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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

POU5F1P4 Gene

pseudogene   GIFtS: 24
GCID: GC01P155403

POU class 5 homeobox 1 pseudogene 4

(Previous names: POU domain class 5, transcription factor 1 pseudogene 4...)
  Search for POU5F1P4
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for POU5F1P4    

Aliases
for POU5F1P4 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section
This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
POU Class 5 Homeobox 1 Pseudogene 41 2
POU5FLC11 2
POU Domain Class 5, Transcription Factor 1 Pseudogene 41

External Ids:    HGNC: 333101   Entrez Gene: 6456822   Ensembl: ENSG000002378727   UniProtKB: D5K9S34   UniProtKB: D5K9S44   
UniProtKB: D5K9S54   UniProtKB: D5K9S84   UniProtKB: D5K9T74   UniProtKB: D5K9T84   UniProtKB: D5K9T94   
UniProtKB: D5K9U04   UniProtKB: D5K9U24   UniProtKB: D5K9U44   UniProtKB: D5K9U94   UniProtKB: D5K9V14   
UniProtKB: D5K9W54   UniProtKB: D5K9W64   UniProtKB: E9LR914   UniProtKB: E9LR924   UniProtKB: E9LR934   
UniProtKB: E9LR964   UniProtKB: E9LRA14   UniProtKB: E9LRF24   UniProtKB: E9LRF54   UniProtKB: E9LRF84   
UniProtKB: E9LRJ24   UniProtKB: E9LRM04   UniProtKB: E9LRM14   UniProtKB: E9LRM24   UniProtKB: E9LRM34   
UniProtKB: E9LRP24   UniProtKB: E9LRP34   UniProtKB: E9LRP44   UniProtKB: E9LRP64   UniProtKB: E9LRR84   
UniProtKB: E9LRS94   UniProtKB: E9LRT04   UniProtKB: E9LRT14   
ORGUL members:         
NONCODE:n409776    

Export aliases for POU5F1P4 gene to outside databases

Previous GC identifers: GC00U922238 GC01P153670 GC01P126764


Summaries
for POU5F1P4 gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
  --

Genomic Views
for POU5F1P4 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_004487.19  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for POU5F1P4
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for POU5F1P4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat POU5F1P4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1q22   Ensembl cytogenetic band:  1q22   HGNC cytogenetic band: 1q22

POU5F1P4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
POU5F1P4 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01P155403:  view genomic region     (about GC identifiers)

Start:
 155,402,969 bp from pter      End:
 155,404,053 bp from pter
Size:
 1,085 bases      Orientation:
 plus strand

Proteins
for POU5F1P4 gene

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section
UniProtKB/TrEMBL: D5K9S3 (See protein sequence)
Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31173 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9S4 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg1  
Size: 359 amino acids; 38572 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9S5 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31161 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9S8 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31159 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9T7 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31189 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9T8 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31129 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9T9 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31160 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9U0 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31159 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9U2 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31142 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9U4 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31155 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9U9 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31189 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9V1 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31258 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9W5 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31071 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: D5K9W6 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31104 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LR91 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31156 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LR92 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31143 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LR93 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31160 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LR96 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31143 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRA1 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31284 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRF2 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31160 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRF5 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31159 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRF8 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31198 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRJ2 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31189 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRM0 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31115 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRM1 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31187 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRM2 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31087 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRM3 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31169 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRP2 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31010 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRP3 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31212 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRP4 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31019 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRP6 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31212 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRR8 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31127 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRS9 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31217 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRT0 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31187 Da
Subcellular location: Nucleus (By similarity)

UniProtKB/TrEMBL: E9LRT1 (See protein sequence)

Recommended Name: POU domain transcription factor OCT4-pg4  
Size: 286 amino acids; 31187 Da
Subcellular location: Nucleus (By similarity)

Protein Domains /
Families
for POU5F1P4 gene

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section
POU5F1P4 for domains           About GeneDecksing

7 InterPro domains/families (see first 5):
 IPR010982 Lambda_DNA-bd_dom
 IPR013847 POU
 IPR000327 POU_specific
 IPR017970 Homeobox_CS
 IPR001356 Homeodomain
 IPR009057 Homeodomain-like
 IPR015585 POU_dom_5

Graphical View of Domain Structure for InterPro Entry D5K9S3
Graphical View of Domain Structure for InterPro Entry D5K9S4
Graphical View of Domain Structure for InterPro Entry D5K9S5
Graphical View of Domain Structure for InterPro Entry D5K9S8
Graphical View of Domain Structure for InterPro Entry D5K9T7
Graphical View of Domain Structure for InterPro Entry D5K9T8
Graphical View of Domain Structure for InterPro Entry D5K9T9
Graphical View of Domain Structure for InterPro Entry D5K9U0
Graphical View of Domain Structure for InterPro Entry D5K9U2
Graphical View of Domain Structure for InterPro Entry D5K9U4
Graphical View of Domain Structure for InterPro Entry D5K9U9
Graphical View of Domain Structure for InterPro Entry D5K9V1
Graphical View of Domain Structure for InterPro Entry D5K9W5
Graphical View of Domain Structure for InterPro Entry D5K9W6
Graphical View of Domain Structure for InterPro Entry E9LR91
Graphical View of Domain Structure for InterPro Entry E9LR92
Graphical View of Domain Structure for InterPro Entry E9LR93
Graphical View of Domain Structure for InterPro Entry E9LR96
Graphical View of Domain Structure for InterPro Entry E9LRA1
Graphical View of Domain Structure for InterPro Entry E9LRF2
Graphical View of Domain Structure for InterPro Entry E9LRF5
Graphical View of Domain Structure for InterPro Entry E9LRF8
Graphical View of Domain Structure for InterPro Entry E9LRJ2
Graphical View of Domain Structure for InterPro Entry E9LRM0
Graphical View of Domain Structure for InterPro Entry E9LRM1
Graphical View of Domain Structure for InterPro Entry E9LRM2
Graphical View of Domain Structure for InterPro Entry E9LRM3
Graphical View of Domain Structure for InterPro Entry E9LRP2
Graphical View of Domain Structure for InterPro Entry E9LRP3
Graphical View of Domain Structure for InterPro Entry E9LRP4
Graphical View of Domain Structure for InterPro Entry E9LRP6
Graphical View of Domain Structure for InterPro Entry E9LRR8
Graphical View of Domain Structure for InterPro Entry E9LRS9
Graphical View of Domain Structure for InterPro Entry E9LRT0
Graphical View of Domain Structure for InterPro Entry E9LRT1

ProtoNet protein and cluster: D5K9S3

UniProtKB/TrEMBL: D5K9S3
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9S4
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9S5
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9S8
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9T7
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9T8
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9T9
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9U0
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9U2
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9U4
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9U9
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9V1
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9W5
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: D5K9W6
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LR91
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LR92
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LR93
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LR96
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRA1
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRF2
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRF5
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRF8
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRJ2
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRM0
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRM1
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRM2
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRM3
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRP2
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRP3
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRP4
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRP6
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRR8
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRS9
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRT0
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain

UniProtKB/TrEMBL: E9LRT1
Similarity: Contains 1 POU-specific domain
Similarity: Contains 1 homeobox DNA-binding domain


Function
for POU5F1P4 gene

(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section
miRNA
Products:    		Browse 3'-UTR reporter clones for miRNA target validation
Browse MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat POU5F1P4
Search QIAGEN for miScript miRNA Assays for microRNAs that regulate POU5F1P4
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:    		Browse for Gene Knock-down Tools from EMD Millipore
Browse OriGene 29mer shRNA kits
Browse OriGene siRNA
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat POU5F1P4

Gene Editing
Products:		DNA2.0 Custom Protein Engineering Service for POU5F1P4

Clone
Products:     		Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
Browse OriGene untagged/tagged cDNA clones in CMV expression vector
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript Custom all cDNA clones Services for POU5F1P4
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for POU5F1P4
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat POU5F1P4 

Cell Line
Products:     		GenScript Custom overexpressing Cell Line Services for POU5F1P4
Search LifeMap BioReagents cell lines for POU5F1P4

In Situ Assay
Products:   
 		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for POU5F1P4


Pathways & Interactions
for POU5F1P4 gene

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section



Interactions:

    Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for POU5F1P4

Drugs & Compounds
for POU5F1P4 gene

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section
Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for POU5F1P4
Search CenterWatch for drugs/clinical trials and news about POU5F1P4 

Transcripts
for POU5F1P4 gene

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

Unigene Cluster for POU5F1P4:

POU class 5 homeobox 1 pseudogene 4
Hs.632482
Unigene Representative Sequence: DQ851566
2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000413175(uc010pgd.2) ENST00000545402

miRNA
Products:     		Browse 3'-UTR reporter clones for miRNA target validation
Browse OriGene MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat POU5F1P4
Search QIAGEN for miScript miRNA Assays for microRNAs that regulate POU5F1P4
Browse SwitchGear 3'UTR luciferase reporter plasmids
Inhib. RNA
Products:     		Browse for Gene Knock-down Tools from EMD Millipore
Browse OriGene 29mer shRNA kits
Browse OriGene siRNA
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat POU5F1P4
Clone
Products:     		Browse OriGene untagged/tagged cDNA clones in CMV expression vector
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript Custom all cDNA clones Services for POU5F1P4
DNA2.0 Custom Codon Optimized Gene Synthesis Service for POU5F1P4
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat POU5F1P4 
Primer
Products:    		Browse OriGene genome-wide validated SYBR primer pairs
Browse OriGene validated miRNA SYBR primer pairs
Search SABiosciences RT2 qPCR Primer Assays in human, mouse, rat POU5F1P4
  Search QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat POU5F1P4
  Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat POU5F1P4

Additional cDNA sequence: 

AF268613.1 DQ851566.1 FM178001.1 FM178002.1 FM178003.1 FM178004.1 FM178005.1 FM178006.1 
FM178007.1 FM178008.1 FM178009.1 FM178010.1 FM178011.1 FM178012.1 NR_034180.1 Z21963.1 

1 DOTS entry:

DT.112740 

GeneLoc Exon Structure


Expression
for POU5F1P4 gene

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

POU5F1P4 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: CCCCCCGCTG

Microarray
RNAseq (Illumina Body Map)
(100×FPKM)½
SAGE (Serial Analysis of Gene Expression)
About this image

POU5F1P4 expression in embryonic tissues and stem cells
Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
Stem Cell Differentiation: 2 LifeMap Cells 
NameCategory
Mesenchymal Progenitor Cells - Passage 2 (Differentiation of ...)
Matrigel embedded cells (Derivation of cardio...)
Expression: Positive    Negative     Selective marker
Experimental details: Curated     Microarrays     In-situ hybridization

Genevestigator expression for POU5F1P4

SOURCE GeneReport for Unigene cluster: Hs.632482
    SABiosciences Custom PCR Arrays for POU5F1P4
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In Situ
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Orthologs
for POU5F1P4 gene

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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ENSEMBL Gene Tree for POU5F1P4 (if available)
TreeFam Gene Tree for POU5F1P4 (if available) 

Paralogs
for POU5F1P4 gene

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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  --

Genomic Variants
for POU5F1P4 gene

(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
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SABiosciences Cancer Mutation PCR Assays
Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing POU5F1P4
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Disorders / Diseases
for POU5F1P4 gene

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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Publications
for POU5F1P4 gene

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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PubMed articles for POU5F1P4 gene integrated from 9 sources:
(articles sorted by number of sources associating them with POU5F1P4)		    Utopia: connect your pdf to the dynamic
world of online information

  1. Stem cell regulatory function mediated by expression of a novel mouse Oct4 pseudogene. (PubMed id 17280643)1 Lin H....Lee T. (2007)
  2. Oct4 pseudogenes are transcribed in cancers. (PubMed id 16229821)1 Suo G.... Dai J. (2005)
  3. A human POU domain gene, mPOU, is expressed in developing brain and specific adult tissues. (PubMed id 7908264)1 Wey E.... Schaefer B.W. (1994)

External Searches for POU5F1P4 gene

(in PubMed, OMIM, and NCBI Bookshelf)
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 ANDOR
Aliases
Free Text  
  Query String
PubMed
OMIM
NCBI Bookshelf
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Genome Databases showing POU5F1P4 gene

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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Entrez Gene: 645682 HGNC: 33310 Ensembl:ENSG00000237872 euGenes: HUgn645682 ECgene: POU5F1P4
H-InvDB: POU5F1P4

Other Databases showing POU5F1P4 gene

(According to HUGE)
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Specialized Databases showing POU5F1P4 gene

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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   --

Intellectual Property
for POU5F1P4 gene

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section
Patent Information for POU5F1P4 gene:
Search GeneIP for patents involving POU5F1P4

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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