK292275.1 AK293388.1 AK294716.1 AK296455.1 AK301705.1 BC027596.2 CR617223.1 EF491803.1 EF491816.1 M65254.1
15 DOTS entries : DT.453780 DT.100799991 DT.100647153 DT.95169014 DT.99949220 DT.454694 DT.95315557 DT.95169015 DT.40243343 DT.85105424 DT.97810948 DT.100847120 DT.120739352 DT.120739428 DT.92445488
24/249 AceView cDNA sequences (see all 249
):BQ438877 AI559380 BQ773499 H27269 BF149339 AW136215 BE766505 AF087438 CF132593 BQ213614 AA491164 BM708361 F04139 CA308184 BM462294 BU507259 BE018689 BQ215210 AI251884 AU131892 CA308156 AI206073 AA769580 BP371337
highest scoring ESTs for PPP2R1B :M65254 AF087438 AF163473 AU280835 AV747834 AW505257 BC027596 BG718830 BI087845 BI459967
Unigene Cluster for PPP2R1B: Protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform Hs.584790 [show with all ESTs ] Unigene Representative Sequence: NM_002716 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for PPP2R1B (see all 7
) ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8a · 8b ^ 9 ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 SP1 :         -                                       -       SP2 :         -                                             SP3 :         -   -   -                                         SP4 :                                     -   -   -             SP5 :         -     -                                        
About this scheme ECgene alternative splicing isoforms for PPP2R1B 3 Ensembl transcripts including schematic representations : ENST00000311129
ENST00000341980
ENST00000393055
Expression for PPP2R1B
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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PPP2R1B expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for PPP2R1B 1 / 2 / 3
19 probe-sets matching PPP2R1B gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GGGAAGGGACSOURCE GeneReport for Unigene cluster: Hs.584790 Expression variation in blood from EXPOLDB for PPP2R1B
Orthologs for PPP2R1B
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for PPP2R1B gene from 5/14 species (see all 14
)
About this table Species with no ortholog for PPP2R1B ENSEMBL Gene Tree for PPP2R1B Paralogs for PPP2R1B (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for PPP2R1B gene PPP2R1A 2
SNPs/Variants for PPP2R1B (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for PPP2R1B (up to first 250kb)
Disorders & Mutations for PPP2R1B
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 603113 disorders : 211980 UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154
Defects in PPP2R1B might be a cause of some lung and colorectal cancers
10/15 Novoseek disease relationships for PPP2R1B gene (see all 15
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
allelic loss
58.00
1
10935485 (1)
somatic mutations
56.83
2
10935485 (1), 15672406 (1)
paraganglioma
50.50
2
9795170 (1)
colon cancer
45.71
5
10597236 (1), 10896920 (1), 11342371 (1), 9765152 (1) (see all 5 )
ovarian cancer
39.34
6
10597236 (4), 10935485 (1)
colorectal cancer
37.71
7
14767517 (4), 10896920 (3)
cervical cancer
34.63
5
17343570 (3), 15672406 (1), 11118052 (1)
cancer lung
28.47
4
10597236 (1), 10935485 (1), 10337999 (1)
tumors
28.09
9
10597236 (2), 10935485 (2), 14767517 (2), 10942591 (1) (see all 6 )
breast carcinoma
22.35
2
10713707 (1), 16276521 (1)
About this table Human Gene Mutation Database : PPP2R1B Genetic Association Database: PPP2R1B Human Genome Epidemiology Navigator: PPP2R1B (2 documents)
Medical News for PPP2R1B (Possibly Related Articles in
Doctor's Guide )
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Publications for PPP2R1B (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/51 PubMed articles for PPP2R1B gene (see all 51
): Genomic organization and precise physical location of protein phosphatase 2A regulatory subunit A beta isoform gene on chromosome band 11q23. (PubMed id 9795170) 1, 2, 3, 4 Baysal B.E....Richard C.W. (1998) Alpha- and beta-forms of the 65-kDa subunit of protein phosphatase 2A have a similar 39 amino acid repeating structure. (PubMed id 2159327) 2, 3, 4 Hemmings B.A.... Stone S.R. (1990) Absence of PPP2R1B gene alterations in primary ovarian cancers. (PubMed id 10597236) 1, 3, 4 Campbell I.G. and Manolitsas T. (1999) Alterations of the PPP2R1B gene located at 11q23 in human colorectal cancers. (PubMed id 10896920) 1, 3, 4 Takagi Y.... Saji S. (2000) Alterations of the PPP2R1B gene in human lung and colon cancer. (PubMed id 9765152) 1, 3, 4 Wang S.S....Evans G.A. (1998) The glycine 90 to aspartate alteration in the Abeta subunit of PP2A (PPP2R1B) associates with breast cancer and causes a deficit in protein function. (PubMed id 16276521) 1, 3, 6 Esplin E.D....Evans G.A. (2006) Alterations in the suppressor gene PPP2R1B in parathyroid hyperplasias and adenomas. (PubMed id 11996789) 1, 3, 4 Hemmer S.... Joensuu H. (2002) A high-resolution integrated map spanning the SDHD gene at 11q23: a 1.1-Mb BAC contig, a partial transcript map and 15 new repeat polymorphisms in a tumour-suppressor region. (PubMed id 11313745) 1, 3, 4 Baysal B.E.... Devlin B. (2001) Interaction between protein phosphatase 2A and members of the importin beta superfamily. (PubMed id 12670497) 3, 4 Lubert E.J. and Sarge K.D. (2003) PPP2R1B gene alterations inhibit interaction of PP2A-Abeta and PP2A-C proteins in colorectal cancers. (PubMed id 14767517) 1, 3 Tamaki M....Yamaguchi A. (2004)
Search for PPP2R1B
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AND OR
Aliases
PPP2R1B (Gene Symbol) MGC26454 PP2A-A-beta PR65B PP2A, subunit A, PR65-beta isoform PP2A, subunit A, R1-beta isoform beta isoform of regulatory subunit A, protein phosphatase 2 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform protein phosphatase 2, structural/regulatory subunit A, beta serine/threonine protein phosphatase 2A, 65 kDa regulatory subunit A, beta isoform
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Genome Databases showing PPP2R1B
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing PPP2R1B
(According to HUGE )
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Specialized Databases showing PPP2R1B (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for PPP2R1B (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for PPP2R1B:
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009