PPARG Gene
protein-coding GIFtS : 72
GCID: GC03 P012328
peroxisome proliferator-activated receptor gamma (Previous names: peroxisome proliferative activated receptor, gamma )
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Aliasesfor PPARG gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Peroxisome Proliferator-Activated Receptor Gamma 1 2 CIMT12 5 NR1C31 2 3 GLM12 5 PPARG11 2 5 Peroxisome Proliferative Activated Receptor, Gamma1 PPARG21 2 5 Peroxisome Proliferator-Activated Nuclear Receptor Gamma Variant 12 PPARgamma1 2 Peroxisome Proliferator-Activated Receptor Gamma 12 Nuclear Receptor Subfamily 1 Group C Member 32 3 PPAR Gamma2 PPAR-Gamma1
Export aliases for PPARG gene to outside databases Previous GC identifers: GC03P012258 GC03P012304 GC03P012305 GC03P012263
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Summariesfor PPARG gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for PPARG : This gene encodes a member of the peroxisome proliferator-activated receptor (PPAR) subfamily of nuclear receptors. PPARs form heterodimers with retinoid X receptors (RXRs) and these heterodimers regulate transcription of various genes. Three subtypes of PPARs are known: PPAR-alpha, PPAR-delta, and PPAR-gamma. The protein encoded by this gene is PPAR-gamma and is a regulator of adipocyte differentiation. Additionally, PPAR-gamma has been implicated in the pathology of numerous diseases including obesity, diabetes, atherosclerosis and cancer. Alternatively spliced transcript variants that encode different isoforms have been described. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: PPARG_HUMAN, P37231 Function : Receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by aligand, the receptor binds to a promoter element in the gene for acyl-CoA oxidase and activates its transcription. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. Acts as a critical regulator of gut homeostasis by suppressing NF-kappa-B-mediated proinflammatory responses summary
for PPARG : Peroxisome proliferator-activated receptor gamma (PPARgamma) is a member of the nuclear receptor family ofligand-activated transcription factors that heterodimerize with the retinoic X receptor (RXR) to regulategene expression. PPARgamma is located primarily in the adipose tissue, lymphoid tissue, colon, liver andheart and is thought to regulate adipocyte differentiation and glucose homeostasis. PPARgamma has beenimplicated in the pathology of numerous diseases including obesity, diabetes, atherosclerosis and cancer.The human gene encoding PPARgamma has been localized to chromosome 3 (3p25). Gene Wiki entry for PPARG (Peroxisome proliferator-activated receptor gamma)
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Genomic Viewsfor PPARG gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000003.11 NC_018914.1 NT_022517.18 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PPARG gene promoter: CREB deltaCREB C/EBPalpha Other transcription factors Search SABiosciences Chromatin IP Primers for PPARG Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PPARG
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 3p25 Ensembl cytogenetic band: 3p25.2 HGNC cytogenetic band: 3p25 PPARG Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 3 GeneLoc Exon Structure
GeneLoc location for GC03P012328: view genomic region
(about GC identifiers )
Start:
12,328,867 bp from pter
End:
12,475,855 bp from pter
Size:
146,989 bases
Orientation:
plus strand
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Proteinsfor PPARG gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: PPARG_HUMAN, P37231 (See
protein sequence )Recommended Name: Peroxisome proliferator-activated receptor gamma Size : 505 amino acids; 57620 Da
Subunit : Forms a heterodimer with the retinoic acid receptor RXRA called adipocyte-specific transcription factor ARF6.Interacts with NCOA6 coactivator, leading to a strong increase in transcription of target genes. Interacts with coactivator PPARBP, leading to a mild increase in transcription of target genes. Interacts with FAM120B and PRDM16 (By similarity). Interacts with NOCA7 in a ligand-inducible manner. Interacts with NCOA1 and NCOA2 LXXLL motifs. Interacts with ASXL1, ASXL2, DNTTIP2, MAP2K1/MEK1, PDPK1, PRMT2 and TGFB1I1. Interacts (via DNA-binding domain) with HELZ2; the interaction stimulates the transcriptional activity of PPARG
Subcellular location : Nucleus. Cytoplasm. Note=Redistributed from the nucleus to the cytosol through aMAP2K1/MEK1-dependent manner
Sequence caution : Sequence=AAN38992.2; Type=Erroneous initiation; Note=Translation N-terminally extended;Sequence=BAA23354.1; Type=Erroneous gene model prediction; Sequence=BAF83270.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=CAA62153.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
6/114 PDB 3D structures from and Proteopedia for PPARG (see all 114 ):1FM6 (3D)
  1FM9 (3D)
  1I7I (3D)
  1K74 (3D)
  1KNU (3D)
  1NYX (3D)
 
Secondary accessions : A8K3G6 B5BUA1 O00684 O00710 O14515 Q0QJH8 Q15178 Q15179 Q15180 Q15832 Q86U60Q96J12 Alternative splicing : 3 isoforms : P37231-1 P37231-2 P37231-3 (Exhibits dominant negative activity over isoform 1)Explore the universe of human proteins at neXtProt for PPARG: NX_P37231 Post-translational modifications:
O-GlcNAcylation at Thr-84 reduces transcriptional activity in adipocytes (By similarity)1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P37231 PPARG Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (4 alternative transcripts):
NP_005028.4 NP_056953.2 NP_619725.2 NP_619726.2 ENSEMBL proteins: ENSP00000380205 ENSP00000380224 ENSP00000312472 ENSP00000380210 ENSP00000411931 ENSP00000380207 ENSP00000380221 ENSP00000392285 ENSP00000380196 ENSP00000287820 ENSP00000380218 ENSP00000380195 ENSP00000438940 Reactome Protein details: P37231 Human Recombinant Protein Products: Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view) : About this table
PPARG for ontologies About GeneDecksing PPARG Antibody Products: Assay Products for PPARG:
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Protein
Domains / Familiesfor PPARG gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PPARG for domains About GeneDecksing 5/8 InterPro domains/families (see all 8 ):
Graphical View of Domain Structure for InterPro Entry P37231 ProtoNet protein and cluster: P37231
3 Blocks protein families : IPB001723 Steroid hormone receptor signature IPB003074 Peroxisome proliferator-activated receptor (1C nuclear receptor) signature IPB003077 Peroxisome proliferator-activated receptor gamma signature UniProtKB/Swiss-Prot: PPARG_HUMAN, P37231 Similarity : Belongs to the nuclear hormone receptor family. NR1 subfamilySimilarity : Contains 1 nuclear receptor DNA-binding domain
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Functionfor PPARG gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: PPARG_HUMAN, P37231 Function : Receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by aligand, the receptor binds to a promoter element in the gene for acyl-CoA oxidase and activates its transcription. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. Acts as a critical regulator of gut homeostasis by suppressing NF-kappa-B-mediated proinflammatory responses Enzyme regulation : PDPK1 activates its transcriptional activity independently of its kinase activity
Genatlas biochemistry entry for PPARG : peroxisome proliferator-activated receptor,steroid/thyroid hormone coactivator receptor superfamily,heterodimerizing with RXR*,coactivated by SRCO1,expressed (isoform 1) in the diploid trophoblast lineages and required for placental development,expressed at low levels in preadipocytes,induced by CEBPB and CEBPD,coexpressed with and coregulated by PPARG,jointly required for full adipocyte differentiation and fat deposition with variability influencing plasma leptin levels in obese humans,modulator of insulin sensitivity and control of glucose homostasis and blood pressure and activation of antidiabetic effect of thiazolidinediones,negative regulator of macrophage activation,inhibiting production of monocyte inflammatory cytokines,increasing PAI1 expression in endothelial cells. Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PPARG (see all 8 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PPARG (see all 8 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 4 ): PPARG (NM_138712 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PPARG Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PPARG
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PPARG
Gene Ontology (GO): 5/18 molecular function terms (GO ID links to tree view) (see all 18 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0001012 RNA polymerase II regulatory region DNA binding
IEA -- GO:0003677 DNA binding
ISS -- GO:0003682 chromatin binding
IEA -- GO:0003700 sequence-specific DNA binding transcription factor activity
ISS -- GO:0003707 steroid hormone receptor activity
IEA --
PPARG for ontologies About GeneDecksing Animal Models: Mouse knock-outs for PPARG: Pparg tm1.2Mgn Pparg tm1Wwah Pparg tm2Avp Pparg tm1.2Gonz Pparg tm1Uls Pparg tm1.1Mtz Pparg tm1Tka 15/23 MGI mutant phenotypes (inferred from 26 alleles ) (MGI details for Pparg) (see all 23 ):
PPARG for phenotypes About GeneDecksing
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Pathways & Interactionsfor PPARG gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/25 super-pathways (see all 25 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Maintenance of PPARG Expression in Differentiated Adipocytes 2 Nuclear Receptor transcription pathway 3 Generic Transcription Pathway 4 G-protein signaling_Ras family GTPases in kinase cascades (scheme) 5 Development_Ligand-independent activation of ESR1 and ESR2
Pathway sources See GeneCards unified pathways Show all pathways 3 EMD Millipore Pathways for PPARG 1 R&D Systems Pathway for PPARG 1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for PPARG 1
Cell Signaling Technology (CST) Pathway for PPARG 1 Tocris Bioscience Pathway for PPARG 3 GeneGo (Thomson Reuters) Pathways for PPARG 5/9 BioSystems Pathways for PPARG (see all 9 ) 5/7
Reactome Pathways for PPARG (see all 7 )1 PharmGKB Pathway for PPARG 5
Kegg Pathways (Kegg details for PPARG) :
PPARG for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PPARG STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/148 Interacting proteins for PPARG (P37231 1 , 2 , 3 ENSP00000287820 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 148 )Interactant Interaction Details GeneCard External ID(s) PPARGC1A Q9UBK2 2 , 3 , ENSP00000264867 4 MINT-7229698 MINT-7229685 I2D:
score=2 STRING: ENSP00000264867 EDF1 O60869 1 , 3 , ENSP00000224073 4 EBI-781384,EBI-781301 I2D:
score=3 STRING: ENSP00000224073 CLU P10909 1 , 3 , ENSP00000315130 4 EBI-781384,EBI-1104674 I2D:
score=1 STRING: ENSP00000315130 MED1 Q15648 3 , ENSP00000300651 4 I2D:
score=5 STRING: ENSP00000300651 HDAC3 O15379 3 , ENSP00000302967 4 I2D:
score=4 STRING: ENSP00000302967
About this table Gene Ontology (GO): 5/63 biological process terms (GO ID links to tree view) (see all 63 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000122 negative regulation of transcription from RNA polymerase II promoter
ISS -- GO:0001890 placenta development
ISS -- GO:0002674 negative regulation of acute inflammatory response
IEA -- GO:0006351 transcription, DNA-dependent
-- -- GO:0006357 regulation of transcription from RNA polymerase II promoter
-- --
PPARG for ontologies About GeneDecksing
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Drugs & Compoundsfor PPARG gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
PPARG for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for PPARG
Compounds for PPARG available from Tocris Bioscience About this table Compound Action
CAS
# Troglitazone Selective PPARgamma agonist; antidiabetic agent [97322-87-7] GW 1929 hydrochloride Selective PPARgamma agonist. Orally active [196808-24-9] nTZDpa Potent, selective PPARgamma partial agonist [118414-59-8] T 0070907 Highly potent and selective PPARgamma antagonist [313516-66-4] Pioglitazone hydrochloride Selective PPARgamma agonist; antidiabetic agent [112529-15-4]
10/43 HMDB Compounds for PPARG (see all 43 ) About this table 10/37 DrugBank Compounds for PPARG (see all 37 ) About this table 10/130 Novoseek chemical compound relationships for PPARG gene (see all 130 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
rosiglitazone
96.6
1156
10871190 (6), 18630997 (6), 16425225 (5), 18640979 (5) (see all 99 )
15-deoxy-delta-12,14-prostaglandin j2
96.2
785
12401880 (6), 17643887 (6), 11159824 (5), 16198309 (5) (see all 99 )
troglitazone
95.7
829
10871190 (8), 9709955 (7), 12475986 (6), 16303758 (5) (see all 99 )
gw9662
95.6
391
16696951 (6), 12022867 (6), 18203887 (3), 15533890 (3) (see all 99 )
ciglitazone
95.2
363
12697971 (5), 19288012 (5), 17621259 (4), 14587029 (3) (see all 99 )
pioglitazone
94.7
536
17643887 (5), 12610044 (4), 16210596 (4), 17037742 (4) (see all 99 )
thiazolidinedione
93.9
383
10075686 (6), 14713549 (4), 9832442 (4), 17390024 (3) (see all 99 )
gw 1929
85.8
35
15677767 (2), 11358817 (1), 11597575 (1), 15517883 (1) (see all 21 )
pgj-2
84.8
67
15254749 (7), 14600076 (5), 14971050 (3), 14751245 (2) (see all 28 )
prostaglandin j2
84.3
25
8725145 (1), 11668172 (1), 16842938 (1), 10781090 (1) (see all 20 )
Search CenterWatch for drugs/clinical trials and news about PPARG
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Transcriptsfor PPARG gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for PPARG gene (4 alternative transcripts): NM_005037.5 NM_015869.4 NM_138711.3 NM_138712.3 Unigene Cluster for PPARG:
Peroxisome proliferator-activated receptor gamma Hs.162646 [show with all ESTs ] Unigene Representative Sequence: AB472042 15 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000397010 ENST00000397029 ENST00000309576 (uc003bwr.3 uc003bws.3 uc003bwv.3 )ENST00000397015 ENST00000455517 ENST00000397012 (uc010hdz.1 uc003bwu.3 )ENST00000397026 ENST00000497594 (uc003bwt.1 ) ENST00000438682 ENST00000397000 ENST00000477039 (uc003bww.1 ) ENST00000287820 (uc003bwx.3 ) ENST00000397023 ENST00000396999 (uc010hea.1 ) ENST00000539812 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PPARG (see all 8 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PPARG (see all 8 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 4 ): PPARG (NM_138712 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PPARG Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PPARG
Additional cDNA sequence: AB097931.1 AB107271.1 AB307692.1 AB451337.1 AB451486.1 AB472042.1 AB565476.1 AJ563369.1 AJ563370.1 AJ698135.1 AK223528.1 AK290581.1 BC006811.1 BT007281.1 D83233.1 DQ356894.1 HQ692866.1 U63415.1 U79012.1 X90563.1
11 DOTS entries : DT.112942 DT.100791622
DT.100791623 DT.100791631 DT.75152583 DT.120867762 DT.97811244 DT.100791626 DT.100791629 DT.120867823 DT.95371767 24/116 AceView cDNA sequences (see all 116 ):
BF811102 AI767379 BC006811 CR599329 BG742110 AI200451 BT007281 AI280973 BU618129 AW628342 BQ012686 BQ021210 AB097931 BQ722874 CD101663 BU626490 AI355115 AL543579 U63415 BM790089 BM995901 NM_005037 CR605352 BF514811 GeneLoc Exon Structure 5/9 Alternative Splicing Database (ASD) splice patterns (SP) for PPARG (see all 9 ) About this scheme ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8a · 8b · 8c ^ 9a · 9b · 9c ^ 10a · 10b ^ 11 ^ 12 ^ 13a · 13b · 13c SP1 :           -   -       -                             SP2 :       -   -   -   -   -   -   -                             SP3 :                                               SP4 :                   -                     -         SP5 :       -   -   -   -       -                            
ECgene alternative splicing isoforms for PPARG
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Expression for PPARG gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section PPARG expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: AGTCTTCACC
About this image PPARG expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See PPARG Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PPARG SOURCE GeneReport for Unigene cluster: Hs.162646 UniProtKB/Swiss-Prot: PPARG_HUMAN, P37231 Tissue specificity : Highest expression in adipose tissue. Lower in skeletal muscle, spleen, heart and liver. Alsodetectable in placenta, lung and ovary SABiosciences Expression via Pathway-Focused PCR Arrays including PPARG (see all 21 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PPARGBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat PPARG QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PPARG Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PPARG In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PPARG
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Orthologsfor PPARG gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for PPARG gene from 5/17 species (see all 17 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
PPARG1
peroxisome proliferator-activated receptor gamma
82.25(n) 92.84(a)
 
373928 NM_001001460.1 NP_001001460.1
lizard (Anolis carolinensis)
Reptilia
PPARG6
--
90(a)
1 ↔ 1
2(158830158-158864559)
African clawed frog (Xenopus laevis)
Amphibia
PPARg2
peroxisome proliferator activated receptor gamma
77.61(n)
 
BC060474.1
zebrafish (Danio rerio)
Actinopterygii
pparg1
peroxisome proliferator activated receptor gamma
67.02(n) 69.34(a)
 
557037 NM_131467.1 NP_571542.1
worm (Caenorhabditis elegans)
Secernentea
sex-13
nuclear hormone receptor
27(a)
 
X(10236789-10240655) --
ENSEMBL Gene Tree for PPARG (if available)TreeFam Gene Tree for PPARG (if available)
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Paralogsfor PPARG gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for PPARG gene RORC 2 NR1D2 2 PPARD 2 RORA 2 NR1D1 2 PPARA 2 RORB 2 18/36 SIMAP similar genes for PPARG using alignment to 12 protein entries: PPARG_HUMAN (see all proteins )
(see all similar genes ):NR1C3 ppar gamma2 PPARD NR1C2 NR1C1 NR1F3 NR3C2 RORC HNF4G VDR RXRB PPARA NR6A1 NR1F2 NR1F1 RORB NR2F1 RXRA
PPARG for paralogs About GeneDecksing
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Genomic Variantsfor PPARG gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section UniProtKB/Swiss-Prot: PPARG_HUMAN, P37231 Polymorphism : Genetic variation in PPARG may influence body mass index (BMI) [MIM:606641]. BMI reflects the amount offat, lean mass, and body build Polymorphism : Genetic variations in PPARG influence the carotid intimal medial thickness (CIMT) [MIM:609338]. CIMT is ameasure of atherosclerosis that is independently associated with traditional atherosclerotic cardiovascular disease risk factors and coronary atherosclerotic burden. 35 to 45% of the variability in multivariable-adjusted CIMT is explained by genetic factors
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 3 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for PPARG (12328867 - 12475855 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 3 variations for PPARG 2 Indels : 42164 62033 1 Inversion : 37239 Human Gene Mutation Database (HGMD) : PPARG SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PPARG
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Disorders
/ Diseasesfor PPARG gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
PPARG for disorders About GeneDecksing OMIM gene information: 601487 OMIM disorders : 601665 137800 604367 609338 125853 UniProtKB/Swiss-Prot: PPARG_HUMAN, P37231
Note=Defects in PPARG can lead to type 2 insulin-resistant diabetes and hyptertension. PPARG mutations may be associated with colon cancer Defects in PPARG may be associated with susceptibility to obesity (OBESITY) [MIM:601665]. It is a condition characterized by an increase of body weight beyond the limitation of skeletal and physical requirements, as the result of excessive accumulation of body fat Defects in PPARG are the cause of familial partial lipodystrophy type 3 (FPLD3) [MIM:604367]. Familial partial lipodystrophies (FPLD) are a heterogeneous group of genetic disorders characterized by marked loss of subcutaneous (sc) fat from the extremities. Affected individuals show an increased preponderance of insulin resistance, diabetes mellitus and dyslipidemia Genetic variations in PPARG can be associated with susceptibility to glioma type 1 (GLM1) [MIM:137800]. Gliomas are central nervous system neoplasms derived from glial cells and comprise astrocytomas, glioblastoma multiforme, oligodendrogliomas, and ependymomas. Note=Polymorphic PPARG alleles have been found to be significantly over-represented among a cohort of American patients with sporadic glioblastoma multiforme suggesting a possible contribution to disease susceptibility 20/270 diseases for PPARG (see all 270 ): About MalaCards carotid intimal medial thickness carotid intimal medial thickness 1 obesity insulin resistance, severe, digenic acth-secreting pituitary adenoma atherosclerosis familial partial lipodystrophy type 3 familial partial lipodystrophy salivary gland cancer bowenoid papulosis familial adenomatous polyposis retinol binding protein age related macular degeneration lipodystrophy glucose intolerance carbohydrate metabolic disorder non-small cell lung carcinoma central nervous system disease metabolic syndrome x nelson syndrome 9 diseases from the University of Copenhagen DISEASES database for PPARG :Diabetes mellitus Atherosclerosis Hyperglycemia Lipodystrophy Cancer Hypertension Fatty liver disease Heart disease Hyperinsulinism 10/95 Novoseek disease relationships for PPARG gene (see all 95 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
insulin sensitivity
86.4
343
20182551 (4), 19390629 (3), 15637349 (3), 16920849 (2) (see all 99 )
insulin resistance
86.2
403
16305809 (5), 11533050 (5), 11872365 (5), 16508313 (4) (see all 99 )
obesity
76.9
237
9806316 (4), 12709137 (4), 16716756 (4), 10762291 (3) (see all 99 )
niddm
75.3
147
15558556 (5), 19846173 (3), 16920849 (2), 17884451 (2) (see all 96 )
atherosclerosis
73.2
186
12682906 (3), 11790295 (3), 9636198 (2), 11742860 (2) (see all 99 )
lipodystrophy, familial partial
73.2
26
17766367 (3), 17299075 (2), 17312272 (2), 19748282 (1) (see all 13 )
dyslipidemia
71.3
45
15491498 (3), 15684639 (1), 19636418 (1), 19749155 (1) (see all 33 )
inflammation
71
387
18382616 (5), 18400717 (4), 19828904 (4), 16614990 (3) (see all 99 )
partial lipodystrophy
70.3
21
17356052 (4), 15711581 (3), 12453919 (2), 19749155 (2) (see all 12 )
lipodystrophy
69.1
38
19125203 (3), 19534662 (3), 18954260 (2), 15254581 (2) (see all 21 )
Genatlas disease: PPARG marked obesity with a high body-mass index and a defect in the regulation of adipocyte differentiation associated with type 2 diabetes Genetic Association Database (GAD): PPARG Human Genome Epidemiology (HuGE) Navigator: PPARG (615 documents) Export disorders for PPARG gene to outside databases
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Publicationsfor PPARG gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for PPARG gene, integrated from 9 sources (see all 3894 ): (articles sorted by number of sources associating them with PPARG) Utopia : connect your pdf to the dynamic world of online information
Ala12Ala genotype of the peroxisome proliferator-activated receptor gamma2 protects against atherosclerosis. (PubMed id 15356014) 1 , 2 , 4 Temelkova-Kurktschiev T....Laakso M. (2004) A selective peroxisome proliferator-activated receptor-gamma modulator, telmisartan, binds to the receptor in a different fashion from thiazolidinediones. (PubMed id 19147680) 1 , 7, 9 Tagami T....Naruse M. (2009) [Clinical genetic determinants of carbohydrate metabolism disturbances in patients with hypertension and excessive weight] (PubMed id 15940190) 1 , 4, 9 Kobalava Z.h.D....Moiseev V.S. (2005) PPARgamma gene polymorphism is associated with exercise-mediated changes of insulin resistance in healthy men. (PubMed id 12601634) 1 , 4, 9 Kahara T....Kobayashi K. (2003) [Clinicogenetic aspects of carbohydrate metabolism disorders and efficacy of their correction with moxonidine and metformine in patients with arterial hypertension] (PubMed id 15759454) 1 , 4, 9 Kobalava Z.h.D....Zheleznykh E.A. (2005) Does peroxisome proliferator-activated receptor gamma genotype (Pro12ala) modify the association of physical activity and dietary fat with fasting insulin level? (PubMed id 14681835) 1 , 4, 9 Franks P.W....Wareham N.J. (2004) Alanine for proline substitution in the peroxisome proliferator-activated receptor gamma-2 (PPARG2) gene and the risk of incident myocardial infarction. (PubMed id 12663371) 1 , 4, 9 Ridker P.M....Zee R.Y. (2003) Loss-of-function mutations in PPAR-gamma associated with human colon cancer. (PubMed id 10394368) 1 , 2 , 9 Sarraf P.... Eng C. (1999) No evidence that polymorphisms in CYP2C8, CYP2C9, UGT1A6, PPARdelta and PPARgamma act as modifiers of the protective effect of regular NSAID use on the risk of colorectal carcinoma. (PubMed id 16141797) 1 , 4, 9 McGreavey L.E....Barrett J.H. (2005) Genetic variation in fatty acid-binding protein-4 and peroxisome proliferator-activated receptor gamma interactively influence insulin sensitivity and body composition in males. (PubMed id 15015141) 1 , 4, 9 Damcott C.M....Ferrell R.E. (2004)
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External Searches for PPARG gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing PPARG gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing PPARG gene
(According to HUGE )
About This Section --
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Specialized Databases showing PPARG gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for PPARG Pharmacogenomics, SNPs, Pathways ATLAS Chromosomes in Cancer entry for PPARG Genetics and Cytogenetics in Oncology and Haematology Wikipedia http://en.wikipedia.org/wiki/Peroxisome_proliferator-activated_receptor GeneReviews http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/PPARG SeattleSNPs http://pga.gs.washington.edu/data/pparg/ SHMPD http://shmpd.bii.a-star.edu.sg/gene.php?genestart=A&genename=PPARG
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About This Section Patent Information for PPARG gene: Search GeneIP for patents involving PPARG Licensable Technologies for PPARG gene: GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PPARG gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for PPARG OriGene shRNA RFP for PPARG OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for PPARG OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PPARG OriGene Protein Over-expression Lysate for PPARG Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for PPARG OriGene 3'-UTR Clone for PPARG OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PPARG OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PPARG Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for PPARG OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for PPARG OriGene Custom Protein Services for PPARG OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PPARG QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PPARG QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PPARG QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat PPARG Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PPARG QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PPARG
Antibodies & Assays for PPARG   (PPAR-gamma)
Tocris compounds for PPARG
Recombinant Protein for PPARG
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PPARG
ThermoFisher Antibody for PPARG
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PPARG
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