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Aliases for PNMA6B Gene

Aliases for PNMA6B Gene

  • Paraneoplastic Ma Antigen Family Member 6B (Pseudogene) 2 3
  • Paraneoplastic Ma Antigen Family Member 6D (Pseudogene) 2 3
  • Paraneoplastic Antigen Like 6B 2 3
  • Paraneoplastic Antigen Like 6D 2 3
  • Paraneoplastic Ma Antigen Family Member 6B 2
  • Paraneoplastic Ma Antigen Family Member 6D 2
  • PNMA6D 3

External Ids for PNMA6B Gene

Previous Symbols for PNMA6B Gene

  • PNMA6D

Summaries for PNMA6B Gene

GeneCards Summary for PNMA6B Gene

PNMA6B (Paraneoplastic Ma Antigen Family Member 6B (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PNMA6B Gene

Genomics for PNMA6B Gene

Genomic Location for PNMA6B Gene

Start:
153,075,769 bp from pter
End:
153,077,575 bp from pter
Size:
1,807 bases
Orientation:
Minus strand

Genomic View for PNMA6B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PNMA6B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PNMA6B Gene

No data available for Regulatory Elements for PNMA6B Gene

Proteins for PNMA6B Gene

  • Protein details for PNMA6B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C5W0-PNM6B_HUMAN
    Recommended name:
    Paraneoplastic antigen-like protein 6B
    Protein Accession:
    P0C5W0
    Secondary Accessions:

    Protein attributes for PNMA6B Gene

    Size:
    399 amino acids
    Molecular mass:
    44006 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PNMA6B Gene

Proteomics data for PNMA6B Gene at MOPED

Post-translational modifications for PNMA6B Gene

No data available for DME Specific Peptides for PNMA6B Gene

Domains for PNMA6B Gene

Gene Families for PNMA6B Gene

HGNC:
  • PNMA :Paraneoplastic Ma antigens

Protein Domains for PNMA6B Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for PNMA6B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0C5W0

UniProtKB/Swiss-Prot:

PNM6B_HUMAN
Family:
  • Belongs to the PNMA family.:
    • P0C5W0
genes like me logo Genes that share domains with PNMA6B: view

Function for PNMA6B Gene

Gene Ontology (GO) - Molecular Function for PNMA6B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with PNMA6B: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for PNMA6B Gene

Localization for PNMA6B Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for PNMA6B Gene COMPARTMENTS Subcellular localization image for PNMA6B gene
Compartment Confidence
cytosol 1
mitochondrion 1
nucleus 1

Gene Ontology (GO) - Cellular Components for PNMA6B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA --
genes like me logo Genes that share ontologies with PNMA6B: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for PNMA6B Gene

Pathways for PNMA6B Gene

SuperPathways for PNMA6B Gene

No Data Available

Interacting Proteins for PNMA6B Gene

Gene Ontology (GO) - Biological Process for PNMA6B Gene

None

No data available for Pathways by source for PNMA6B Gene

Transcripts for PNMA6B Gene

mRNA/cDNA for PNMA6B Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PNMA6B Gene

No ASD Table

Relevant External Links for PNMA6B Gene

GeneLoc Exon Structure for
PNMA6B
ECgene alternative splicing isoforms for
PNMA6B

Expression for PNMA6B Gene

mRNA expression in normal human tissues for PNMA6B Gene

mRNA expression in normal human tissues for PNMA6B Gene

mRNA differential expression in normal tissues according to GTEx for PNMA6B Gene

This gene is overexpressed in Brain - Hypothalamus (12.0), Brain - Frontal Cortex (BA9) (11.4), Brain - Anterior cingulate cortex (BA24) (7.7), Brain - Cortex (5.6), and Brain - Substantia nigra (4.3).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for PNMA6B Gene

genes like me logo Genes that share expressions with PNMA6B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for PNMA6B Gene

Orthologs for PNMA6B Gene

Evolution for PNMA6B Gene

ENSEMBL:
Gene Tree for PNMA6B (if available)
TreeFam:
Gene Tree for PNMA6B (if available)

No data available for Orthologs for PNMA6B Gene

Paralogs for PNMA6B Gene

Selected SIMAP similar genes for PNMA6B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with PNMA6B: view

No data available for Paralogs for PNMA6B Gene

Variants for PNMA6B Gene

Relevant External Links for PNMA6B Gene

HapMap Linkage Disequilibrium report
PNMA6B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for PNMA6B Gene

Disorders for PNMA6B Gene

No disorders were found for PNMA6B Gene.

No data available for UniProtKB/Swiss-Prot for PNMA6B Gene

Publications for PNMA6B Gene

  1. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4
  2. The human PNMA family: novel neuronal proteins implicated in paraneoplastic neurological disease. (PMID: 16214224) Schueller M. … Voltz R. (J. Neuroimmunol. 2005) 3
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. Comparative genome sequence analysis of the Bpa/Str region in mouse and man. (PMID: 10854409) Mallon A.-M. … Brown S.D.M. (Genome Res. 2000) 3
  5. Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. (PMID: 11256614) Simpson J.C. … Wiemann S. (EMBO Rep. 2000) 3

Products for PNMA6B Gene

Sources for PNMA6B Gene

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