PLEK2 Gene
protein-coding GIFtS : 51
GCID: GC14 M067853
pleckstrin 2
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Aliasesfor PLEK2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Pleckstrin 2 1 2 Pleckstrin 2 Homolog2 Pleckstrin-21
Export aliases for PLEK2 gene to outside databases Previous GC identifers: GC14M065358 GC14M061647 GC14M065843 GC14M066923 GC14M048023
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Summariesfor PLEK2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: PLEK2_HUMAN, Q9NYT0 Function : May help orchestrate cytoskeletal arrangement. Contribute to lamellipodia formationGene Wiki entry for PLEK2
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Genomic Viewsfor PLEK2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000014.8 NC_018925.1 NT_026437.12 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PLEK2 gene promoter: c-Fos Elk-1 NF-1 AP-1 JunB ATF-2 Fra-1 FosB Olf-1 c-Jun Other transcription factors Search SABiosciences Chromatin IP Primers for PLEK2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PLEK2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 14q23.3 Ensembl cytogenetic band: 14q23.3 HGNC cytogenetic band: 14q23.3 PLEK2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 14 GeneLoc Exon Structure
GeneLoc location for GC14M067853: view genomic region
(about GC identifiers )
Start:
67,853,700 bp from pter
End:
67,878,917 bp from pter
Size:
25,218 bases
Orientation:
minus strand
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Proteinsfor PLEK2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: PLEK2_HUMAN, Q9NYT0 (See
protein sequence )Recommended Name: Pleckstrin-2 Size : 353 amino acids; 39971 Da
Subcellular location : Cell projection, lamellipodium membrane; Peripheral membrane protein. Cytoplasm, cytoskeleton
1 PDB 3D structure from and Proteopedia for PLEK2 :1X1G (3D)
 
Secondary accessions : Q96JT0Explore the universe of human proteins at neXtProt for PLEK2: NX_Q9NYT0 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q9NYT0 PLEK2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_057529.1 ENSEMBL proteins: ENSP00000216446 ENSP00000450533 ENSP00000451218 ENSP00000450892 ENSP00000451023 Human Recombinant Protein Products: Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view) : About this table
PLEK2 for ontologies About GeneDecksing PLEK2 Antibody Products: Assay Products for PLEK2:
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Protein
Domains / Familiesfor PLEK2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PLEK2 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q9NYT0 ProtoNet protein and cluster: Q9NYT0
2 Blocks protein families : IPB000591 Pleckstrin putative G-protein interacting domain IPB001849 Pleckstrin-like UniProtKB/Swiss-Prot: PLEK2_HUMAN, Q9NYT0 Similarity : Contains 1 DEP domainSimilarity : Contains 2 PH domains
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Functionfor PLEK2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: PLEK2_HUMAN, Q9NYT0 Function : May help orchestrate cytoskeletal arrangement. Contribute to lamellipodia formation
Genatlas biochemistry entry for PLEK2 : pleckstrin 2 mouse homolog,ubiquitously expressed Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PLEK2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PLEK2 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: PLEK2 (NM_016445 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PLEK2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PLEK2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PLEK2
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005543 phospholipid binding
IEA --
PLEK2 for ontologies About GeneDecksing 1 GenomeRNAi human phenotype for PLEK2 :
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Pathways & Interactionsfor PLEK2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PLEK2 STRING Interaction
Network Preview (showing 3 interactants - click image to see more details)3 Interacting proteins for PLEK2 (ENSP00000216446 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table Gene Ontology (GO): 2 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0030036 actin cytoskeleton organization
TAS 10419454 GO:0035556 intracellular signal transduction
IEA --
PLEK2 for ontologies About GeneDecksing
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Drugs & Compoundsfor PLEK2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
PLEK2 for compounds About GeneDecksing Browse Tocris compounds for PLEK2 1 Novoseek chemical compound relationship for PLEK2 gene About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
phosphatidylinositol
53.2
10
17658464 (5), 17008542 (1)
Search CenterWatch for drugs/clinical trials and news about PLEK2
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Transcriptsfor PLEK2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for PLEK2 gene: NM_016445.1 Unigene Cluster for PLEK2:
Pleckstrin 2 Hs.170473 [show with all ESTs ] Unigene Representative Sequence: BM913044 6 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000216446 (uc001xjh.1 ) ENST00000556532 ENST00000555803 ENST00000554395 ENST00000553387 ENST00000557388 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PLEK2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PLEK2 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: PLEK2 (NM_016445 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for PLEK2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PLEK2
Additional cDNA sequence: AF228603.1 BC001226.1 BC008056.2
11 DOTS entries : DT.113624 DT.92428851
DT.100775591 DT.120743232 DT.100021957 DT.120743185 DT.120743246 DT.97844865 DT.100811060 DT.95153775 DT.95164142 24/142 AceView cDNA sequences (see all 142 ):
AI123234 AI693773 BE466310 AI471844 CR621991 CA314754 BM914903 CB121766 BM810913 BG326078 BM752808 BC008056 BM553391 AW139577 BM550895 BM561314 AI805043 AA757995 BM809704 BM772156 NM_016445 AA613815 AA776304 AF228603 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for PLEK2 About this scheme ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b SP1 :                       SP2 :       -   -   -             SP3 :           -            
ECgene alternative splicing isoforms for PLEK2
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Expression for PLEK2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section PLEK2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CCATAATGTT
About this image PLEK2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Kidney Renal Vesicle Kidney Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
Stem Cell Differentiation: 2 LifeMap Cells Name Category PureStem™ epithelial progenitor E164 (Embryonic Progenitor Cell)Intermediate Mesoderm, Kidney PureStem™ progenitor E44 (Embryonic Progenitor Cell)
See PLEK2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for PLEK2 SOURCE GeneReport for Unigene cluster: Hs.170473 SABiosciences Expression via Pathway-Focused PCR Array including PLEK2 : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PLEK2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat PLEK2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PLEK2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PLEK2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PLEK2
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Orthologsfor PLEK2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for PLEK2 gene from 4/13 species (see all 13 ) About this table
ENSEMBL Gene Tree for PLEK2 (if available)TreeFam Gene Tree for PLEK2 (if available)
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Paralogsfor PLEK2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for PLEK2 gene PLEK 2 4 SIMAP similar genes for PLEK2 using alignment to 5 protein entries: PLEK2_HUMAN (see all proteins ):PLEK AKT2 FAM109A SWAP70
PLEK2 for paralogs About GeneDecksing
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Genomic Variantsfor PLEK2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 14 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for PLEK2 (67853700 - 67878917 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 2 variations for PLEK2 2 CNVs : 35260 8772
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PLEK2
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Disorders
/ Diseasesfor PLEK2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
PLEK2 for disorders About GeneDecksing
OMIM gene information: 608007
OMIM disorders : --6 diseases for PLEK2 : About MalaCards proctitis pyuria pyosalpinx ulcerative proctitis clonorchiasis melanoma 2 diseases from the University of Copenhagen DISEASES database for PLEK2 :Pyosalpinx Clonorchiasis Export disorders for PLEK2 gene to outside databases
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Publicationsfor PLEK2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for PLEK2 gene, integrated from 9 sources (see all 15 ): (articles sorted by number of sources associating them with PLEK2) Utopia : connect your pdf to the dynamic world of online information
Pleckstrin-2 selectively interacts with phosphatidylinositol 3-kinase lipid products and regulates actin organization and cell spreading. (PubMed id 17658464) 1 , 3, 9 Hamaguchi N....Fukui Y. (2007) Pleckstrin homology domains and the cytoskeleton. (PubMed id 11911883) 1 , 3, 9 Lemmon M.A....Abrams C.S. (2002) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) PI3K regulates pleckstrin-2 in T-cell cytoskeletal reorganization. (PubMed id 17008542) 1 , 9 Bach T.L....Abrams C.S. (2007) Pleckstrin 2, a widely expressed paralog of pleckstrin involved in actin rearrangement. (PubMed id 10419454) 1 , 9 Hu M.H....Abrams C.S. (1999) Cloning, expression and chromosomal assignment of human pleckstrin 2. (PubMed id 15865208) 1 , 9 Inazu T....Miyamoto K. (2005) A census of human soluble protein complexes. (PubMed id 22939629) 1 Havugimana P.C....Emili A. (2012) Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983) 1 Kim W....Gygi S.P. (2011) Transcriptome profiling of whole blood cells identifi es PLEK2 and C1QB in human melanoma. (PubMed id 21698244) 1 Luo Y....Fujita M. (2011) Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348) 1 Barbe L....Andersson-Svahn H. (2008)
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External Searches for PLEK2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing PLEK2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing PLEK2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing PLEK2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for PLEK2 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for PLEK2 gene: Search GeneIP for patents involving PLEK2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PLEK2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for PLEK2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for PLEK2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for PLEK2 OriGene Protein Over-expression Lysate for PLEK2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for PLEK2 OriGene 3'-UTR Clone for PLEK2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for PLEK2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for PLEK2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for PLEK2 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for PLEK2 OriGene Custom Protein Services for PLEK2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PLEK2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing PLEK2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat PLEK2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat PLEK2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat PLEK2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat PLEK2
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PLEK2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PLEK2
Search ThermoFisher Antibodies for PLEK2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat PLEK2
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