PPP2R1B Gene
protein-coding GIFtS: 65
GCID: GC11M111634
|
|
protein phosphatase 2, regulatory subunit A, beta(Previous names: protein phosphatase 2 (formerly 2A), regulatory subunit...)
| |
Aliases for PPP2R1B gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb) About This Section
|
| Aliases |
|---|
| Protein Phosphatase 2, Regulatory Subunit A, Beta1 2 | | PP2A, Subunit A, R1-Beta Isoform2 | | PP2A-Abeta1 2 | | Protein Phosphatase 2, Structural/Regulatory Subunit A, Beta2 | | PR65B1 2 | | Serine/Threonine-Protein Phosphatase 2A 65 KDa Regulatory Subunit A BetaIsoform2 | | Protein Phosphatase 2 (Formerly 2A), Regulatory Subunit A, Beta Isoform1 2 | | PP2A Subunit A Isoform PR65-Beta3 | | Protein Phosphatase 2 (Formerly 2A), Regulatory Subunit A (PR 65), Beta Isoform1 | | PP2A Subunit A Isoform R1-Beta3 | | PP2A, Subunit A, PR65-Beta Isoform2 | | |
Export aliases for PPP2R1B gene to outside databasesPrevious GC identifers: GC11M113950 GC11M113109 GC11M111631 GC11M111135 GC11M111102 GC11M107521 GC11M111613 GC11M111618 |
Summaries for PPP2R1B gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| Entrez Gene summary for PPP2R1B: This gene encodes a constant regulatory subunit of protein phosphatase 2. Protein phosphatase 2 is one of the fourmajor Ser/Thr phosphatases, and it is implicated in the negative control of cell growth and division. It consists of acommon heteromeric core enzyme, which is composed of a catalytic subunit and a constant regulatory subunit, thatassociates with a variety of regulatory subunits. The constant regulatory subunit A serves as a scaffolding moleculeto coordinate the assembly of the catalytic subunit and a variable regulatory B subunit. This gene encodes a betaisoform of the constant regulatory subunit A. Mutations in this gene have been associated with some lung and coloncancers. Alternatively spliced transcript variants have been described. (provided by RefSeq, Apr 2010) UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154Function: The PR65 subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of thecatalytic subunit and a variable regulatory B subunit
summary
for PPP2R1B: Protein ser/thr phosphatases are a group of enzymes that catalyze the removal of phosphate groups from serine and/or threonine residues by the hydrolysis of phosphoric acid monoesters. They directly oppose the actions of kinases and phosphorylases and therefore play an integral role in many signal transduction pathways. There are two groups of serine/threonine phosphatases; phosphoprotein phosphatases (e.g. PP1, calcineurin), which are sensitive to okadaic acid and metallo-phosphatases (e.g. PP2C), which require a divalent cation, commonly Mg2+, for catalytic activity. Dephosphorylation, depending on the residue that the phosphate group is removed from, can have a stimulatory or inhibitory effect on the target molecule. This makes protein Ser/Thr phosphatases essential for many signal transduction pathways. Protein Ser/Thr phosphatase are regulated by their subcellular localization and by inhibitor proteins, which are subtype-specific. Gene Wiki entry for PPP2R1B
|
Genomic Views for PPP2R1B gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics) About This Section
| RefSeq DNA sequence:- NC_000011.9 NC_018922.1 NT_033899.8
Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PPP2R1B gene promoter: COUP-TF1 Pax-6 COUP XBP-1 HNF-4alpha2 Evi-1 HNF-4alpha1 RORalpha1 COUP-TF Pax-4a Other transcription factors
Search SABiosciences Chromatin IP Primers for PPP2R1B
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PPP2R1B |
Genomic Location: Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 11q23.2 Ensembl cytogenetic band: 11q23.1 HGNC cytogenetic band: 11q23.1PPP2R1B Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)

GeneLoc information about chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11M111634: view genomic region
(about GC identifiers)
Start:
|
111,597,632 bp from pter |
End:
|
111,637,169 bp from pter |
Size:
|
39,538 bases |
Orientation:
|
minus strand |
|
Proteins for PPP2R1B gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
| UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154 (See
protein sequence)Recommended Name: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform Size: 601 amino acids; 66214 Da
Subunit: PP2A consists of a common heterodimeric core enzyme, composed of a 36 kDa catalytic subunit (subunit C) and a65 kDa constant regulatory subunit (PR65 or subunit A), that associates with a variety of regulatory subunits.Proteins that associate with the core dimer include three families of regulatory subunits B (the R2/B/PR55/B55,R3/B''/PR72/PR130/PR59 and R5/B'/B56 families), the 48 kDa variable regulatory subunit, viral proteins, and cellsignaling molecules. Interacts with IPO9. Interacts with SGOL1. Interacts with RAF1
Sequence caution: Sequence=AAA59983.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Sequence of unknownorigin in the N-terminal part;
Secondary accessions: B0YJ69 B4DGQ6 B4DWW5 F8W8G1 O75620 Q8NHV8Alternative splicing: 4 isoforms: P30154-1 P30154-2 P30154-3 P30154-4 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for PPP2R1B: NX_P30154
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_P30154 PPP2R1B Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins (5 alternative transcripts):
NP_001171033.1 NP_001171034.1 NP_002707.3 NP_859050.1 NP_859051.1 ENSEMBL proteins: ENSP00000311344 ENSP00000410671 ENSP00000437193 ENSP00000436626 ENSP00000343317 ENSP00000376775 ENSP00000433598 ENSP00000432666 ENSP00000434705 ENSP00000415759 Reactome Protein details: P30154 Human Recombinant Protein Products:
Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0030117 | membrane coat |
-- | -- |
PPP2R1B for ontologies About GeneDecksing
PPP2R1B Antibody Products: Assay Products for PPP2R1B: |
Protein
Domains / Families for PPP2R1B gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
PPP2R1B for domains About GeneDecksing
4 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry P30154ProtoNet protein and cluster: P30154 1 Blocks protein family: IPB000357 HEAT repeat
UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154Domain: Each HEAT repeat appears to consist of two alpha helices joined by a hydrophilic region, the intrarepeat loop.The repeat units may be arranged laterally to form a rod-like structureSimilarity: Belongs to the phosphatase 2A regulatory subunit A familySimilarity: Contains 15 HEAT repeats |
Function for PPP2R1B gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
| Function Summary: UniProtKB/Swiss-Prot: 2AAB_HUMAN, P30154Function: The PR65 subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of thecatalytic subunit and a variable regulatory B subunit Genatlas biochemistry entry for PPP2R1B:serine/threonine phosphatase 2 (formerly 2A),regulatory subunit A,beta isoform,65kDa,altered in human lung and coloncarcinomas,see TSG11F,LOH11CR2A
Clone Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PPP2R1B (see all 8) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PPP2R1B (see all 5) OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector (see all 5): PPP2R1B (NM_181699) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PPP2R1B | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PPP2R1B  |
In Situ Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PPP2R1B |
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005515 | protein binding |
IPI | -- |
PPP2R1B for ontologies About GeneDecksing
2 GenomeRNAi human phenotypes for PPP2R1B:
|
Pathways & Interactions for PPP2R1B gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
| Unified GeneCards pathways - 5/50 super-pathways (see all 50) About this table  See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | TRAF6 Mediated Induction of proinflammatory cytokines | | | 2 | ERK/MAPK targets | | | 3 | M Phase | | | 4 | Cyclins and Cell Cycle Regulation | | | 5 | Immune System | |
Pathway sources See GeneCards unified pathways Show all pathways
1 EMD Millipore Pathway for PPP2R1B 5/25 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PPP2R1B (see all 25) 2 GeneGo (Thomson Reuters) Pathways for PPP2R1B 3 BioSystems Pathways for PPP2R1B 
5/65
Reactome Pathways for PPP2R1B (see all 65)
5/8
Kegg Pathways (Kegg details for PPP2R1B) (see all 8):
PPP2R1B for pathways About GeneDecksing
Interactions:
SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PPP2R1B
STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)
 5/673 Interacting proteins for PPP2R1B (P301541, 2, 3 ENSP000003113444) via UniProtKB, MINT, STRING, and/or I2D (see all 673)| Interactant | Interaction Details |
|---|
| GeneCard | External ID(s) |
|---|
| PPP2CA | P677751, 2, 3, ENSP000004184474 | EBI-2559603,EBI-712311 MINT-8287178 I2D:
score=5 STRING: ENSP00000418447 | | PPP2R5C | Q133622, 3, ENSP000003339054 | MINT-2835624 I2D:
score=5 STRING: ENSP00000333905 | | PPP2R2A | P631511, 3, ENSP000003701134 | EBI-2559603,EBI-2556013 I2D:
score=4 STRING: ENSP00000370113 | | HDAC1 | Q135472, 3, ENSP000003626494 | MINT-7945693 I2D:
score=3 STRING: ENSP00000362649 | | PPP2R5E | Q165371, 3, ENSP000003376414 | EBI-2559603,EBI-968374 I2D:
score=3 STRING: ENSP00000337641 | About this table
Gene Ontology (GO): 3 biological process terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0006886 | intracellular protein transport |
-- | -- | | GO:0016192 | vesicle-mediated transport |
-- | -- | | GO:2001241 | positive regulation of extrinsic apoptotic signaling pathway in absence of ligand |
IMP | -- |
PPP2R1B for ontologies About GeneDecksing
|
Drugs & Compounds for PPP2R1B gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
PPP2R1B for compounds About GeneDecksing
Compounds for PPP2R1B available from Tocris Bioscience About this table 3 Novoseek chemical compound relationships for PPP2R1B gene About this table
Search CenterWatch for drugs/clinical trials and news about PPP2R1B / 2AAB 
|
Transcripts for PPP2R1B gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
) About This Section
| REFSEQ mRNAs for PPP2R1B gene (5 alternative transcripts): NM_001177562.1 NM_001177563.1 NM_002716.4 NM_181699.2 NM_181700.1 Unigene Cluster for PPP2R1B: Protein phosphatase 2, regulatory subunit A, beta Hs.584790 [show with all ESTs]Unigene Representative Sequence: NM_00271613 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000311129(uc009yye.1 uc001plw.1 uc010rwi.1) ENST00000426998(uc009yyf.1) ENST00000530787 ENST00000526287 ENST00000527614(uc001plx.1 uc010rwk.1 uc010rwl.1 uc010rwj.1) ENST00000534521 ENST00000341980 ENST00000393055 ENST00000529672 ENST00000531890 ENST00000534500 ENST00000531373 ENST00000427203
Clone Products: |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PPP2R1B (see all 8) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PPP2R1B (see all 5) OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector (see all 5): PPP2R1B (NM_181699) | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PPP2R1B | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PPP2R1B  |
Additional cDNA sequence: AF087438.1 AF163473.1 AK292275.1 AK293388.1 AK294716.1 AK296455.1 AK301705.1 BC027596.2 EF491803.1 M65254.1 15 DOTS entries: DT.453780 DT.100799991 DT.100647153 DT.95169014 DT.95315557 DT.454694 DT.95169015 DT.40243343 DT.85105424 DT.97810948 DT.99949220 DT.100847120 DT.120739352 DT.120739428 DT.92445488 24/249 AceView cDNA sequences (see all 249): NM_002716 CF132593 AI034287 CA308156 AA769580 AU280835 CA308184 F04139 H27269 BE277710 AI559380 NM_181699 BX951077 BQ230803 AI913263 BU617832 BM906510 BQ213614 BE766505 BQ215210 AW136215 AA491164 AU131747 AU131892 GeneLoc Exon Structure
5/7 Alternative Splicing Database (ASD) splice patterns (SP) for PPP2R1B (see all 7) About this scheme
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6a | · | 6b | ^ | 7 | ^ | 8a | · | 8b | ^ | 9 | ^ | 10a | · | 10b | ^ | 11 | ^ | 12a | · | 12b | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | 18 | |
| SP1: | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |
| SP2: | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
ECgene alternative splicing isoforms for PPP2R1B
|
Expression for PPP2R1B gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| PPP2R1B expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this imageBioGPS CGAP TAG: GGGAAGGGAC
About this image See PPP2R1B Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PPP2R1B
SOURCE GeneReport for Unigene cluster: Hs.584790 SABiosciences Expression via Pathway-Focused PCR Arrays including PPP2R1B:
Primer Products: |  | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PPP2R1B Browse OriGene validated miRNA SYBR primer pairs
| |  | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat PPP2R1B | |  | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PPP2R1B | |  | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PPP2R1B | In Situ Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PPP2R1B |
Orthologs for PPP2R1B gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of eukaryotes.
Orthologs for PPP2R1B gene from 6/29 species (see all 29) About this table
| Organism |
Taxonomic classification |
Gene |
Description |
Human Similarity |
Orthology Type |
Details |
African clawed frog (Xenopus laevis) |
Amphibia |
ppp2r1b-prov2 |
phosphorylase phosphatase |
80.54(n) |
  |
BC043624.1 |
zebrafish (Danio rerio) |
Actinopterygii |
ppp2r1b1 |
protein phosphatase 2 (formerly 2A), regulatory subunit more |
74.23(n) 88.4(a) |
  |
449548 NM_001005590.1 NP_001005590.1 |
fruit fly (Drosophila melanogaster) |
Insecta |
Pp2A-29B3 |
protein amino acid dephosphorylation protein phosphatase more |
72(a) |
  |
29B2 -- |
worm (Caenorhabditis elegans) |
Secernentea |
F48E8.53 |
Protein phosphatase 2A |
62(a) |
  |
III(5521881-5524543) -- |
thale cress (Arabidopsis thaliana) |
eudicotyledons |
RCN11 |
serine/threonine-protein phosphatase 2A regulatory more |
58.04(n) 57.64(a) |
  |
839135 NM_102360.3 NP_173920.1 |
rice (Oryza sativa) |
Liliopsida |
-- |
HEAT repeat family protein, putative, expressed |
57(a) |
1 → many |
9(3756920-3763491) |
ENSEMBL Gene Tree for PPP2R1B (if available) TreeFam Gene Tree for PPP2R1B (if available)  |
Paralogs for PPP2R1B gene(Paralogs according to
1HomoloGene, 2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68) About This Section
| Paralogs for PPP2R1B gene
- PPP4R12 PPP4R1L2 PPP2R1A2
1 SIMAP similar gene for PPP2R1B using alignment to 7 protein entries: 2AAB_HUMAN (see all proteins):PPP2R1A
PPP2R1B for paralogs About GeneDecksing
|
Genomic Variants for PPP2R1B gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical significance | Chr 11 pos | Sequence | # | AA Chg | Type | More | # | Allele freq | Pop | Total sample | More |
|---|
HapMap Linkage Disequilibrium report for PPP2R1B (111597632 - 111637169 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for PPP2R1B: -- Human Gene Mutation Database (HGMD): PPP2R1B
 | SABiosciences Cancer Mutation PCR Assays |
|  | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PPP2R1B |
|
Disorders
/ Diseases for PPP2R1B gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database, Novoseek,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
PPP2R1B for disorders About GeneDecksing
OMIM gene information: 603113 OMIM disorders: 211980 20/33 diseases for PPP2R1B (see all 33): About MalaCardscolon cancer cerebral cavernous malformations cavernous malformation cerebral cavernous malformations 3 mantle cell lymphoma paraganglioma chronic lymphocytic leukemia lymphocytic leukemia wilms tumor cystic fibrosis squamous cell carcinoma chagas disease hepatocellular carcinoma cervical cancer hepatitis c ovarian cancer trypanosomiasis colorectal cancer carcinoma cerebritis
10/15 Novoseek disease relationships for PPP2R1B gene (see all 15) About this table
| Disease |
-log (P-Val) |
Hits |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| allelic loss |
57.8 |
1 |
10935485 (1) |
| somatic mutations |
56.1 |
2 |
10935485 (1), 15672406 (1) |
| paraganglioma |
49.2 |
2 |
9795170 (1) |
| colon cancer |
44.5 |
5 |
10597236 (1), 10896920 (1), 11342371 (1), 9765152 (1) (see all 5) |
| ovarian cancer |
38.1 |
6 |
10597236 (4), 10935485 (1) |
| colorectal cancer |
36.3 |
7 |
14767517 (4), 10896920 (3) |
| cervical cancer |
33.1 |
5 |
17343570 (3), 15672406 (1), 11118052 (1) |
| cancer lung |
27.2 |
4 |
10597236 (1), 10935485 (1), 10337999 (1) |
| tumors |
27 |
9 |
10597236 (2), 10935485 (2), 14767517 (2), 10942591 (1) (see all 6) |
| breast carcinoma |
21.6 |
2 |
10713707 (1), 16276521 (1) |
Genetic Association Database (GAD): PPP2R1B Human Genome Epidemiology (HuGE) Navigator: PPP2R1B (5 documents) Export disorders for PPP2R1B gene to outside databases
|
Publications for PPP2R1B gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for PPP2R1B gene, integrated from 9 sources (see all 81): (articles sorted by number of sources associating them with PPP2R1B) | |  | Utopia: connect your pdf to the dynamic world of online information |
- Genomic organization and precise physical location of protein phosphatase 2A regulatory subunit A beta isoform gene on chromosome band 11q23. (PubMed id 9795170)1, 2, 3, 9 Baysal B.E.... Richard C.W. III (1998)
- Alpha- and beta-forms of the 65-kDa subunit of protein phosphatase 2A have a similar 39 amino acid repeating structure. (PubMed id 2159327)1, 2, 3 Hemmings B.A.... Stone S.R. (1990)
- Absence of PPP2R1B gene alterations in primary ovarian cancers. (PubMed id 10597236)1, 2, 9 Campbell I.G. and Manolitsas T. (1999)
- Alterations of the PPP2R1B gene located at 11q23 in human colorectal cancers. (PubMed id 10896920)1, 2, 9 Takagi Y.... Saji S. (2000)
- Alterations of the PPP2R1B gene in human lung and colon cancer. (PubMed id 9765152)1, 2, 9 Wang S.S....Evans G.A. (1998)
- The glycine 90 to aspartate alteration in the Abeta subunit of PP2A (PPP2R1B) associates with breast cancer and causes a deficit in protein function. (PubMed id 16276521)1, 4, 9 Esplin E.D....Evans G.A. (2006)
- Alterations in the suppressor gene PPP2R1B in parathyroid hyperplasias and adenomas. (PubMed id 11996789)1, 2, 9 Hemmer S.... Joensuu H. (2002)
- A high-resolution integrated map spanning the SDHD gene at 11q23: a 1.1-Mb BAC contig, a partial transcript map and 15 new repeat polymorphisms in a tumour-suppressor region. (PubMed id 11313745)1, 2, 9 Baysal B.E.... Devlin B. (2001)
- Shugoshin collaborates with protein phosphatase 2A to protect cohesin. (PubMed id 16541025)1, 2 Kitajima T.S.... Watanabe Y. (2006)
- Interaction between protein phosphatase 2A and members of the importin beta superfamily. (PubMed id 12670497)1, 2 Lubert E.J. and Sarge K.D. (2003)
|
External Searches for PPP2R1B gene
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing PPP2R1B gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing PPP2R1B gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PPP2R1B gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
|
About This Section
| Patent Information for PPP2R1B gene: Search GeneIP for patents involving PPP2R1B
GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products for PPP2R1B gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
|
 | |
 | |
 |
| | | | Browse OriGene Antibodies | | OriGene shRNA RFP for PPP2R1B | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PPP2R1B | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PPP2R1B | | OriGene Protein Over-expression Lysate for PPP2R1B | | Browse OriGene Fluorogenic Cell Assay Kits | | OriGene siRNA for PPP2R1B | | OriGene 3'-UTR Clone for PPP2R1B | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PPP2R1B | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PPP2R1B | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | Browse OriGene full length recombinant human proteins expressed in human HEK293 cells | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | OriGene Custom Antibody Services for PPP2R1B | | OriGene Custom Protein Services for PPP2R1B | | OriGene Custom Immunoassay Development | | |
| |  |
 |
| | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PPP2R1B | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PPP2R1B | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PPP2R1B | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PPP2R1B | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PPP2R1B | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PPP2R1B |
| |
 |  |  |  | |
| | | |  |  |  |  | | | | |
 |
 |
 |
 | | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PPP2R1B |
|  |  |  | | | Search ThermoFisher Antibodies for PPP2R1B |
| | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PPP2R1B |
|
|
|
|