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Aliases for POU5F1P3 Gene

Aliases for POU5F1P3 Gene

  • POU Class 5 Homeobox 1 Pseudogene 3 2 3 5
  • POU Domain Class 5, Transcription Factor 1 Pseudogene 3 2 3
  • POU Domain, Class 5, Transcription Factor 1-Like 2
  • POU Domain Transcription Factor OCT4-Pg3 3
  • POU5FLC12 3
  • OCT4-Pg3 3
  • POU5F1L 3
  • OTF3L 3

External Ids for POU5F1P3 Gene

Previous HGNC Symbols for POU5F1P3 Gene

  • OTF3L
  • POU5F1L

Previous GeneCards Identifiers for POU5F1P3 Gene

  • GC12U900755
  • GC12M008179
  • GC12M008286

Summaries for POU5F1P3 Gene

GeneCards Summary for POU5F1P3 Gene

POU5F1P3 (POU Class 5 Homeobox 1 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for POU5F1P3 Gene

Genomics for POU5F1P3 Gene

Genomic Location for POU5F1P3 Gene

Chromosome:
12
Start:
8,133,769 bp from pter
End:
8,134,852 bp from pter
Size:
1,084 bases
Orientation:
Minus strand

Genomic View for POU5F1P3 Gene

Genes around POU5F1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
POU5F1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for POU5F1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for POU5F1P3 Gene

No data available for Regulatory Elements for POU5F1P3 Gene

Proteins for POU5F1P3 Gene

  • Protein details for POU5F1P3 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D5K9S6
    Recommended name:
    POU domain transcription factor OCT4-pg3
    Protein Accession:
    D5K9S6

    Protein attributes for POU5F1P3 Gene

    Size:
    186 amino acids
    Molecular mass:
    19192 Da
    Quaternary structure:
    No Data Available

neXtProt entry for POU5F1P3 Gene

Proteomics data for POU5F1P3 Gene at MOPED

Post-translational modifications for POU5F1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for POU5F1P3 Gene

Domains & Families for POU5F1P3 Gene

Gene Families for POU5F1P3 Gene

Protein Domains for POU5F1P3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with POU5F1P3: view

No data available for UniProtKB/Swiss-Prot for POU5F1P3 Gene

Function for POU5F1P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for POU5F1P3 Gene

Localization for POU5F1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for POU5F1P3 Gene

Pathways & Interactions for POU5F1P3 Gene

SuperPathways for POU5F1P3 Gene

No Data Available

Interacting Proteins for POU5F1P3 Gene

Gene Ontology (GO) - Biological Process for POU5F1P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for POU5F1P3 Gene

Drugs & Compounds for POU5F1P3 Gene

No Compound Related Data Available

Transcripts for POU5F1P3 Gene

mRNA/cDNA for POU5F1P3 Gene

(22) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for POU5F1P3 Gene

POU class 5 homeobox 1 pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for POU5F1P3 Gene

No ASD Table

Relevant External Links for POU5F1P3 Gene

GeneLoc Exon Structure for
POU5F1P3
ECgene alternative splicing isoforms for
POU5F1P3

Expression for POU5F1P3 Gene

mRNA expression in normal human tissues for POU5F1P3 Gene

mRNA differential expression in normal tissues according to GTEx for POU5F1P3 Gene

This gene is overexpressed in Whole Blood (x6.9).

SOURCE GeneReport for Unigene cluster for POU5F1P3 Gene Hs.646545

genes like me logo Genes that share expression patterns with POU5F1P3: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for POU5F1P3 Gene

Orthologs for POU5F1P3 Gene

Evolution for POU5F1P3 Gene

ENSEMBL:
Gene Tree for POU5F1P3 (if available)
TreeFam:
Gene Tree for POU5F1P3 (if available)

No data available for Orthologs for POU5F1P3 Gene

Paralogs for POU5F1P3 Gene

genes like me logo Genes that share paralogs with POU5F1P3: view

No data available for Paralogs for POU5F1P3 Gene

Variants for POU5F1P3 Gene

Structural Variations from Database of Genomic Variants (DGV) for POU5F1P3 Gene

Variant ID Type Subtype PubMed ID
dgv455e1 CNV Complex 17122850
nsv428270 CNV Gain 18775914
dgv459e1 CNV Complex 17122850
dgv460e1 CNV Complex 17122850
dgv461e1 CNV Complex 17122850

Relevant External Links for POU5F1P3 Gene

HapMap Linkage Disequilibrium report
POU5F1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for POU5F1P3 Gene

Disorders for POU5F1P3 Gene

Relevant External Links for POU5F1P3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
POU5F1P3

No disorders were found for POU5F1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for POU5F1P3 Gene

Publications for POU5F1P3 Gene

  1. In situ hybridization localizes the human OTF3 to chromosome 6p21.3-->p22 and OTF3L to 12p13. (PMID: 8500351) Guillaudeux T. … Pontarotti P. (Cytogenet. Cell Genet. 1993) 2 3 67
  2. Expression and differentiation between OCT4A and its Pseudogenes in human ESCs and differentiated adult somatic cells. (PMID: 24586860) Jez M. … Dominko T. (PLoS ONE 2014) 3
  3. Differential expression of Oct4 variants and pseudogenes in normal urothelium and urothelial cancer. (PMID: 23933063) Wezel F. … Southgate J. (Am. J. Pathol. 2013) 3
  4. Oct-3/4: not just a gatekeeper of pluripotency for embryonic stem cell, a cell fate instructor through a gene dosage effect. (PMID: 17245123) Stefanovic S. … PucAcat M. (Cell Cycle 2007) 3
  5. Oct4 pseudogenes are transcribed in cancers. (PMID: 16229821) Suo G. … Dai J. (Biochem. Biophys. Res. Commun. 2005) 3

Products for POU5F1P3 Gene

Sources for POU5F1P3 Gene

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