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Aliases & Descriptions for PLCG1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases 1-phosphatidyl-D-myo-inositol-4,5-bisphosphate 2 EC 3.1.4.11 3 OTTHUMP00000031787 2 OTTHUMP00000178982 2 PLC-148 3 PLC-II 1 , 2 , 3 PLC-gamma-1 2 , 3 PLC1 2 , 3 , 5 PLC148 1 , 2 PLCgamma1 1 , 2 inositoltrisphosphohydrolase 2
Descriptions 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 2 Phosphoinositide phospholipase C 2 , 3 Phospholipase C-gamma-1 3 monophosphatidylinositol phosphodiesterase 2 phosphatidylinositol phospholipase C 2 phosphoinositidase C 2 phospholipase C, gamma 1 2 phospholipase C, gamma 1 (formerly subtype 148) 1 , 2 phospholipase C-148 2 triphosphoinositide phosphodiesterase 2
Search outside databases for aliases for PLCG1 genePrevious GC identifers: GC20P039494 GC20P040404 GC20P040451
Summaries for PLCG1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for PLCG1 : The protein encoded by this gene catalyzes the formation of inositol 1,4,5-trisphosphate anddiacylglycerol from phosphatidylinositol 4,5-bisphosphate. This reaction uses calcium as acofactor and plays an important role in the intracellular transduction of receptor-mediatedtyrosine kinase activators. For example, when activated by SRC, the encoded protein causes the Rasguanine nucleotide exchange factor RasGRP1 to translocate to the Golgi, where it activates Ras.Also, this protein has been shown to be a major substrate for heparin-binding growth factor 1(acidic fibroblast growth factor)-activated tyrosine kinase. Two transcript variants encodingdifferent isoforms have been found for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: PLCG1_HUMAN, P19174 Function : PLC-gamma is a major substrate for heparin-binding growth factor 1 (acidic fibroblastgrowth factor)-activated tyrosine kinase
Gene Wiki entry for PLCG1
Genomic Location for PLCG1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the PLCG1 gene Entrez Gene cytogenetic band: 20q12-q13.1 Ensembl cytogenetic band: 20q12 HGNC cytogenetic band: 20q12-q13.1 PLCG1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 20 GeneLoc Exon Structure
GeneLoc location for GC20P039199:
(about GC identifiers )
Start:
39,199,014 bp from pter
End:
39,237,775 bp from pter
Size:
38,762 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000020.9 NT_011362.9 Proteins for PLCG1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: PLCG1_HUMAN, P19174 (See
protein sequence )Recommended Name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1 Size : 1290 amino acids; 148532 Da
Cofactor : Calcium
Subunit : Interacts with AGAP2 via its SH3 domain (By similarity). Interacts with phosphorylated LATupon TCR activation. Interacts with the Pro-rich domain of TNK1 via its SH3 domain. Associateswith BLNK, VAV1, GRB2 and NCK1 in a B-cell antigen receptor-dependent fashion. Interacts with CBLBin activated T-cells; which inhibits phosphorylation. Interacts with SHB. Interacts via its SH3domain with the Arg/Gly-rich-flanked Pro-rich domains of KHDRBS1/SAM68. This interaction isselectively regulated by arginine methylation of KHDRBS1/SAM68. Interacts with INPP5D/SHIP1 andCLNK (By similarity). Interacts with RALGPS1. Interacts (via SH3 domain) with HEV ORF3 protein
PDB structure from and Proteopedia : 1HSQ (3D)
 2HSP (3D)
 
Secondary accessions : Q2V575
Post-translational modifications:
The receptor-mediated activation of PLC-gamma-1 and PLC-gamma-2 involves their phosphorylation bytyrosine kinases in response to ligation of a variety of growth factor receptors and immune systemreceptors1
Ubiquitinated by CBLB in activated T-cells (By similarity)1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_002651.2 NP_877963.1 ENSEMBL proteins: ENSP00000362368 ENSP00000244007 ENSP00000362369 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for PLCG1: Assays for PLCG1:
Protein
Domains/ Families for PLCG1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P19174 ProtoNet protein and cluster: P19174
5 Blocks protein families : IPB000008 C2 domain IPB000909 Phosphatidylinositol-specific phospholipase C IPB000980 SH2 domain signature IPB001452 SH3 domain signature IPB001849 Pleckstrin-like UniProtKB/Swiss-Prot: PLCG1_HUMAN, P19174 Domain : The SH3 domain mediates interaction with CLNK (By similarity). The SH3 domain also mediatesinteraction with RALGPS1 Similarity : Contains 1 C2 domainSimilarity : Contains 1 EF-hand domainSimilarity : Contains 2 PH domainsSimilarity : Contains 1 PI-PLC X-box domainSimilarity : Contains 1 PI-PLC Y-box domainSimilarity : Contains 2 SH2 domainsSimilarity : Contains 1 SH3 domain
Gene Function for PLCG1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (PLCG1 ) Millipore RNAi Products for the Analysis of PLCG1 Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (PLCG1 )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_182811 Applied Biosystems Silencer ® siRNAs for PLCG1 Sigma-Aldrich siRNA and siRNA Panels for PLCG1 Sigma-Aldrich shRNA for PLCG1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_002660                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_002660                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_002660  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002660 UniProtKB/Swiss-Prot: PLCG1_HUMAN, P19174 Function : PLC-gamma is a major substrate for heparin-binding growth factor 1 (acidic fibroblastgrowth factor)-activated tyrosine kinase Catalytic activity : 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1D-myo-inositol1,4,5-trisphosphate + diacylglycerol Enzyme Number (IUBMB): EC 3.1.4.11
Genatlas biochemistry entry for PLCG1 :phospholipase C,gamma 1 (subtype 148),phosphatidylinositol specific,involved in signaltransduction,directly interacting with phosphorylated PTK2 to promote adhesion-dependentassociation of the two molecules and increase inositol-phosphate production (mouse fibroblasts)
5 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Plcg1) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for PLCG1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/50 Sigma-Aldrich "Your Favorite Gene" Pathways for PLCG1 (Your Favorite Gene powered by Ingenuity) (see all 50
) Gene Network CentralTM Interacting Genes and Proteins Network for PLCG1 5/347 Interacting proteins for PLCG1 (ENSP00000362369 3 P19174 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 347
)About this table 4 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007242 intracellular signaling cascade
IEA -- GO:0009395 phospholipid catabolic process
IEA -- GO:0016042 lipid catabolic process
IEA -- GO:0044419 interspecies interaction between organisms
IEA --
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Drugs & Compounds for PLCG1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Compounds for PLCG1 available from Tocris Bioscience Compound Action
CAS
number AACOCF3 Phospholipase A2 inhibitor [149301-79-1] U 73122 Phospholipase C inhibitor [112648-68-7] D609 Selective PC-PLC inhibitor [83373-60-8]
About this table 10/29 Novoseek chemical compound relationships for PLCG1 gene (see all 29
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
phosphatidylinositol
83.85
242
1814635 (3), 1657936 (3), 1789410 (3), 9136078 (3) (see all 99 )
inositol 1,2-cyclic phosphate
82.43
3
12630878 (1), 2175645 (1), 9003188 (1)
tyrosine
82.33
526
9570517 (7), 1533389 (6), 1372020 (6), 11502583 (6) (see all 99 )
inositol 1,4,5 trisphosphate
70.74
45
8327490 (3), 1380035 (1), 8717070 (1), 19179337 (1) (see all 35 )
phosphotyrosine
69.89
18
8555205 (1), 10987838 (1), 11208605 (1), 8943348 (1) (see all 16 )
pp36
69.25
1
7544353 (1)
phosphoinositide
65.61
22
8653074 (2), 9148771 (2), 17558519 (2), 8641669 (1) (see all 15 )
pip2
64.15
19
7673143 (3), 7487955 (2), 10085141 (2), 8641669 (1) (see all 11 )
lysosulfatide
61.16
1
14511654 (1)
calcium
60.14
155
15872086 (4), 8940074 (4), 16973916 (4), 12632103 (4) (see all 90 )
About this table
Transcripts for PLCG1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (PLCG1 ) Millipore RNAi Products for the Analysis of PLCG1 Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (PLCG1 )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_182811 Sigma-Aldrich siRNA and siRNA Panels for PLCG1 Sigma-Aldrich shRNA for PLCG1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_002660 NM_182811
REFSEQ mRNAs for PLCG1 gene (2 alternative transcripts): NM_002660.2 NM_182811.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002660 NM_182811
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_002660                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_002660                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_002660  
Additional cDNA sequence: AB210028.1 AF147391.1 AK098745.1 AK297370.1 AK309606.1 AL110247.1 BC131750.1 BC136466.1 BC144136.1 M34667.1
21 DOTS entries : DT.86842930 DT.100646071 DT.102842995 DT.86844955 DT.100657845 DT.91918243 DT.95345097 DT.120819530 DT.92010662 DT.95291216 DT.92433180 DT.97820201 DT.100649850 DT.120819556 DT.92034936 DT.92433177 DT.95253741 DT.95353236 DT.95353248 DT.100708296 DT.120819573
24/183 AceView cDNA sequences (see all 183
):AI832699 BU741495 BU164407 AA778686 AA441941 BM557119 BX458827 BQ882869 BE350139 AL110247 CD672666 BM450712 BM711309 AW851295 AA902444 BQ069687 AA641649 BM561485 NM_182811 AL708196 BQ440546 AI187110 BX280811 BF060861
highest scoring ESTs for PLCG1 :M34667 AA331680 AA385590 AA441941 AA442054 AA476669 AA641649 AA778686 AA852993 AA902444
Unigene Cluster for PLCG1: Phospholipase C, gamma 1 Hs.268177 [show with all ESTs ] Unigene Representative Sequence: AB210028 GeneLoc Exon Structure 5/12 Alternative Splicing Database (ASD) splice patterns (SP) for PLCG1 (see all 12
) ExUns: 1 ^ 2a · 2b · 2c · 2d ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13a · 13b ^ 14 ^ 15 ^ 16a · 16b ^ 17 ^ 18a · SP1 :             -       -           -                         SP2 :                                                     SP3 :                                                     SP4 :   -           -                                         SP5 :             -                                        
ExUns: 18b ^ 19 ^ 20 ^ 21a · 21b ^ 22a · 22b ^ 23 ^ 24 ^ 25a · 25b ^ 26a · 26b ^ 27 ^ 28a · 28b · 28c ^ 29 ^ 30 ^ 31 ^ 32 ^ 33a · 33b ^ 34a · 34b SP1 : -           -           -     -                           SP2 :                     -     -                           SP3 :                                                   SP4 :                                                   SP5 :                                                  
About this scheme ECgene alternative splicing isoforms for PLCG1 3 Ensembl transcripts including schematic representations : ENST00000373271
ENST00000244007
ENST00000373272
Expression for PLCG1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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PLCG1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for PLCG1 1 / 2 / 3
6 probe-sets matching PLCG1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TCCTTAAAAASOURCE GeneReport for Unigene cluster: Hs.268177 Expression variation in blood from EXPOLDB for PLCG1
Orthologs for PLCG1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for PLCG1 gene from 5/13 species (see all 13
)
About this table Species with no ortholog for PLCG1 ENSEMBL Gene Tree for PLCG1 Paralogs for PLCG1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for PLCG1 gene PLCG2 2 PLCL2 2 PLCL1 2
SNPs/Variants for PLCG1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for PLCG1 (up to first 250kb)
Disorders & Mutations for PLCG1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 172420 10/35 Novoseek disease relationships for PLCG1 gene (see all 35
)
About this table Genetic Association Database: PLCG1 Human Genome Epidemiology Navigator: PLCG1 (4 documents)
Medical News for PLCG1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for PLCG1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/869 PubMed articles for PLCG1 gene (see all 869
): Characterization and cDNA cloning of phospholipase C-gamma, a major substrate for heparin-binding growth factor 1 (acidic fibroblast growth factor)-activated tyrosine kinase. (PubMed id 2167438) 2, 3, 4 Burgess W.H.... Jaye M. (1990) Requirement of the Src homology 2 domain protein Shb for T cell receptor-dependent activation of the interleukin-2 gene nuclear factor for activation of T cells element in Jurkat T cells. (PubMed id 10488157) 1, 3, 4 Lindholm C.K.... Welsh M. (1999) Identification of three polymorphisms in the translated region of PLC-gamma1 and their investigation in lithium responsive bipolar disorder. (PubMed id 11353454) 1, 3, 6 Ftouhi-Paquin N....Turecki G. (2001) The phospholipase C-gamma1 gene (PLCG1) and lithium-responsive bipolar disorder: re-examination of an intronic dinucleotide repeat polymorphism. (PubMed id 11409699) 1, 3, 6 Lovlie R....Steen V.M. (2001) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 3, 4 Olsen J.V....Mann M. (2006) Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455) 3, 4 Rush J.... Comb M.J. (2005) Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules. (PubMed id 15951569) 3, 4 Zhang Y.... White F.M. (2005) Deficiency of BLNK hampers PLC-gamma2 phosphorylation and Ca2+ influx induced by the pre-B-cell receptor in human pre-B cells. (PubMed id 15270728) 3, 4 Taguchi T.... Fujimoto J. (2004) The DNA sequence and comparative analysis of human chromosome 20. (PubMed id 11780052) 3, 4 Deloukas P....Rogers J. (2001) Characterization of the tyrosine kinase Tnk1 and its binding with phospholipase C-gamma1. (PubMed id 10873601) 3, 4 Felschow D.M.... Hoehn G.T. (2000)
Search for PLCG1
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Genome Databases showing PLCG1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing PLCG1
(According to HUGE )
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--
Specialized Databases showing PLCG1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Name Description
NIEHS-SNPs http://egp.gs.washington.edu/data/plcg1/
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-- Services for PLCG1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for PLCG1:
Antibodies & Assays for PLCG1  
Tocris compounds for PLCG1
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009