Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

POU3F3 Gene

protein-coding   GIFtS: 52
GCID: GC02P105471

POU class 3 homeobox 3

(Previous names: POU domain class 3, transcription factor 3 )
 Explore 2 diseases affiliated with
POU3F3 via our new
 Human Malady Compendium 
Biological research products
for POU3F3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
POU Class 3 Homeobox 31 2     Brain-13
BRN11 2 3     Brn-13
OTF81 2 3     Oct-83
Brain-Specific Homeobox/POU Domain Protein 12 3     POU Domain, Class 3, Transcription Factor 32
Octamer-Binding Protein 82 3     Brain-13
Octamer-Binding Transcription Factor 82 3     Brn-13
OTF-82 3     Oct-83
POU Domain Class 3, Transcription Factor 31     

External Ids:    HGNC: 92161   Entrez Gene: 54552   Ensembl: ENSG000001989147   OMIM: 6024805   UniProtKB: P202643   

Export aliases for POU3F3 gene to outside databases

Previous GC identifers: GC02P103336 GC02P103924 GC02P105076 GC02P105093 GC02P104930 GC02P099242


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for POU3F3:
POU3F3 is a member of the class III POU family of transcription factors (see POU3F1; MIM 602479) that are expressed in
the central nervous system. The POU domain in these proteins is required for high affinity binding to octamer DNA
sequences (summarized by Sumiyama et al., 1996 (PubMed 8703082)).(supplied by OMIM, Jul 2010)

UniProtKB/Swiss-Prot: PO3F3_HUMAN, P20264
Function: Transcription factor that acts synergistically with SOX11 and SOX4. Plays a role in neuronal development. Is
implicated in an enhancer activity at the embryonic met-mesencephalic junction; the enhancer element contains the
octamer motif (5'-ATTTGCAT-3') (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_022171.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the POU3F3 gene promoter:
         GR   FOXF2   Pax-5   Bach2   CUTL1   N-Myc   PPAR-gamma1   Chx10   PPAR-gamma2   GR-alpha   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for POU3F3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat POU3F3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q12.1   Ensembl cytogenetic band:  2q12.1   HGNC cytogenetic band: 2q12.1

POU3F3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
POU3F3 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P105471:  view genomic region     (about GC identifiers)

Start:
105,471,969 bp from pter      End:
105,476,929 bp from pter
Size:
4,961 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PO3F3_HUMAN, P20264 (See protein sequence)
Recommended Name: POU domain, class 3, transcription factor 3  
Size: 500 amino acids; 50327 Da
Subcellular location: Nucleus
Secondary accessions: P78379 Q4ZG25

Explore the universe of human proteins at neXtProt for POU3F3: NX_P20264

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P20264

  • POU3F3 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_006227.1  
    ENSEMBL proteins: 
     ENSP00000355001  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for POU3F3 
    GenScript Custom Purified and Recombinant Proteins Services for POU3F3
    Novus Biologicals POU3F3 Protein
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus ISS--


    POU3F3 for ontologies           About GeneDecksing



    POU3F3 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for POU3F3 
    GenScript Custom Superior Antibodies Services for POU3F3
    Novus Biologicals POU3F3 Antibodies
    Search for Antibodies for POU3F3 at Abcam  
    Browse Antibodies at Uscn
    ThermoFisher Antibodies for POU3F3

    Assay Products for POU3F3: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for POU3F3
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    POU3F3 for domains           About GeneDecksing

    5/7 InterPro domains/families (see all 7):
     IPR010982 Lambda_DNA-bd_dom
     IPR016362 Transcription_factor_POU
     IPR013847 POU
     IPR000327 POU_specific
     IPR017970 Homeobox_CS

    Graphical View of Domain Structure for InterPro Entry P20264

    ProtoNet protein and cluster: P20264

    2 Blocks protein families:
    IPB000327 POU domain
    IPB013847 POU


    UniProtKB/Swiss-Prot: PO3F3_HUMAN, P20264
    Similarity: Belongs to the POU transcription factor family. Class-3 subfamily
    Similarity: Contains 1 homeobox DNA-binding domain
    Similarity: Contains 1 POU-specific domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: PO3F3_HUMAN, P20264
    Function: Transcription factor that acts synergistically with SOX11 and SOX4. Plays a role in neuronal development. Is
    implicated in an enhancer activity at the embryonic met-mesencephalic junction; the enhancer element contains the
    octamer motif (5'-ATTTGCAT-3') (By similarity)

         Genatlas biochemistry entry for POU3F3:
    POU domain,class 3,transcription factor 3,expressed in brain

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat POU3F3
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate POU3F3
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for POU3F3 (see all 7)
    OriGene shRNA RFP: POU3F3
    OriGene siRNA: POU3F3
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat POU3F3

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for POU3F3

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for POU3F3 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for POU3F3
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: POU3F3 (NM_006236)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for POU3F3
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat POU3F3 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for POU3F3
    Search LifeMap BioReagents cell lines for POU3F3

    In Situ Assay
    Products:
       

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for POU3F3

    Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding ----
    GO:0003700sequence-specific DNA binding transcription factor activity IEA--
    GO:0003705RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity ----
    GO:0005515protein binding ----
    GO:0016563transcription activator activity ----


    POU3F3 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for POU3F3:
     Decreased Wnt reporter activit  Decreased number of cells in m 

    Animal Models:
         Mouse knock-outs for POU3F3: Pou3f3tm1Rmc Pou3f3tm1Tno
         8 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Pou3f3):
     cellular  craniofacial  hearing/vestibular/ear  homeostasis/metabolism  mortality/aging 
     nervous system  renal/urinary system  skeleton 

    POU3F3 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Transcription factors in neurogenesis
    Transcription factors in neurogenesis1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for POU3F3
        Transcription factors in neurogenesis




    POU3F3 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for POU3F3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 10)

    5/13 Interacting proteins for POU3F3 (P202642, 3 ENSP000003550014) via UniProtKB, MINT, STRING, and/or I2D (see all 13)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PPP1R15AO758072, 3, ENSP000002004534MINT-63546 I2D: score=4 STRING: ENSP00000200453
    CAV1Q031353, ENSP000003391914I2D: score=1 STRING: ENSP00000339191
    SOX11P357163, ENSP000003225684I2D: score=1 STRING: ENSP00000322568
    SOX10P566933, ENSP000003541304I2D: score=1 STRING: ENSP00000354130
    POU3F4P493353, ENSP000003622964I2D: score=3 STRING: ENSP00000362296
    About this table

    Gene Ontology (GO): 5/18 biological process terms (GO ID links to tree view) (see all 18):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000122negative regulation of transcription from RNA polymerase II promoter ----
    GO:0001822kidney development ----
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent ----
    GO:0007417central nervous system development TAS8703082


    POU3F3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for POU3F3
    Search CenterWatch for drugs/clinical trials and news about POU3F3 / PO3F3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for POU3F3 gene: 
    NM_006236.1  

    Unigene Cluster for POU3F3:

    POU class 3 homeobox 3
    Hs.673855  [show with all ESTs]
    Unigene Representative Sequence: NM_006236
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000361360(uc010ywg.2)

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat POU3F3
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate POU3F3
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for POU3F3 (see all 7)
    OriGene shRNA RFP: POU3F3
    OriGene siRNA: POU3F3
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat POU3F3
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for POU3F3 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for POU3F3
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: POU3F3 (NM_006236)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for POU3F3
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat POU3F3 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for POU3F3
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat POU3F3
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat POU3F3
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat POU3F3

    1 DOTS entry:

    DT.95081172 

    10 AceView cDNA sequences:

    NM_006236 F11569 BI464570 BF341357 BF355891 BF511732 AI796236 BX418484 
    BG911951 AF067777 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    POU3F3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ACGCCGCCCG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    POU3F3 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    10/22 LifeMap In Vivo Development Anatomical Compartments/Cells (see all 22
    Tissue Anatomical Compartment CellCategory (developmental path)
    KidneyLoop of HenleLoop of Henle CellsKidney
    KidneyRenal VesicleDistal Renal Vesicle CellsKidney
    KidneyS-shaped Body Distal SegmentS-shaped Body Distal CellsKidney
    KidneyS-shaped Body Medial SegmentS-shaped Body Medial CellsKidney
    KidneyDistal TubuleDistal Tubule CellsKidney
    KidneyProximal TubuleProximal Tubule CellsKidney
    KidneyRenal Collecting Duct SystemCollecting Duct CellsKidney
    BoneMaxillary ProcessBone
    BrainHypothalamusBrain
    BrainMedulla OblongataBrain
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See POU3F3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for POU3F3

    SOURCE GeneReport for Unigene cluster: Hs.673855

    UniProtKB/Swiss-Prot: PO3F3_HUMAN, P20264
    Tissue specificity: Brain

        SABiosciences Expression via Pathway-Focused PCR Arrays including POU3F3: 
              Neurogenesis in human mouse rat
              Molecular Toxicology PathwayFinder 384HT in human mouse rat
              Homeobox (HOX) Genes in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for POU3F3
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat POU3F3
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat POU3F3
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat POU3F3
    In Situ
    Assay Products:
     

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for POU3F3

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for POU3F3 gene from 17 species (see representative species )    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Pou3f31 , 5 POU domain, class 3, transcription factor 31, 5 91.68(n)1
    99.6(a)1
      1 (21.21 cM)5
    189931  NM_008900.21  NP_032926.21 
     426957685 
    rat
    (Rattus norvegicus)
    Mammalia Pou3f31 POU class 3 homeobox 3 91.68(n)
    99.4(a)
      192109  NM_138837.1  NP_620192.1 
    oppossum
    (Monodelphis domestica)
    Mammalia POU3F36
    Uncharacterized protein
    95(a)
    1 ↔ 1
    7(69156684-69177355)
    chicken
    (Gallus gallus)
    Aves LOC1008574221 POU domain, class 3, transcription factor 4-like 89.54(n)
    91.67(a)
      100857422  XM_003641077.1  XP_003641125.1 
    lizard
    (Anolis carolinensis)
    Reptilia O73627_ANOCA6
    Brain-1 gene
    74(a)
    1 ↔ 1
    GL343243.1(157682-159046)
    zebrafish
    (Danio rerio)
    Actinopterygii Y07906.12   -- 76.06(n)   30386  Y07906.1 
    sea urchin
    (Strongylocentrotus purpuratus)
    Echinoidea --
    --
    36(a)
    possible ortholog
    scaffold_554(60127-61530)
    fruit fly
    (Drosophila melanogaster)
    Insecta vvl1 , 3 peripheral nervous system development DNA
    binding3
    ventral veins lacking1
    81(a)
    (best of 3)3
    64.29(n)1
    64.29(a)1
      3 65C53
    387521  NM_001169884.11  NP_001163355.11 
    mosquito
    (Anopheles gambiae)
    Insecta AgaP_AGAP0058781 AGAP005878-PB 65.7(n)
    63.59(a)
      1276544  XM_315904.4  XP_315904.4 
    honey bee
    (Apis mellifera)
    Insecta --
    --
    40(a)
    1 → many
    Group10.10(99920-101299)
    worm
    (Caenorhabditis elegans)
    Secernentea ceh-63 Homeobox domain, Pou domain - N-terminal to
    homeobox more
    69(a)   I(8506480-8510320)   --
    schistosome parasite
    (Schistosoma mansoni)
    Trematoda Smp_1495706
    Pou3/brn-1, putative
    16(a)
    possible ortholog
    Smp_scaff000130(379355-389097)
    common water flea
    (Daphnia pulex)
    Crustacea --
    --
    88(a)
    1 → many
    scaffold_86(434292-434795)
    Trichoplax
    (Trichoplax adhaerens)
    Tricoplacia --
    --
    85(a)
    possible ortholog
    scaffold_5(3998310-3998762)
    sea anemone
    (Nematostella vectensis)
    Anthozoa --
    --
    (see all 3)
    --
    72(a)
    62(a)
    (see all 3)
    1 ↔ many
    possible ortholog
    (see all 3)
    scaffold_262(71949-72503) NEMVEDRAFT_v1g129257
    scaffold_450(6340-6777) NEMVEDRAFT_v1g3734
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes YOX1(YML027W)4 Homeodomain-containing transcriptional repressor, binds more   --   13(221406-222563) 854981  NP_013685.1 
    rice
    (Oryza sativa)
    Liliopsida AK060806.12   -- 73.23(n)    AK060806.1 
            Species with no ortholog for POU3F3

    ENSEMBL Gene Tree for POU3F3 (if available)
    TreeFam Gene Tree for POU3F3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for POU3F3 gene
    POU5F22  POU6F22  POU4F22  POU2F32  POU3F42  POU3F12  POU1F12  POU4F32  
    POU3F22  POU2F22  POU5F1B2  POU2F12  POU4F12  POU5F12  POU6F12  
    11 SIMAP similar genes for POU3F3 using alignment to 1 protein entry:     PO3F3_HUMAN:
    POU6F1    POU1F1    POU3F2    POU5F1P4    POU3F1    POU3F4
    POU2F1    POU4F3    POU2F3    POU4F1    POU4F2

    POU3F3 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/29 NCBI SNPs in POU3F3 are shown (see all 29    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs729476611,2
    C,F,--105470075(+) TCTCTG/AGCGGG 1 -- us2k11Minor allele frequency- A:0.03WA 118
    rs1485060221,2
    C,--105470243(+) GCGAAA/CGCCCA 1 -- us2k10--------
    rs1819834471,2
    --105470367(+) AGGACG/TACAGA 1 -- us2k10--------
    rs1145105361,2
    --105470622(+) GTCAGA/TTCGGA 1 -- us2k11Minor allele frequency- T:0.01NA 120
    rs1995151441,2
    C--105470676(+) ACTTTC/TCCTCT 1 -- us2k10--------
    rs1418196281,2
    --105470761(+) CCAGCG/TCCCGC 1 -- us2k10--------
    rs1460611211,2
    --105471017(+) TTCTGC/TCCAAA 1 -- us2k10--------
    rs1863104321,2
    --105471184(+) CAGAGC/GGGGAG 1 -- us2k10--------
    rs1907937691,2
    --105471243(+) CACGCC/TTTCAA 1 -- us2k10--------
    rs1147163981,2
    --105471270(+) CTACTC/TTAAGG 1 -- us2k11Minor allele frequency- T:0.01WA 118

    HapMap Linkage Disequilibrium report for POU3F3 (105471969 - 105476929 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for POU3F3: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing POU3F3
    DNA2.0 Custom Variant and Variant Library Synthesis for POU3F3

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    POU3F3 for disorders           About GeneDecksing

    OMIM gene information: 602480    OMIM disorders: --

    2 diseases for POU3F3:    About MalaCards
    cerebritis    neuronitis

    Human Genome Epidemiology (HuGE) Navigator: POU3F3 (1 document)

    Export disorders for POU3F3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for POU3F3 gene, integrated from 9 sources (see all 14):
    (articles sorted by number of sources associating them with POU3F3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Class III POU genes: generation of homopolymeric amino acid repeats under GC pressure in mammals. (PubMed id 8703082)1, 2 Sumiyama K.... Ueda S. (1996)
    2. Expression of a large family of POU-domain regulatory genes in mammalian brain development. (PubMed id 2739723)1, 2 He X....Rosenfeld M.G. (1989)
    3. Cooperative function of POU proteins and SOX proteins in glial cells. (PubMed id 9632656)1, 9 Kuhlbrodt K....Wegner M. (1998)
    4. The high-mobility-group domain of Sox proteins interacts with DNA-binding domains of many transcription factors. (PubMed id 16582099)1 Wissmuller S....Wegner M. (2006)
    5. A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070)1 Stelzl U.... Wanker E.E. (2005)
    6. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621)2 Hillier L.W....Wilson R.K. (2005)
    7. Human class III POU genes, POU3F1 and POU3F3, map to chromosomes 1p34.1 and 3p14.2. (PubMed id 9457692)1 Sumiyama K....Ueda S. (1998)
    8. The class III POU factor Brn-4 interacts with other class III POU factors and the heterogeneous nuclear ribonucleoprotein U. (PubMed id 9105675)1 Malik K.F....Young W.S. (1997)
    9. Identification of Pax2-regulated genes by expression profiling of the mid-hindbrain organizer region. (PubMed id 15872005)9 Bouchard M....Busslinger M. (2005)
    10. Redundancy of class III POU proteins in the oligodendrocyte lineage. (PubMed id 9405434)9 Schreiber J....Wegner M. (1997)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5455 HGNC: 9216 AceView: POU3F3 Ensembl:ENSG00000198914 euGenes: HUgn5455
    ECgene: POU3F3 H-InvDB: POU3F3

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for POU3F3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for POU3F3 gene:
    Search GeneIP for patents involving POU3F3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for POU3F3  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for POU3F3   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for POU3F3  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for POU3F3   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for POU3F3   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for POU3F3  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for POU3F3   OriGene Custom Protein Services for POU3F3  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat POU3F3
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing POU3F3
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat POU3F3
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat POU3F3
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat POU3F3
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat POU3F3
     GenScript Custom Purified and Recombinant Proteins Services for POU3F3 GenScript cDNA clones with any tag delivered in your preferred vector for POU3F3
     GenScript Custom Assay Services for POU3F3 GenScript Custom Superior Antibodies Services for POU3F3
     GenScript Custom overexpressing Cell Line Services for POU3F3 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in POU3F3 promoter
     Search Chromatin IP Primers for POU3F3
     RT2 qPCR Primer Assay in human, mouse, rat POU3F3
     Search GNC Networks for POU3F3
     SABiosciences PCR Arrays including human, mouse, rat POU3F3
     Search Tocris compounds for POU3F3
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     POU3F3 antibodies
     POU3F3 proteins
     Search for Antibodies for POU3F3 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for POU3F3
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     Browse ELISAs, CLIAs, Proteins, and Antibodies at Uscn
     Search LifeMap BioReagents cell lines for POU3F3
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for POU3F3
     Browse SwitchGear 3'UTR luciferase reporter plasmids for POU3F3
     Browse SwitchGear Promoter luciferase reporter plasmids for POU3F3
     ThermoFisher Antibodies for POU3F3
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat POU3F3
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      POU3F3 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4