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Aliases for POU5F1P3 Gene

Aliases for POU5F1P3 Gene

  • POU Class 5 Homeobox 1 Pseudogene 3 2 3
  • POU Domain Class 5, Transcription Factor 1 Pseudogene 3 2 3
  • POU Domain, Class 5, Transcription Factor 1-Like 2
  • POU Domain Transcription Factor OCT4-Pg3 3
  • POU5FLC12 3
  • OCT4-Pg3 3
  • POU5F1L 3
  • OTF3L 3

External Ids for POU5F1P3 Gene

Previous HGNC Symbols for POU5F1P3 Gene

  • OTF3L
  • POU5F1L

Previous GeneCards Identifiers for POU5F1P3 Gene

  • GC12U900755
  • GC12M008179
  • GC12M008286

Summaries for POU5F1P3 Gene

GeneCards Summary for POU5F1P3 Gene

POU5F1P3 (POU Class 5 Homeobox 1 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for POU5F1P3 Gene

Genomics for POU5F1P3 Gene

Genomic Location for POU5F1P3 Gene

Start:
8,133,769 bp from pter
End:
8,134,852 bp from pter
Size:
1,084 bases
Orientation:
Minus strand

Genomic View for POU5F1P3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for POU5F1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for POU5F1P3 Gene

No data available for Regulatory Elements for POU5F1P3 Gene

Proteins for POU5F1P3 Gene

  • Protein details for POU5F1P3 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D5K9S6
    Recommended name:
    POU domain transcription factor OCT4-pg3
    Protein Accession:
    D5K9S6
    Secondary Accessions:

    Protein attributes for POU5F1P3 Gene

    Size:
    186 amino acids
    Molecular mass:
    19192 Da
    Quaternary structure:
    No Data Available

neXtProt entry for POU5F1P3 Gene

Proteomics data for POU5F1P3 Gene at MOPED

Post-translational modifications for POU5F1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for POU5F1P3 Gene

Domains for POU5F1P3 Gene

Gene Families for POU5F1P3 Gene

HGNC:
  • POU :Homeoboxes / POU class

Protein Domains for POU5F1P3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with POU5F1P3: view

No data available for UniProtKB/Swiss-Prot for POU5F1P3 Gene

Function for POU5F1P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for POU5F1P3 Gene

Localization for POU5F1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for POU5F1P3 Gene

Pathways for POU5F1P3 Gene

SuperPathways for POU5F1P3 Gene

No Data Available

Interacting Proteins for POU5F1P3 Gene

Gene Ontology (GO) - Biological Process for POU5F1P3 Gene

None

No data available for Pathways by source for POU5F1P3 Gene

Transcripts for POU5F1P3 Gene

mRNA/cDNA for POU5F1P3 Gene

(22) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for POU5F1P3 Gene

POU class 5 homeobox 1 pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for POU5F1P3 Gene

No ASD Table

Relevant External Links for POU5F1P3 Gene

GeneLoc Exon Structure for
POU5F1P3
ECgene alternative splicing isoforms for
POU5F1P3

Expression for POU5F1P3 Gene

mRNA expression in normal human tissues for POU5F1P3 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for POU5F1P3 Gene

This gene is overexpressed in Whole Blood (6.9).

SOURCE GeneReport for Unigene cluster for POU5F1P3 Gene Hs.646545

genes like me logo Genes that share expressions with POU5F1P3: view

In Situ Assay Products

No data available for Protein expression and mRNA Expression by UniProt/SwissProt for POU5F1P3 Gene

Orthologs for POU5F1P3 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for POU5F1P3 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm5712 16
Species with no ortholog for POU5F1P3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for POU5F1P3 Gene

ENSEMBL:
Gene Tree for POU5F1P3 (if available)
TreeFam:
Gene Tree for POU5F1P3 (if available)

Paralogs for POU5F1P3 Gene

genes like me logo Genes that share paralogs with POU5F1P3: view

No data available for Paralogs for POU5F1P3 Gene

Variants for POU5F1P3 Gene

Structural Variations from Database of Genomic Variants (DGV) for POU5F1P3 Gene

Variant ID Type Subtype PubMed ID
dgv455e1 CNV Complex 17122850
nsv428270 CNV Gain 18775914
dgv459e1 CNV Complex 17122850
dgv460e1 CNV Complex 17122850
dgv461e1 CNV Complex 17122850

Relevant External Links for POU5F1P3 Gene

HapMap Linkage Disequilibrium report
POU5F1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for POU5F1P3 Gene

Disorders for POU5F1P3 Gene

No disorders were found for POU5F1P3 Gene.

No data available for UniProtKB/Swiss-Prot for POU5F1P3 Gene

Publications for POU5F1P3 Gene

  1. In situ hybridization localizes the human OTF3 to chromosome 6p21.3-->p22 and OTF3L to 12p13. (PMID: 8500351) Guillaudeux T. … Pontarotti P. (Cytogenet. Cell Genet. 1993) 2 3
  2. Oct4 pseudogenes are transcribed in cancers. (PMID: 16229821) Suo G. … Dai J. (Biochem. Biophys. Res. Commun. 2005) 3
  3. Oct-3/4: not just a gatekeeper of pluripotency for embryonic stem cell, a cell fate instructor through a gene dosage effect. (PMID: 17245123) Stefanovic S. … PucAcat M. (Cell Cycle 2007) 3
  4. Differential expression of Oct4 variants and pseudogenes in normal urothelium and urothelial cancer. (PMID: 23933063) Wezel F. … Southgate J. (Am. J. Pathol. 2013) 3
  5. Expression and differentiation between OCT4A and its Pseudogenes in human ESCs and differentiated adult somatic cells. (PMID: 24586860) Jez M. … Dominko T. (PLoS ONE 2014) 3

Products for POU5F1P3 Gene

Sources for POU5F1P3 Gene

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