PPIB Gene
protein-coding GIFtS : 72
GCID: GC15 M064448
peptidylprolyl isomerase B (cyclophilin B)
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Aliasesfor PPIB gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Peptidylprolyl Isomerase B (Cyclophilin B) 1 2 SCYLP2 3 CYPB1 2 3 5 PPIase B2 3 OI91 2 5 EC 5.2.1.83 8 Rotamase B2 3 Cyclophilin-Like Protein2 CYP-S12 3 Peptidyl-Prolyl Cis-Trans Isomerase B2 S-Cyclophilin1 Cyclophilin B3
Export aliases for PPIB gene to outside databases Previous GC identifers: GC15M060234 GC15M057607 GC15M062026 GC15M062163 GC15M062235 GC15M041272
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Summariesfor PPIB gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for PPIB : The protein encoded by this gene is a cyclosporine-binding protein and is mainly located within the endoplasmic reticulum. It is associated with the secretory pathway and released in biological fluids. This protein can bind to cells derived from T- and B-lymphocytes, and may regulate cyclosporine A-mediated immunosuppression. Variants have been identified in this protein that give rise to recessive forms of osteogenesis imperfecta. (provided by RefSeq, Oct 2009) UniProtKB/Swiss-Prot: PPIB_HUMAN, P23284 Function : PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidicpeptide bonds in oligopeptides Gene Wiki entry for PPIB
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Genomic Viewsfor PPIB gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000015.9 NC_018926.1 NT_010194.17 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PPIB gene promoter: Bach1 AP-1 Tal-1 E47 AREB6 FAC1 Pax-3 Hand1 Other transcription factors Search SABiosciences Chromatin IP Primers for PPIB Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PPIB
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 15q21-q22 Ensembl cytogenetic band: 15q22.31 HGNC cytogenetic band: 15q21-q22 PPIB Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 15 GeneLoc Exon Structure
GeneLoc location for GC15M064448: view genomic region
(about GC identifiers )
Start:
64,448,011 bp from pter
End:
64,455,404 bp from pter
Size:
7,394 bases
Orientation:
minus strand
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Proteinsfor PPIB gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: PPIB_HUMAN, P23284 (See
protein sequence )Recommended Name: Peptidyl-prolyl cis-trans isomerase B precursor Size : 216 amino acids; 23743 Da
Subunit : Interacts with DYM
Subcellular location : Endoplasmic reticulum lumen. Melanosome. Note=Identified by mass spectrometry in melanosomefractions from stage I to stage IV
Caution : It is uncertain whether Met-1 or Met-9 is the initiator
Sequence caution : Sequence=AAA52150.1; Type=Erroneous initiation;
3 PDB 3D structures from and Proteopedia for PPIB :1CYN (3D)
  3ICH (3D)
  3ICI (3D)
 
Secondary accessions : A8K534 Q6IBH5 Q9BVK5Explore the universe of human proteins at neXtProt for PPIB: NX_P23284 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P23284 4/10 DME Specific Peptides for PPIB (P23284 ) (see all 10 )PPIB Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_000933.1 ENSEMBL proteins: ENSP00000300026 Reactome Protein details: P23284 Human Recombinant Protein Products: Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view) : About this table
PPIB for ontologies About GeneDecksing PPIB Antibody Products: Assay Products for PPIB:
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Protein
Domains / Familiesfor PPIB gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PPIB for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P23284 ProtoNet protein and cluster: P23284
1 Blocks protein family : IPB002130 Peptidyl-prolyl cis-trans isomerase UniProtKB/Swiss-Prot: PPIB_HUMAN, P23284 Similarity : Belongs to the cyclophilin-type PPIase family. PPIase B subfamilySimilarity : Contains 1 PPIase cyclophilin-type domain
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Functionfor PPIB gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: PPIB_HUMAN, P23284 Function : PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidicpeptide bonds in oligopeptides Catalytic activity : Peptidylproline (omega=180) = peptidylproline (omega=0)Enzyme regulation : Cyclosporin A (CsA) inhibits CYPB
Genatlas biochemistry entry for PPIB : peptidyl-propyl isomerase B Enzyme Number (IUBMB): EC 5.2.1.8 1 2 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PPIB (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PPIBOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: PPIB (NM_000942 ) Sino Biological Human cDNA Clone for PPIB DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PPIB Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PPIB
Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view) : About this table
PPIB for ontologies About GeneDecksing 3 GenomeRNAi human phenotypes for PPIB :Animal Models: Mouse knock-out Ppib tm1.1Rjb for PPIB 5 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Ppib) :
PPIB for phenotypes About GeneDecksing
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Pathways & Interactionsfor PPIB gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Collagen formation 2 BAFF in B-Cell Signaling 3 Syndecan-1-mediated signaling events 4 Development_Prolactin receptor signaling
Pathway sources See GeneCards unified pathways Show all pathways 1 EMD Millipore Pathway for PPIB 1 GeneGo (Thomson Reuters) Pathway for PPIB 2 BioSystems Pathways for PPIB 3
Reactome Pathways for PPIB
PPIB for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PPIB STRING Interaction
Network Preview (showing 5 interactants - click image to see 23)5/55 Interacting proteins for PPIB (P23284 2 , 3 ENSP00000300026 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 55 )About this table Gene Ontology (GO): 3 biological process terms (GO ID links to tree view) : About this table
PPIB for ontologies About GeneDecksing
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Drugs & Compoundsfor PPIB gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
PPIB for compounds About GeneDecksing Browse Tocris compounds for PPIB 1 HMDB Compound for PPIB About this table 2 DrugBank Compounds for PPIB About this table 5 Novoseek chemical compound relationships for PPIB gene About this table
Search CenterWatch for drugs/clinical trials and news about PPIB
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Transcriptsfor PPIB gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for PPIB gene: NM_000942.4 Unigene Cluster for PPIB:
Peptidylprolyl isomerase B (cyclophilin B) Hs.434937 [show with all ESTs ] Unigene Representative Sequence: BQ049986 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000300026 (uc002and.3 ) ENST00000558492 ENST00000561048 (uc010bgx.1 )Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PPIB (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PPIBOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: PPIB (NM_000942 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PPIB Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PPIB
Additional cDNA sequence: AK291149.1 AK311074.1 BC001125.2 BC008848.2 BC020800.1 BC032138.2 CR456829.1 M60457.1 M60857.1 M63573.1
24/30 DOTS entries (see all 30 ): DT.95344633 DT.100845917
DT.119195 DT.95352178 DT.100845915 DT.100845910 DT.95352206 DT.101985571 DT.97784070 DT.100845912 DT.100845914 DT.100845919 DT.95237355 DT.100845913 DT.121023162 DT.121023414 DT.92068163 DT.92457228 DT.95352171 DT.121023234 DT.121023413 DT.121023420 DT.92457220 DT.95147920 24/953 AceView cDNA sequences (see all 953 ):
CF552399 AJ712593 BP338061 BM831044 BM741113 BM785350 BM802364 BM756176 BM969712 BM781952 BM830826 BM848965 BI768795 BX335040 BU507664 BQ637087 BM503216 BM848839 BM747383 CA843061 BI823156 BU623904 BM825548 BQ439218 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for PPIB About this scheme ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b SP1 :           -         SP2 :       -     -         SP3 :                  
ECgene alternative splicing isoforms for PPIB
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Expression for PPIB gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section PPIB expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GACTCACTTT
About this image PPIB expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See PPIB Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PPIB SOURCE GeneReport for Unigene cluster: Hs.434937 SABiosciences Custom PCR Arrays for PPIB Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PPIBBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat PPIB QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PPIB QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PPIB
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Orthologsfor PPIB gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for PPIB gene from 9/36 species (see all 36 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
PPIB1
peptidylprolyl isomerase B (cyclophilin B)
80.84(n) 86.47(a)
 
396447 NM_205461.1 NP_990792.1
lizard (Anolis carolinensis)
Reptilia
PPIB6
--
83(a)
1 ↔ 1
GL343490.1(417575-422070)
African clawed frog (Xenopus laevis)
Amphibia
ppib-prov2
peptidylprolyl isomerase B
76.63(n)
 
BC054168.1
zebrafish (Danio rerio)
Actinopterygii
wufa97f082
Danio rerio cDNA clone MGC73214 IMAGE4790964, complete more
79.36(n)
 
BC059560.1
fruit fly (Drosophila melanogaster)
Insecta
CG28521 , 3
peptidyl-prolyl cis-trans isomerase3 CG28521
73(a) (best of 2)3 68.17(n) 1 67.5(a) 1
 
58F33 37591 1 NM_137851.3 1 NP_611695.1 1
worm (Caenorhabditis elegans)
Secernentea
cyp-53 cyn-51
cyclophillin3 Protein CYN-51
71(a) (best of 4)3 63.35(n) 1 67.66(a) 1
 
I(15048595-15049564)3 173374 1 NM_061223.4 1 NP_493624.1 1
baker's yeast (Saccharomyces cerevisiae)
Saccharomycetes
CPR5(YDR304C)4 CPR51
Peptidyl-prolyl cis-trans isomerase (cyclophilin) of more 4 Cpr5p1
55.85(n) 1 56.38(a) 1
 
4(1072557-1071880) 4 851898 1, 4 NP_010590.3 1 NP_010590.1 4
thale cress (Arabidopsis thaliana)
eudicotyledons
AT3G559201
peptidyl-prolyl cis-trans isomerase
61.62(n) 65.45(a)
 
824758 NM_115450.3 NP_567029.1
rice (Oryza sativa)
Liliopsida
AK104772.12
--
75.26(n)
 
AK104772.1
ENSEMBL Gene Tree for PPIB (if available)TreeFam Gene Tree for PPIB (if available)
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Paralogsfor PPIB gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for PPIB gene CWC27 2 PPIL4 2 PPWD1 2 PPIL3 2 PPIH 2 PPIC 2 PPIL1 2 PPIL2 2 18/22 SIMAP similar genes for PPIB using alignment to 1 protein entry: PPIB_HUMAN (see all similar genes ):PPIC PPIA PPIE PPIF PPIH LOC402252 RANBP2 PPIL1 PPID PPIAL4A PPIAL4B PPIAL4C PPIAL4G PPIG NKTR PPWD1 PPIL3 PPIL6
PPIB for paralogs About GeneDecksing
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Genomic Variantsfor PPIB gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 15 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for PPIB (64448011 - 64455404 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for PPIB: -- Human Gene Mutation Database (HGMD) : PPIB Locus Specific Mutation Databases (LSDB): PPIB SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PPIB
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Disorders
/ Diseasesfor PPIB gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
PPIB for disorders About GeneDecksing OMIM gene information: 123841 OMIM disorders : 259440 UniProtKB/Swiss-Prot: PPIB_HUMAN, P23284
Defects in PPIB are the cause of osteogenesis imperfecta type 9 (OI9) [MIM:259440]. OI9 is a connective tissue disorder characterized by bone fragility, low bone mass and bowing of limbs due to multiple fractures. Short limb dwarfism and blue sclerae are observed in some but not all patients 19 diseases for PPIB : About MalaCards osteogenesis imperfecta osteogenesis imperfecta type 9 dentinogenesis imperfecta connective tissue disease syphilis dwarfism nephrotic syndrome multiple myeloma hepatitis c encephalitis myeloma hepatocellular carcinoma breast cancer ataxia hepatitis immunodeficiency carcinoma pancreatitis malaria 1 disease from the University of Copenhagen DISEASES database for PPIB :Osteogenesis imperfecta Human Genome Epidemiology (HuGE) Navigator: PPIB (1 document)Export disorders for PPIB gene to outside databases
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Publicationsfor PPIB gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for PPIB gene, integrated from 9 sources (see all 110 ) (see top 10 ): (articles sorted by number of sources associating them with PPIB) Utopia : connect your pdf to the dynamic world of online information
Human cyclophilin B: a second cyclophilin gene encodes a peptidyl- prolyl isomerase with a signal sequence. (PubMed id 2000394) 1 , 2 , 3, 9 Price E.R....Walsh C.T. (1991) Lack of cyclophilin B in osteogenesis imperfecta with normal collagen folding. (PubMed id 20089953) 1 , 2 , 3, 9 Barnes A.M....Marini J.C. (2010) PPIB mutations cause severe osteogenesis imperfecta. (PubMed id 19781681) 1 , 2 , 9 van Dijk F.S.... Pals G. (2009) A novel secreted cyclophilin-like protein (SCYLP). (PubMed id 2040592) 1 , 2 , 9 Spik G.... Movva N.R. (1991) Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. (PubMed id 17081065) 1 , 2 Chi A....Hunt D.F. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) X-ray structure of a cyclophilin B/cyclosporin complex: comparison with cyclophilin A and delineation of its calcineurin-binding domain. (PubMed id 8197205) 1 , 2 Mikol V.... Walkinshaw M.D. (1994) S-cyclophilin is retained intracellularly via a unique COOH-terminal sequence and colocalizes with the calcium storage protein calreticulin. (PubMed id 1530944) 1 , 2 Arber S.... Caroni P. (1992) Microsequences of 145 proteins recorded in the two-dimensional gel protein database of normal human epidermal keratinocytes. (PubMed id 1286667) 1 , 2 Rasmussen H.H....Vandekerckhove J. (1992) An endoplasmic reticulum-specific cyclophilin. (PubMed id 1710767) 1 , 2 Hasel K.W.... Sutcliffe J.G. (1991) Distribution of cyclophilin B-binding sites in the subsets of human peripheral blood lymphocytes. (PubMed id 9378502) 1 , 9 Denys A....Spik G. (1997) The human TRPV6 channel protein is associated with cyclophilin B in human placenta. (PubMed id 18445599) 1 , 9 Stumpf T....Fecher-Trost C. (2008) Expression of cyclophilin B is associated with malignant progression and regulation of genes implicated in the pathogenesis of breast cancer. (PubMed id 19056847) 1 , 9 Fang F....Clevenger C.V. (2009) Receptor type I and type II binding regions and the peptidyl-prolyl isomerase site of cyclophilin B are required for enhancement of T-lymphocyte adhesion to fibronectin. (PubMed id 11955071) 1 , 9 Carpentier M....Spik G. (2002) Selective assay for CyPA and CyPB in human blood using highly specific anti-peptide antibodies. (PubMed id 7829860) 1 , 9 Allain F....Spik G. (1995) Synthesis of heparan sulfate with cyclophilin B-bindi ng properties is determined by cell type-specific expression of sulfotransferas es. (PubMed id 19940140) 1 , 9 Deligny A....Allain F. (2010) The heparin/heparan sulfate sequence that interacts with cyclophilin B contains a 3-O-sulfated N-unsubstituted glucosamine residue. (PubMed id 17588944) 1 , 9 Vanpouille C....Allain F. (2007) Characterization of surface binding sites for cyclophilin B on a human tumor T-cell line. (PubMed id 8206968) 1 , 9 Allain F....Spik G. (1994) Cyclophilin B induces integrin-mediated cell adhesion by a mechanism involving CD98-dependent activation of protein kinase C-delta and p44/42 mitogen-activated protein kinases. (PubMed id 18054915) 1 , 9 Melchior A....Allain F. (2008) CD147 is a signaling receptor for cyclophilin B. (PubMed id 11688976) 1 , 9 Yurchenko V....Bukrinsky M. (2001) The hydrophobic pocket of cyclophilin is the binding site for the human immunodeficiency virus type 1 Gag polyprotein. (PubMed id 9032343) 1 , 9 Braaten D....Luban J. (1997) Spatiotemporal behavior of nuclear cyclophilin B indic ates a role in RNA transcription. (PubMed id 22426501) 1 Dieriks B. and Van Oostveldt P. (2012) A census of human soluble protein complexes. (PubMed id 22939629) 1 Havugimana P.C....Emili A. (2012) Cyclophilin B attenuates the expression of TNF-a in li popolysaccharide-stimulated macrophages through the induction of B cell lymphoma -3. (PubMed id 22798670) 1 Marcant A....Allain F. (2012) A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883) 1 Kristensen A.R....Foster L.J. (2012) Comparing human pancreatic cell secretomes by in vitro aptamer selection identifies cyclophilin B as a candidate pancreatic cancer bio marker. (PubMed id 22484812) 1 Ray P....White R.R. (2012) Host cell interactome of HIV-1 Rev includes RNA helica ses involved in multiple facets of virus production. (PubMed id 22174317) 1 Naji S....Gerace L. (2012) Release of overexpressed CypB activates ERK signaling through CD147 binding for hepatoma cell resistance to oxidative stress. (PubMed id 22555451) 1 Kim K....Choe W. (2012) A major prolactin-binding complex on human milk fat gl obule membranes contains cyclophilins A and B: the complex is not the prolactin receptor. (PubMed id 22205628) 1 Lorenson M.Y....Walker A.M. (2012) Involvement of cyclophilin B in the replication of Ja panese encephalitis virus. (PubMed id 21281954) 1 Kambara H....Matsuura Y. (2011) Initial characterization of the human central proteome. (PubMed id 21269460) 2 Burkard T.R.... Colinge J. (2011) A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473) 1 Wagner S.A....Choudhary C. (2011) Synthesis, maturation, and trafficking of human Na+-d icarboxylate cotransporter NaDC1 requires the chaperone activity of cyclophilin B. (PubMed id 21257749) 1 Bergeron M.J....Hediger M.A. (2011) Proliferating cell nuclear antigen (PCNA)-associated KIAA0101/PAF15 protein is a cell cycle-regulated anaphase-promoting complex/cyc losome substrate. (PubMed id 21628590) 1 Emanuele M.J....Elledge S.J. (2011) Characterization of ubiquitination dependent dynamics in growth factor receptor signaling by quantitative proteomics. (PubMed id 21956701) 1 Akimov V....Blagoev B. (2011) Dymeclin, the gene underlying Dyggve-Melchior-Clausen syndrome, encodes a protein integral to extracellular matrix and golgi organiz ation and is associated with protein secretion pathways critical in bone develo pment. (PubMed id 21280149) 2 Denais C....Machado R.D. (2011) Mutations in PPIB (cyclophilin B) delay type I procol lagen chain association and result in perinatal lethal to moderate osteogenesis imperfecta phenotypes. (PubMed id 21282188) 1 Pyott S.M....Byers P.H. (2011) Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983) 1 Kim W....Gygi S.P. (2011) An important role for CDK2 in G1 to S checkpoint activation and DNA damage response in human embryonic stem cells. (PubMed id 21319273) 1 Neganova I....Lako M. (2011) Cyclosporin A associated helicase-like protein facili tates the association of hepatitis C virus RNA polymerase with its cellular cyc lophilin B. (PubMed id 21559518) 1 Morohashi K....Sugawara F. (2011) Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048) 1 Danielsen J.M....Nielsen M.L. (2011) Role of cyclophilin B in tumorigenesis and cisplatin resistance in hepatocellular carcinoma in humans. (PubMed id 21748762) 1 Kim Y....Kim S.S. (2011) Systematic analysis of human protein complexes identi fies chromosome segregation proteins. (PubMed id 20360068) 1 Hutchins J.R....Peters J.M. (2010) Cyclophilin B as a co-regulator of prolactin-induced gene expression and function in breast cancer cells. (PubMed id 20237142) 1 Fang F....Clevenger C.V. (2010) Cyclophilin B interacts with sodium-potassium ATPase and is required for pump activity in proximal tubule cells of the kidney. (PubMed id 21085665) 1 SuA+Ac G....Meseguer A. (2010) Structural basis of cyclophilin B binding by the caln exin/calreticulin P-domain. (PubMed id 20801878) 1 Kozlov G....Gehring K. (2010) Hepatitis C virus NS5A protein is a substrate for the peptidyl-prolyl cis/trans isomerase activity of cyclophilins A and B. (PubMed id 19297321) 1 Hanoulle X....Lippens G. (2009) Defining the human deubiquitinating enzyme interactio n landscape. (PubMed id 19615732) 1 Sowa M.E....Harper J.W. (2009) Cyclophilins contribute to Stat3 signaling and surviv al of multiple myeloma cells. (PubMed id 19503092) 1 Bauer K....Horn F. (2009) Identification of host proteins required for HIV infe ction through a functional genomic screen. (PubMed id 18187620) 1 Brass A.L....Elledge S.J. (2008) Large-scale mapping of human protein-protein interactions by mass spectrometry. (PubMed id 17353931) 1 Ewing R.M.... Figeys D. (2007) 14-3-3sigma controls mitotic translation to facilitate cytokinesis. (PubMed id 17361185) 1 Wilker E.W....Yaffe M.B. (2007) A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. (PubMed id 16713569) 1 Lim J.... Zoghbi H.Y. (2006) How many drug targets are there? (PubMed id 17139284) 7 Overington J.P....Hopkins A.L. (2006) Analysis of the DNA sequence and duplication history of human chromosome 15. (PubMed id 16572171) 2 Zody M.C....Nusbaum C. (2006) Drugs, their targets and the nature and number of dru g targets. (PubMed id 17016423) 7 Imming P....Meyer A. (2006) Cyclophilin B is a functional regulator of hepatitis C virus RNA polymerase. (PubMed id 15989969) 1 Watashi K....Shimotohno K. (2005) Protein profiling of human pancreatic islets by two-dimensional gel electrophoresis and mass spectrometry. (PubMed id 15952740) 1 Ahmed M....Bergsten P. (2005) Nucleolar proteome dynamics. (PubMed id 15635413) 1 Andersen J.S....Mann M. (2005) A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070) 1 Stelzl U.... Wanker E.E. (2005) Role of cyclophilin B in activation of interferon regulatory factor-3. (PubMed id 15764595) 1 Obata Y....Matsuyama T. (2005) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 2 Ota T.... Sugano S. (2004) Identification of FHOD1-binding proteins and mechanisms of FHOD1-regulated actin dynamics. (PubMed id 15095401) 1 Westendorf J.J. and Koka S. (2004) Cyclophilin D, a component of the permeability transition-pore, is an apoptosis repressor. (PubMed id 14729611) 1 Schubert A. and Grimm S. (2004) Nascent lipidated apolipoprotein B is transported to the Golgi as an incompletely folded intermediate as probed by its association with network of endoplasmic reticulum molecular chaperones, GRP94, ERp72, BiP, calreticulin, and cyclophilin B. (PubMed id 12397072) 1 Zhang J. and Herscovitz H. (2003) Immunophilins and HIV-1 infection. (PubMed id 12181673) 1 Minder D....Gehring H. (2002) TTD: Therapeutic Target Database. (PubMed id 11752352) 7 Chen X....Chen Y.Z. (2002) Interaction with glycosaminoglycans is required for cyclophilin B to trigger integrin-mediated adhesion of peripheral blood T lymphocytes to extracellular matrix. (PubMed id 11867726) 1 Allain F....Spik G. (2002) A subset of chaperones and folding enzymes form multiprotein complexes in endoplasmic reticulum to bind nascent proteins. (PubMed id 12475965) 1 Meunier L....Hendershot L.M. (2002) The intranuclear prolactin/cyclophilin B complex as a transcriptional inducer. (PubMed id 11997457) 1 Rycyzyn M.A. and Clevenger C.V. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) Role of cyclophilin B in prolactin signal transduction and nuclear retrotranslocation. (PubMed id 10935542) 1 Rycyzyn M.A....Clevenger C.V. (2000) The Protein Data Bank. (PubMed id 10592235) 7 Berman H.M....Bourne P.E. (2000) Human cyclophilin has a significantly higher affinity for HIV-1 recombinant p55 than p24. (PubMed id 10096576) 1 Bristow R....Duncan J. (1999) Maturation-induced conformational changes of HIV-1 capsid protein and identification of two high affinity sites for cyclophilins in the C-terminal domain. (PubMed id 10026140) 1 Endrich M.M....Gehring H. (1999) The V3 loop of human immunodeficiency virus type-1 envelope protein is a high-affinity ligand for immunophilins present in human blood. (PubMed id 9546659) 1 Endrich M.M. and Gehring H. (1998) Native recombinant cyclophilins A, B, and C degrade DNA independently of peptidylprolyl cis-trans-isomerase activity. Potential roles of cyclophilins in apoptosis. (PubMed id 9045699) 1 Montague J.W....Cidlowski J.A. (1997) Construction of a human full-length cDNA bank. (PubMed id 7821789) 1 Kato S....Aoki T. (1994) Calcium signalling in T cells stimulated by a cyclophilin B-binding protein. (PubMed id 7522304) 1 Bram R.J. and Crabtree G.R. (1994) Cyclophilin B trafficking through the secretory pathway is altered by binding of cyclosporin A. (PubMed id 7909608) 1 Price E.R....McKeon F.D. (1994) Human immunodeficiency virus type 1 Gag protein binds to cyclophilins A and B. (PubMed id 8513493) 1 Luban J.... Goff S.P. (1993) Somatic cell mapping of the human cyclophilin B gene (PPIB) to chromosome 15. (PubMed id 1505219) 1 Peddada L.B....Deans R.J. (1992) Evidence that human milk isolated cyclophilin B corresponds to a truncated form. (PubMed id 8652625) 9 Mariller C....Spik G. (1996) Octasaccharide is the minimal length unit required for efficient binding of cyclophilin B to heparin and cell surface heparan sulphate. (PubMed id 15109301) 9 Vanpouille C....Allain F. (2004) Receptor-mediated transcytosis of cyclophilin B through the blood-brain barrier. (PubMed id 10386979) 9 Carpentier M....Spik G. (1999) Enhancing the effect of secreted cyclophilin B on immunosuppressive activity of cyclosporine. (PubMed id 9583869) 9 Denys A....Spik G. (1998) Cyclophilin B binding to platelets supports calcium-dependent adhesion to collagen. (PubMed id 10419889) 9 Allain F....Spik G. (1999) Hsp47 and cyclophilin B traverse the endoplasmic reticulum with procollagen into pre-Golgi intermediate vesicles. A role for Hsp47 and cyclophilin B in the export of procollagen from the endoplasmic reticulum. (PubMed id 7629154) 9 Smith T....Sauk J.J. (1995) Severe osteogenesis imperfecta in cyclophilin B-defic ient mice. (PubMed id 19997487) 9 Choi J.W....Bram R.J. (2009) Involvement of the N-terminal part of cyclophilin B in the interaction with specific Jurkat T-cell binding sites. (PubMed id 8713087) 9 Mariller C....Spik G. (1996) Overexpressed cyclophilin B suppresses apoptosis associated with ROS and Ca2+ homeostasis after ER stress. (PubMed id 18946027) 9 Kim J....Kim S.S. (2008) Target cell cyclophilins facilitate human papillomavi rus type 16 infection. (PubMed id 19629175) 9 Bienkowska-Haba M....Sapp M. (2009) Cyclophilin B mediates cyclosporin A incorporation in human blood T-lymphocytes through the specific binding of complexed drug to the cell surface. (PubMed id 8713086) 9 Allain F....Spik G. (1996) Basic fibroblast growth factor induces 3T3 fibroblasts to synthesize and secrete a cyclophilin-like protein and beta 2-microglobulin. (PubMed id 1932134) 9 Davis T.R....Nilsen-Hamilton M. (1991) Recessive osteogenesis imperfecta caused by LEPRE1 mutations: clinical documentation and identification of the splice form responsible for prolyl 3-hydroxylation. (PubMed id 19088120) 9 Willaert A....De Paepe A. (2009) Syndecan-1/CD147 association is essential for cyclophilin B-induced activation of p44/42 mitogen-activated protein kinases and promotion of cell adhesion and chemotaxis. (PubMed id 17267519) 9 Pakula R....Allain F. (2007) Identification of homologs for thioredoxin, peptidyl prolyl cis-trans isomerase, and glycerophosphodiester phosphodiesterase in outer membrane fractions from Treponema pallidum, the syphilis spirochete. (PubMed id 9317025) 9 Shevchenko D.V....Radolf J.D. (1997) Prolyl 3-hydroxylase 1 and CRTAP are mutually stabili zing in the endoplasmic reticulum collagen prolyl 3-hydroxylation complex. (PubMed id 19846465) 9 Chang W....Marini J.C. (2010) Commonly used reference genes are actively regulated in in vitro stimulated lymphocytes. (PubMed id 17257226) 9 Roge R....Carstens J. (2007) High level expression and characterization of the cyclophilin B gene from the anaerobic fungus Orpinomyces sp. strain PC-2. (PubMed id 17018017) 9 Chen H....Cerniglia C.E. (2006) Isolation of a new cyclophilin-like protein from chickpeas with mitogenic, antifungal and anti-HIV-1 reverse transcriptase activities. (PubMed id 11848297) 9 Ye X.Y. and Ng T.B. (2002) Isolation of unguilin, a cyclophilin-like protein with anti-mitogenic, antiviral, and antifungal activities, from black-eyed pea. (PubMed id 11732686) 9 Ye X.Y. and Ng T.B. (2001) Delineation of the calcineurin-interacting region of cyclophilin B. (PubMed id 11206060) 9 Carpentier M....Spik G. (2000)
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PharmGKB entry for PPIB Pharmacogenomics, SNPs, Pathways NIEHS-SNPs http://egp.gs.washington.edu/data/ppib/ Osteogenesis imperfecta variant database http://oi.gene.le.ac.uk/home.php?select_db=PPIB
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About This Section Patent Information for PPIB gene: Search GeneIP for patents involving PPIB GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PPIB gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
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