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Aliases for PNMA6E Gene

Aliases for PNMA6E Gene

  • Paraneoplastic Ma Antigen Family Member 6E 2 3
  • U82695.5 5

External Ids for PNMA6E Gene

Summaries for PNMA6E Gene

GeneCards Summary for PNMA6E Gene

PNMA6E (Paraneoplastic Ma Antigen Family Member 6E) is a Protein Coding gene. An important paralog of this gene is PNMA6F.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PNMA6E Gene

Genomics for PNMA6E Gene

Regulatory Elements for PNMA6E Gene

Enhancers for PNMA6E Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG153380 1.2 Ensembl ENCODE 0.4 +19.6 19591 1.8 HDAC1 PKNOX1 ATF1 FOXA2 RB1 BMI1 ZNF48 RAD21 TCF12 GLIS2 ZNF275 PNMA6E GC0XP153357
GH0XG153383 0.8 FANTOM5 0.4 +18.0 18014 0.3 ZNF493 ZNF140 ZNF266 ZNF155 ZNF791 ZNF157 ADNP ZNF621 MNT ZNF645 HCFC1 EMD LOC105373383 PNMA6B SLC6A8 ZNF275 PNMA6E GC0XP153357
GH0XG153381 0.9 FANTOM5 0.3 +21.3 21262 0.3 HDAC1 PKNOX1 ATF1 NFIB NFRKB ZNF766 GATA2 ELK1 CREM CEBPB ZNF275 GC0XP153357 PNMA6E
GH0XG153369 0.8 ENCODE 0.3 +30.3 30342 2.5 CTCF ZNF175 FEZF1 ZIC2 RAD21 ZNF335 GLIS2 POLR2A SMC3 ZNF654 ZNF275 GC0XP153357 PNMA6E
GH0XG153382 0.7 ENCODE 0.3 +20.7 20683 0.2 ZNF639 ATF1 ZNF197 NFRKB BACH1 ZNF175 ZNF644 TFDP1 ZNF766 ZNF589 PNMA6E GC0XP153357
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around PNMA6E on UCSC Golden Path with GeneCards custom track

Genomic Location for PNMA6E Gene

Chromosome:
X
Start:
153,395,640 bp from pter
End:
153,401,420 bp from pter
Size:
5,781 bases
Orientation:
Minus strand

Genomic View for PNMA6E Gene

Genes around PNMA6E on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PNMA6E Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PNMA6E Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for PNMA6E Gene

Proteins for PNMA6E Gene

  • Protein details for PNMA6E Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0J9YXH5
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A0J9YXH5

    Protein attributes for PNMA6E Gene

    Size:
    369 amino acids
    Molecular mass:
    39836 Da
    Quaternary structure:
    No Data Available
  • Protein details for PNMA6E Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0J9YXQ4
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A0J9YXQ4

    Protein attributes for PNMA6E Gene

    Size:
    647 amino acids
    Molecular mass:
    65155 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PNMA6E Gene

Post-translational modifications for PNMA6E Gene

No Post-translational modifications

Other Protein References for PNMA6E Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for PNMA6E Gene

Domains & Families for PNMA6E Gene

Gene Families for PNMA6E Gene

Protein Domains for PNMA6E Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PNMA6E: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PNMA6E Gene

Function for PNMA6E Gene

Phenotypes for PNMA6E Gene

genes like me logo Genes that share phenotypes with PNMA6E: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PNMA6E Gene

Localization for PNMA6E Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PNMA6E Gene

Pathways & Interactions for PNMA6E Gene

SuperPathways for PNMA6E Gene

No Data Available

Interacting Proteins for PNMA6E Gene

Gene Ontology (GO) - Biological Process for PNMA6E Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PNMA6E Gene

Drugs & Compounds for PNMA6E Gene

No Compound Related Data Available

Transcripts for PNMA6E Gene

mRNA/cDNA for PNMA6E Gene

(2) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PNMA6E Gene

No ASD Table

Relevant External Links for PNMA6E Gene

GeneLoc Exon Structure for
PNMA6E
ECgene alternative splicing isoforms for
PNMA6E

Expression for PNMA6E Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PNMA6E Gene

Orthologs for PNMA6E Gene

Evolution for PNMA6E Gene

ENSEMBL:
Gene Tree for PNMA6E (if available)
TreeFam:
Gene Tree for PNMA6E (if available)

No data available for Orthologs for PNMA6E Gene

Paralogs for PNMA6E Gene

Pseudogenes.org Pseudogenes for PNMA6E Gene

genes like me logo Genes that share paralogs with PNMA6E: view

Variants for PNMA6E Gene

Relevant External Links for PNMA6E Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PNMA6E

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PNMA6E Gene

Disorders for PNMA6E Gene

No disorders were found for PNMA6E Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PNMA6E Gene

Publications for PNMA6E Gene

  1. Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow. (PMID: 27250503) Wright J.C. … Harrow J. (Nat Commun 2016) 2 3 64

Products for PNMA6E Gene

Sources for PNMA6E Gene

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