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PPIAL4G Gene

protein-coding GIFtS: 33
GCID: GC01M143767

Peptidylprolyl Isomerase A (Cyclophilin A)-Like 4G

Search for PPIAL4G
at

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(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, ¹⁰fRNAdb, ¹²H-InvDB, ¹³NCBI, ¹⁴NONCODE, and/or ¹⁵RNAdb)
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Aliases
Peptidylprolyl Isomerase A (Cyclophilin A)-Like 4G¹ ²		Peptidyl-Prolyl Cis-Trans Isomerase A-Like 4G²
Peptidylprolyl Cis-Trans Isomerase A-Like 4² ³		Peptidylprolyl Cis-Trans Isomerase A-Like 4A²
PPIase A-Like 4G² ³		Peptidylprolyl Cis-Trans Isomerase A-Like 4G²
COAS-2²		PPIase A-Like 4A²
Chromosome 1-Amplified Sequence 2²		EC 5.2.1.8³

External Ids:	HGNC: 33996¹	Entrez Gene: 644591²	Ensembl: ENSG00000236334⁷	UniProtKB: A2BFH1³

Export aliases for PPIAL4G gene to outside databases

Previous GC identifer: GC01M142557

(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for PPIAL4G Gene:

PPIAL4G (peptidylprolyl isomerase A (cyclophilin A)-like 4G) is a protein-coding gene. GO annotations related to this gene include peptidyl-prolyl cis-trans isomerase activity. An important paralog of this gene is PPIE.

UniProtKB/Swiss-Prot: PAL4G_HUMAN, A2BFH1

Function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic

peptide bonds in oligopeptides (By similarity)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence:

NC_000001.11 NC_018912.2 NT_004487.20

Regulatory elements:

Regulatory transcription factor binding sites in the PPIAL4G gene promoter:
NF-1 NF-1/L HOXA3 C/EBPalpha PPAR-alpha POU2F1 Nkx6-1 POU2F1a ZIC2/Zic2
Other transcription factors

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Epigenetics:

DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat PPIAL4G

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1q21.1 Ensembl cytogenetic band: 1q21.1 HGNC cytogenetic band: 1q21.1

PPIAL4G Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PPIAL4G gene location

GeneLoc information about chromosome 1 GeneLoc Exon Structure

GeneLoc location for GC01M143767: view genomic region (about GC identifiers)

Start:	143,767,144 bp from pter	End:	143,767,881 bp from pter
Size:	738 bases	Orientation:	minus strand

(According to ¹UniProtKB, HORDE, ²neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
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UniProtKB/Swiss-Prot: PAL4G_HUMAN, A2BFH1 (See protein sequence)

Recommended Name: Peptidyl-prolyl cis-trans isomerase A-like 4G

Size: 164 amino acids; 18166 Da

Miscellaneous: It is one of seven related genes or pseudogenes found in a cluster, thought to result from gene

duplication, on chromosome 1

Secondary accessions: A1L431

Explore the universe of human proteins at neXtProt for PPIAL4G: NX_A2BFH1

Explore proteomics data for PPIAL4G at MOPED

Post-translational modifications:

Glycosylation² at Asn108

Modification sites at PhosphoSitePlus

See PPIAL4G Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

REFSEQ proteins: NP_001116540.1

ENSEMBL proteins:

ENSP00000393845

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(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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3 InterPro protein domains:

IPR002130 Cyclophilin-type_PPIase_dom

IPR024936 Cyclophilin-type_PPIase

IPR020892 Cyclophilin-type_PPIase_CS

Graphical View of Domain Structure for InterPro Entry A2BFH1

ProtoNet protein and cluster: A2BFH1

UniProtKB/Swiss-Prot: PAL4G_HUMAN, A2BFH1

Similarity: Belongs to the cyclophilin-type PPIase family. PPIase A subfamily

Similarity: Contains 1 PPIase cyclophilin-type domain

PPIAL4G for domains About GeneDecksing

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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Molecular Function:

UniProtKB/Swiss-Prot Summary: PAL4G_HUMAN, A2BFH1

Function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic

peptide bonds in oligopeptides (By similarity)

Catalytic activity: Peptidylproline (omega=180) = peptidylproline (omega=0)

Enzyme Number (IUBMB): EC 5.2.1.8¹

Gene Ontology (GO): 1 molecular function term: About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEA	--

PPIAL4G for ontologies About GeneDecksing

Animal Models:

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(According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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Subcellular locations from UniProtKB/Swiss-Prot

PAL4G_HUMAN, A2BFH1: Cytoplasm (By similarity)

Gene Ontology (GO): 1 cellular component term: About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005737	cytoplasm	IEA	--

PPIAL4G for ontologies About GeneDecksing

(SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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Custom Pathway & Disease-focused RT² Profiler PCR Arrays for PPIAL4G
Interactions:

Search GeneGlobe Interaction Network for PPIAL4G

STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

Selected Interacting proteins for PPIAL4G (ENSP00000393845⁴) via UniProtKB, MINT, STRING, and/or I2D (see all 27)

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
PIN1	ENSP00000247970⁴	STRING: ENSP00000247970
RAD21	ENSP00000297338⁴	STRING: ENSP00000297338
SOD2	ENSP00000337127⁴	STRING: ENSP00000337127
SETD2	ENSP00000386759⁴	STRING: ENSP00000386759
SGK1	ENSP00000356832⁴	STRING: ENSP00000356832

About this table

Gene Ontology (GO): 1 biological process term: About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0006457	protein folding	IEA	--

PPIAL4G for ontologies About GeneDecksing

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
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REFSEQ mRNAs for PPIAL4G gene:

NM_001123068.1

Unigene Cluster for PPIAL4G:

Peptidylprolyl isomerase A (cyclophilin A)-like 4G

Hs.534674

Unigene Representative Sequence: NM_001123068

1 Ensembl transcript including schematic representation, and UCSC links where relevant:

ENST00000419275(uc001ejt.3)

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Additional mRNA sequence:

BC130376.1 BC130378.1

1 DOTS entry:

DT.100039874

GeneLoc Exon Structure

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE ¹MOPED, ²PaxDb, and ³MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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PPIAL4G expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>^2/3
CGAP TAG: --

About this image

PPIAL4G Protein expression data from MOPED¹, PaxDb² and MaxQB³:

About this image

PPIAL4G Protein Expression

SOURCE GeneReport for Unigene cluster: Hs.534674

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(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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This gene was present in the common ancestor of animals.

Orthologs for PPIAL4G gene from Selected species (see all 11) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
chicken (Gallus gallus)	Aves	PPIA⁶	peptidyl-prolyl cis-trans isomerase A	80(a)	1 → many	22(4060940-4061857)
lizard (Anolis carolinensis)	Reptilia	--	--	78(a)	1 → many	GL343238.1(667038-675712)
zebrafish (Danio rerio)	Actinopterygii	PPIA⁶	peptidylprolyl isomerase A (cyclophilin A)	1(a)	1 → many	9(399379-423700) ENSDARG00000093125
fruit fly (Drosophila melanogaster)	Insecta	CG5071⁶	--	6(a)	1 → many	3R(21444136-21446401)
worm (Caenorhabditis elegans)	Secernentea	T22F3.12⁶ Y17G9B.4⁶	Protein Y17G9B.4 (Y17G9B.4) mRNA, complete cds	41(a) 20(a)	many ↔ many many ↔ many	V(3589029-3592199) WBGene00044705 IV(4752094-4753230) WBGene00021201

Species with no ortholog for PPIAL4G

ENSEMBL Gene Tree for PPIAL4G (if available)
TreeFam Gene Tree for PPIAL4G (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
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Paralogs for PPIAL4G gene

PPIAL4C¹ ² PPIAL4B¹ ² PPIAL4F PPIAL4E PPIAL4D¹ ² PPIE² RANBP2² RGPD6²

PPIF² PPIA² PPIAL4A² RGPD2² RGPD4² RGPD3² RGPD1² RGPD5²

RGPD8²

Selected SIMAP similar genes for PPIAL4G using alignment to 1 protein entry: PAL4G_HUMAN(see all similar genes):

PPIAL4A PPIAL4B PPIAL4C PPIAL4D PPIA LOC402252

PPIF RANBP2 PPIE PPIC PPIB PPID

PPIH PPIL1 PPIL6 DKFZp686G0426 NKTR CWC27

PPIAL4G for paralogs About GeneDecksing

2 Pseudogenes.org Pseudogenes for PPIAL4G
PGOHUM00000234654 PGOHUM00000235579

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, ⁴UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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SNP ID	Valid	Clinical significance	Chr 1 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs200645759^1,2	C	--	143767235(+)	`AAAGGA/GAACTG`	1	--	ut3¹		0	--	--	--	--
rs201606684^1,2	C	--	143767254(+)	`GCACAA/GAGATT`	1	--	ut3¹		0	--	--	--	--
rs200637303^1,2	C,F	--	143767312(+)	`CAGAAG/TGAATG`	1	--	ut3¹		1		EU	179
rs201648411^1,2	C	--	143767357(+)	`CATTAG/CAATTG`	2	/F /L	mis¹		1		EU	1177
rs77641628^1,2	C,F	--	143767466(+)	`CAAAGG/ACCACA`	2	/A /V	mis¹		2		NA EU	963
rs6604511^1,2	C,F,A	--	143767513(+)	`ATGAAT/AAACTG`	2	/L /F	mis¹		2		NA	6
rs6604512^1,2	C,F,A	--	143767522(+)	`TGGGAA/GCCATT`	2	G	syn¹		3		NA	8
rs2490183^1,2	C	--	143767547(+)	`CATTTA/GCCATG`	2	A V	mis¹		0	--	--	--	--
rs6604514^1,2	C,F,A	--	143767628(+)	`TGTCAC/TCGGTG`	2	D G	mis¹		1		EU	359
rs12407726^1,2	C,F,H	--	143767629(+)	`GTCACC/TGGTGC`	2	S G	mis¹		4		NS NA EU	1607

HapMap Linkage Disequilibrium report for PPIAL4G (143767144 - 143767881 bp)

Structural Variations
Database of Genomic Variants (DGV) 1 variation for PPIAL4G: About this table

Variant ID	Type	Subtype	PubMed ID
esv27827	CNV	Gain	19812545

Site Specific Mutation Identification with PCR Assays

Search QIAGEN SeqTarget long-range PCR primers for resequencing PPIAL4G

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
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PubMed articles for PPIAL4G gene integrated from 10 sources:
(articles sorted by number of sources associating them with PPIAL4G)

Utopia: connect your pdf to the dynamic
world of online information

The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)² Gregory S.G.... Bentley D.R. (Nature 2006)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)² Gerhard D.S.... Malek J. (Genome Res. 2004)
Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)¹ Ota T.... Sugano S. (Nat. Genet. 2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002)

(in PubMed, OMIM, and NCBI Bookshelf)
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		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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Entrez Gene: 644591	HGNC: 33996	Ensembl:ENSG00000236334	euGenes: HUgn644591	ECgene: PPIAL4G
H-InvDB: PPIAL4G

(According to HUGE)
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(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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Name	Description
PharmGKB entry for PPIAL4G	Pharmacogenomics, SNPs, Pathways

Intellectual Property for PPIAL4G gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

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Patent Information for PPIAL4G gene:
Search GeneIP for patents involving PPIAL4G

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
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	Block miRNA regulation of human, mouse, rat PPIAL4G using miScript Target Protectors		SeqTarget long-range PCR primers for resequencing PPIAL4G
	DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat PPIAL4G		Predesigned siRNA for gene silencing in human, mouse, rat PPIAL4G
	QuantiFast Probe-based Assays in human, mouse, rat PPIAL4G		Search QuantiTect SYBR Green Assays in human, mouse, rat PPIAL4G
	Custom PCR Arrays for PPIAL4G		Search Chromatin IP Primers for PPIAL4G
	Pre-validated RT² qPCR Primer Assay in human, mouse / rat PPIAL4G		Search GeneGlobe Interaction Network for PPIAL4G
	Regulatory tfbs in PPIAL4G promoter

	GenScript Custom Purified and Recombinant Proteins Services for PPIAL4G		GenScript cDNA clones with any tag delivered in your preferred vector for PPIAL4G
	GenScript Custom Assay Services for PPIAL4G		GenScript Custom overexpressing Cell Line Services for PPIAL4G
	CloneReady with Over 120,000 Genes		Gene Synthesis: Any Gene in Any Vector
	Vector-based siRNA and miRNA, Ready for Transfection		Gene Mutant Library, Variants up to 10^11
	Plasmid Preparation		Custom Peptide Services

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	Novus Biologicals
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	Search for Antibodies for PPIAL4G at Abcam
	See all of Abcam's Antibodies, Kits and Proteins for PPIAL4G
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Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PPIAL4G

	Browse SwitchGear 3'UTR luciferase reporter plasmids for PPIAL4G
	Browse SwitchGear Promoter luciferase reporter plasmids for PPIAL4G

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Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat PPIAL4G

	inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for PPIAL4G
	inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for PPIAL4G

LSBio Antibodies in human, mouse, rat for PPIAL4G

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GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014

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Hot genes Disease genes PPIAL4G gene at Home site.

Version: 3.12.142 28 July 2014
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PPIAL4G Gene

Peptidylprolyl Isomerase A (Cyclophilin A)-Like 4G

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Export list of displayed genes

PPIAL4G Gene

Peptidylprolyl Isomerase A (Cyclophilin A)-Like 4G

Aliasesfor PPIAL4G gene

Summariesfor PPIAL4G gene

Genomic Viewsfor PPIAL4G gene

Proteinsfor PPIAL4G gene

PPIAL4G Human Recombinant Protein Products:

PPIAL4G Antibody Products:

PPIAL4G Assay Products:

Domains /Familiesfor PPIAL4G gene

Functionfor PPIAL4G gene

Localizationfor PPIAL4G gene

Pathways & Interactionsfor PPIAL4G gene

Drugs & Compoundsfor PPIAL4G gene

Transcriptsfor PPIAL4G gene

Expression for PPIAL4G gene

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Disorders / Diseasesfor PPIAL4G gene

Publicationsfor PPIAL4G gene

External Searches for PPIAL4G gene

Genome Databases showing PPIAL4G gene

Other Databases showing PPIAL4G gene

Specialized Databases showing PPIAL4G gene

Intellectual Propertyfor PPIAL4G gene

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Aliases
for PPIAL4G gene

Summaries
for PPIAL4G gene

Genomic Views
for PPIAL4G gene

Proteins
for PPIAL4G gene

Domains /
Families
for PPIAL4G gene

Function
for PPIAL4G gene

Localization
for PPIAL4G gene

Pathways & Interactions
for PPIAL4G gene

Drugs & Compounds
for PPIAL4G gene

Transcripts
for PPIAL4G gene

Expression
for PPIAL4G gene

Orthologs
for PPIAL4G gene

Paralogs
for PPIAL4G gene

Genomic Variants
for PPIAL4G gene

Disorders / Diseases
for PPIAL4G gene

Publications
for PPIAL4G gene

Intellectual Property
for PPIAL4G gene

Products
for PPIAL4G gene