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PLCG1 Gene

protein-coding   GIFtS: 71

GC20P039199
phospholipase C, gamma 1
(Previous names: phospholipase C, gamma 1 (formerly subtype 148) )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: PLC1)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
1-phosphatidyl-D-myo-inositol-4,5-bisphosphate 2
EC 3.1.4.11 3
OTTHUMP00000031787 2
OTTHUMP00000178982 2
PLC-148 3
PLC-II 1, 2, 3
PLC-gamma-1 2, 3
PLC1 2, 3, 5
PLC148 1, 2
PLCgamma1 1, 2
inositoltrisphosphohydrolase 2
Descriptions
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
gamma 1 2
Phosphoinositide phospholipase C 2, 3
Phospholipase C-gamma-1 3
monophosphatidylinositol phosphodiesterase 2
phosphatidylinositol phospholipase C 2
phosphoinositidase C 2
phospholipase C, gamma 1 2
phospholipase C, gamma 1 (formerly subtype 148) 1, 2
phospholipase C-148 2
triphosphoinositide phosphodiesterase 2
External Ids
HGNC: 90651
Entrez Gene: 53352
UniProtKB: P191743
Ensembl: ENSG000001241817
Search outside databases for aliases for PLCG1 gene

Previous GC identifers: GC20P039494 GC20P040404 GC20P040451

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for PLCG1:
The protein encoded by this gene catalyzes the formation of inositol 1,4,5-trisphosphate and
diacylglycerol from phosphatidylinositol 4,5-bisphosphate. This reaction uses calcium as a
cofactor and plays an important role in the intracellular transduction of receptor-mediated
tyrosine kinase activators. For example, when activated by SRC, the encoded protein causes the Ras
guanine nucleotide exchange factor RasGRP1 to translocate to the Golgi, where it activates Ras.
Also, this protein has been shown to be a major substrate for heparin-binding growth factor 1
(acidic fibroblast growth factor)-activated tyrosine kinase. Two transcript variants encoding
different isoforms have been found for this gene. [provided by RefSeq]

UniProtKB/Swiss-Prot: PLCG1_HUMAN, P19174
Function: PLC-gamma is a major substrate for heparin-binding growth factor 1 (acidic fibroblast
growth factor)-activated tyrosine kinase

Gene Wiki entry for PLCG1

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the PLCG1 gene  

Entrez Gene cytogenetic band: 20q12-q13.1   Ensembl cytogenetic band:  20q12   HGNC cytogenetic band: 20q12-q13.1

PLCG1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20P039199:     (about GC identifiers)

Start:
39,199,014 bp from pter
End:
39,237,775 bp from pter
Size:
38,762 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000020.9  NT_011362.9  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: PLCG1_HUMAN, P19174 (See protein sequence)
Recommended Name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1  
Size: 1290 amino acids; 148532 Da
Cofactor: Calcium
Subunit: Interacts with AGAP2 via its SH3 domain (By similarity). Interacts with phosphorylated LAT
upon TCR activation. Interacts with the Pro-rich domain of TNK1 via its SH3 domain. Associates
with BLNK, VAV1, GRB2 and NCK1 in a B-cell antigen receptor-dependent fashion. Interacts with CBLB
in activated T-cells; which inhibits phosphorylation. Interacts with SHB. Interacts via its SH3
domain with the Arg/Gly-rich-flanked Pro-rich domains of KHDRBS1/SAM68. This interaction is
selectively regulated by arginine methylation of KHDRBS1/SAM68. Interacts with INPP5D/SHIP1 and
CLNK (By similarity). Interacts with RALGPS1. Interacts (via SH3 domain) with HEV ORF3 protein
PDB structure from and Proteopedia :
1HSQ (3D)    2HSP (3D)    
Secondary accessions: Q2V575

Post-translational modifications:

  • The receptor-mediated activation of PLC-gamma-1 and PLC-gamma-2 involves their phosphorylation by
    tyrosine kinases in response to ligation of a variety of growth factor receptors and immune system
    receptors1
  • Ubiquitinated by CBLB in activated T-cells (By similarity)1
  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_002651.2  NP_877963.1  


    ENSEMBL proteins: 
    ENSP00000362368 ENSP00000244007 ENSP00000362369 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Enzo Life Sciences proteins for PLCG1
    Recombinant Proteins from Abcam (Phospholipase C gamma 1)
    Human Recombinant Proteins from Abnova (PLCG1)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    4 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005575 cellular_component ND--
    GO:0005737 cytoplasm IDA15702972
    GO:0005829 cytosol EXP10350061 11048639
    GO:0005886 plasma membrane EXP11048639
    About this table

    Antibodies for PLCG1: 
    Invitrogen Antibodies for PLCG1
    Millipore Mono- and Polyclonal Antibodies for the study of PLCG1
    Sigma-Aldrich Antibody Arrays and Antibodies for PLCG1
    R&D Systems Antibodies for PLCG1 (PLC-gamma 1)
    Cell Signaling Technology (CST) Antibodies for PLCG1 
    Antibodies from Abcam (Phospholipase C gamma 1), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (PLCG1)
    Novus Biologicals Antibodies for PLCG1

    Assays for PLCG1: 
    Invitrogen Assays for PLCG1
    Millipore Kits and Assays for the Analysis of PLCG1
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5/13 InterPro domains/families (see all 13 ):
     IPR000909 Phospholipase_C_Pinositol-sp_X
     IPR018247 EF_HAND_1
     IPR001192 Phospholipase_C_Pinositol-sp_C
     IPR001711 Phospholipase_C_Pinositol-sp_Y
     IPR001849 Pleckstrin_homology


       GeneDecks  PLCG1 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P19174

    ProtoNet protein and cluster: P19174

    5 Blocks protein families:
    IPB000008 C2 domain
    IPB000909 Phosphatidylinositol-specific phospholipase C
    IPB000980 SH2 domain signature
    IPB001452 SH3 domain signature
    IPB001849 Pleckstrin-like


    UniProtKB/Swiss-Prot: PLCG1_HUMAN, P19174
    Domain: The SH3 domain mediates interaction with CLNK (By similarity). The SH3 domain also mediates
    interaction with RALGPS1
    Similarity: Contains 1 C2 domain
    Similarity: Contains 1 EF-hand domain
    Similarity: Contains 2 PH domains
    Similarity: Contains 1 PI-PLC X-box domain
    Similarity: Contains 1 PI-PLC Y-box domain
    Similarity: Contains 2 SH2 domains
    Similarity: Contains 1 SH3 domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (PLCG1)
    Millipore RNAi Products for the Analysis of PLCG1 Gene knock-down
    Abnova Chimera RNAi Products for Gene knock-down (PLCG1)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_182811

                  Applied Biosystems Silencer® siRNAs for PLCG1

                  Sigma-Aldrich siRNA and siRNA Panels for PLCG1  
                         Sigma-Aldrich shRNA for PLCG1  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_002660
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_002660
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_002660 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_002660

    UniProtKB/Swiss-Prot: PLCG1_HUMAN, P19174
    Function: PLC-gamma is a major substrate for heparin-binding growth factor 1 (acidic fibroblast
    growth factor)-activated tyrosine kinase
    Catalytic activity: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1D-myo-inositol
    1,4,5-trisphosphate + diacylglycerol
    Enzyme Number (IUBMB): EC 3.1.4.11 

    Genatlas biochemistry entry for PLCG1:
    phospholipase C,gamma 1 (subtype 148),phosphatidylinositol specific,involved in signal
    transduction,directly interacting with phosphorylated PTK2 to promote adhesion-dependent
    association of the two molecules and increase inositol-phosphate production (mouse fibroblasts)

    5 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Plcg1):

    embryogenesisgrowth/sizehematopoietic systemlethality-prenatal/perinatal

    5 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004435 phosphoinositide phospholipase C activity NAS--
    GO:0005057 receptor signaling protein activity NAS7681365
    GO:0005509 calcium ion binding IEA--
    GO:0005515 protein binding IPI10873601
    GO:0016787 hydrolase activity IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    5/30 Invitrogen iPath™ Online BioAtlas - Pathways for PLCG1 (see all 30 ) (Maps provided by GeneGo):
     Angiotensin signaling via PYK2
     A2BR signaling via G-alpha-q: PRKCB/G/Q specific pathways (map 3a)
     A2B receptor: action via G-protein alpha s (map 1)
     TCR and CD28 co-stimulation in activation of NF-kB
     NGF signaling pathway

       GeneDecks  PLCG1 for the pathways selected above  
    About GeneDecksing

    5/31 Millipore Pathways for PLCG1 (see all 31 )
     Transcription Transcription factor Tubby signaling pathways
     Development VEGF signaling and activation
     Apoptosis and survival NGF signaling pathway
     Immune response CD16 signaling in NK cells
     Immune response Role of DAP12 receptors in NK cells

       GeneDecks  PLCG1 for the pathways selected above  
    About GeneDecksing

    5/50 Sigma-Aldrich "Your Favorite Gene" Pathways for  PLCG1  (Your Favorite Gene powered by Ingenuity) (see all 50
     Chemokine Signaling
     Virus Entry via Endocytic Pathways
     ERK/MAPK Signaling
     Erythropoietin Signaling
     CD28 Signaling in T Helper Cells

       GeneDecks  PLCG1 for the pathways selected above  
    About GeneDecksing

    1 Cell Signaling Technology (CST) Pathway for PLCG1: 
     Signaling Pathways Activating p38 MAPK

       GeneDecks  PLCG1 for the pathways selected above  
    About GeneDecksing

    5/14 Kegg Pathways  (Kegg details for PLCG1) (see all 14 ):
     hsa00562 Inositol phosphate metabolism
     hsa04012 ErbB signaling pathway
     hsa04020 Calcium signaling pathway
     hsa04070 Phosphatidylinositol signaling system
     hsa04370 VEGF signaling pathway

       GeneDecks  PLCG1 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  PLCG1 


    5/347 Interacting proteins for PLCG1 (ENSP000003623693 P191741, 2) via UniProtKB, MINT, and/or STRING (see all 347 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ABL1P005191STRING (score=.991) EBI-79387, EBI-375543
    CD22P202731STRING (score=.786) EBI-79387, EBI-78277
    GHRP109121STRING (score=.808) EBI-79387, EBI-286316
    JAK2O606741STRING (score=.948) EBI-79387, EBI-518647
    SOS1Q078891STRING (score=.98) EBI-79387, EBI-297487
    About this table

    4 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007242 intracellular signaling cascade IEA--
    GO:0009395 phospholipid catabolic process IEA--
    GO:0016042 lipid catabolic process IEA--
    GO:0044419 interspecies interaction between organisms IEA--
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Compounds for PLCG1 available from Tocris Bioscience
    CompoundAction CAS number
    AACOCF3Phospholipase A2 inhibitor[149301-79-1]
    U 73122Phospholipase C inhibitor[112648-68-7]
    D609Selective PC-PLC inhibitor[83373-60-8]
    About this table


    10/29 Novoseek chemical compound relationships for PLCG1 gene (see all 29 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    phosphatidylinositol 83.85 242 1814635 (3), 1657936 (3), 1789410 (3), 9136078 (3) (see all 99)
    inositol 1,2-cyclic phosphate 82.43 3 12630878 (1), 2175645 (1), 9003188 (1)
    tyrosine 82.33 526 9570517 (7), 1533389 (6), 1372020 (6), 11502583 (6) (see all 99)
    inositol 1,4,5 trisphosphate 70.74 45 8327490 (3), 1380035 (1), 8717070 (1), 19179337 (1) (see all 35)
    phosphotyrosine 69.89 18 8555205 (1), 10987838 (1), 11208605 (1), 8943348 (1) (see all 16)
    pp36 69.25 1 7544353 (1)
    phosphoinositide 65.61 22 8653074 (2), 9148771 (2), 17558519 (2), 8641669 (1) (see all 15)
    pip2 64.15 19 7673143 (3), 7487955 (2), 10085141 (2), 8641669 (1) (see all 11)
    lysosulfatide 61.16 1 14511654 (1)
    calcium 60.14 155 15872086 (4), 8940074 (4), 16973916 (4), 12632103 (4) (see all 90)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (PLCG1)
    Millipore RNAi Products for the Analysis of PLCG1 Gene knock-down
    Abnova Chimera RNAi Products for Gene knock-down (PLCG1)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_182811

                  Sigma-Aldrich siRNA and siRNA Panels for PLCG1  
                         Sigma-Aldrich shRNA for PLCG1  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_002660  NM_182811  

    REFSEQ mRNAs for PLCG1 gene (2 alternative transcripts): 

    NM_002660.2   NM_182811.1   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_002660  NM_182811  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_002660
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_002660
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_002660 

    Additional cDNA sequence: 

    AB210028.1 AF147391.1 AK098745.1 AK297370.1 AK309606.1 AL110247.1 BC131750.1 BC136466.1 
    BC144136.1 M34667.1 

    21 DOTS entries:

    DT.86842930  DT.100646071  DT.102842995  DT.86844955  DT.100657845  DT.91918243  DT.95345097  DT.120819530 
    DT.92010662  DT.95291216  DT.92433180  DT.97820201  DT.100649850  DT.120819556  DT.92034936  DT.92433177 
    DT.95253741  DT.95353236  DT.95353248  DT.100708296  DT.120819573 

    24/183 AceView cDNA sequences (see all 183 ):

    AI832699 BU741495 BU164407 AA778686 AA441941 BM557119 BX458827 BQ882869 
    BE350139 AL110247 CD672666 BM450712 BM711309 AW851295 AA902444 BQ069687 
    AA641649 BM561485 NM_182811 AL708196 BQ440546 AI187110 BX280811 BF060861 

    highest scoring ESTs for PLCG1:

    M34667 AA331680 AA385590 AA441941 AA442054 AA476669 AA641649 AA778686 AA852993 AA902444 

    Unigene Cluster for PLCG1:

    Phospholipase C, gamma 1
    Hs.268177  [show with all ESTs]
    Unigene Representative Sequence: AB210028


    GeneLoc Exon Structure

    5/12 Alternative Splicing Database (ASD) splice patterns (SP) for PLCG1 (see all 12 )

    ExUns: 1 ^ 2a · 2b · 2c · 2d ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13a · 13b ^ 14 ^ 15 ^ 16a · 16b ^ 17 ^ 18a ·
    SP1:                                      -                 -                             -                                                                     
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:        -                             -                                                                                                                     
    SP5:                                      -                                                                                                                     

    ExUns: 18b ^ 19 ^ 20 ^ 21a · 21b ^ 22a · 22b ^ 23 ^ 24 ^ 25a · 25b ^ 26a · 26b ^ 27 ^ 28a · 28b · 28c ^ 29 ^ 30 ^ 31 ^ 32 ^ 33a · 33b ^ 34a · 34b
    SP1:  -                             -                             -           -                                                                           
    SP2:                                                              -           -                                                                           
    SP3:                                                                                                                                                      
    SP4:                                                                                                                                                      
    SP5:                                                                                                                                                      

    About this scheme

    ECgene alternative splicing isoforms for PLCG1

    3 Ensembl transcripts including schematic representations:
    ENST00000373271  ENST00000244007  ENST00000373272  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    PLCG1 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for PLCG1

    1 / 2 / 3

    6 probe-sets matching PLCG1 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
    1082_at2, 3 U95-A 1 1.00 1.00 0.93 0.86 M34667 1.00 1.00 1.00 1

    34351_at2, 3 U95-A 1 0.31 1.00 0.38 1.14 AL022394 0.20 1.00 0.72 1

    216551_x_at2, 3 U133-A 1 1.00 1.00 -- -- AL110247 0.80 1.00 0.91 1

    202789_at2, 3 U133-A 2 1.00 0.95 -- -- AL022394 0.20 1.00 0.72 1

    216551_x_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    202789_at2 U133Plus2 2 1.00 0.95 -- -- -- -- -- -- --
    GeneDecks  PLCG1 for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: TCCTTAAAAA

    SOURCE GeneReport for Unigene cluster: Hs.268177

    Expression variation in blood from EXPOLDB for PLCG1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for PLCG1 gene from 5/13 species (see all 13 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    PLCG11   -- phospholipase C, gamma 1 91.48(n)
    97.78(a)
    485874  XM_542998.2  XP_542998.2 
    chimpanzee
    (Pan troglodytes)
    PLCG11   -- phospholipase C, gamma 1 99.69(n)
    99.84(a)
    458253  XM_514650.2  XP_514650.2 
    cow
    (Bos taurus)
    PLCG11   -- phospholipase C, gamma 1 90.73(n)
    97.06(a)
    281987  NM_174425.2  NP_776850.1 
    rat
    (Rattus norvegicus)
    Plcg11   -- phospholipase C, gamma 1 90.13(n)
    96.9(a)
    25738  NM_013187.1  NP_037319.1 
    mouse
    (Mus musculus)
    Plcg11, 5 2 (92.00 cM)5
    phospholipase C, gamma 11, 5 90.36(n)1
    96.94(a)1
    188031  NM_021280.31  NP_067255.21 
     AF0271855  AF0271865  (see all 20)
    About this table        Species with no ortholog for PLCG1

    ENSEMBL Gene Tree for PLCG1
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
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    Paralogs for PLCG1 gene
    PLCG22  PLCL22  PLCL12  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
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    10/343 NCBI SNPs in PLCG1 are shown (see all 343 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 205)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 20 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs7533811,2
    A,C,F,H39230879(-) TCTTGA/GTGAAG 2 I/T mis1 ese333Minor allele frequency- N:0.00NA EA MN EU WA NS 3896
    rs22282461,2
    C,F,H39225477(+) TGCTCA/GGCTTC 2 S/G mis119Minor allele frequency- G:0.12MN EU NA EA WA NS 2189
    rs354813641,2
    C,F39198116(+) CATGAT/CTTAAT 2 -- ng515Minor allele frequency- C:0.07NS 190
    rs22293481,2
    C,F39224724(+) CATCAA/CCTACG 2 T/N mis17Minor allele frequency- T:0.00MN NA NS 300
    rs283625871,2
    C,F39199214(+) CGGCCG/TCCCGT 2 -- ng515Minor allele frequency- T:0.17NS 190
    rs348420001,2
    F39199197(+) GCGGGA/GCCGCG 2 -- ng515Minor allele frequency- G:0.01NS 190
    --
    rs358061841,2
    F39236638(+) GGAAG-/AGCAGCC 2 -- ut315Minor allele frequency- AG:0.01NS 188
    rs352022831,2
    F39199161(+) CATGGG/TCGGTG 2 -- ng515Minor allele frequency- T:0.05NS 190
    --
    rs60295591,2
    A39238204(+) TCTTCC/TTGAAG 2 -- ng310--------
    --
    rs354983831,2
    F39198428(+) TGGGA-/ATGCTG 2 -- ng515Minor allele frequency- A:0.06NS 190
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    HapMap Linkage Disequilibrium images for PLCG1 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
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    OMIM: 172420

    10/35 Novoseek disease relationships for PLCG1 gene (see all 35 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    paroxysmal hemoglobinuria nocturnal 51.66 1 2141043 (1)
    tangier disease 32.84 1 9888863 (1)
    leukemia t-cell 23.39 1 18687687 (1)
    astrocytoma 11.16 2 15317582 (1), 10800962 (1)
    leukemia 7.67 1 9157328 (1)
    tumors 5.62 30 14500405 (4), 7812955 (3), 9136078 (3), 16093435 (2) (see all 18)
    niddm 4.19 3 1639386 (1), 9285775 (1)
    virus infection 3.08 1 7886947 (1)
    promyelocytic leukemia 3.01 1 2166587 (1)
    alzheimers disease 2.41 1 1628221 (1)
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    Genetic Association Database: PLCG1
    Human Genome Epidemiology Navigator: PLCG1 (4 documents)

    (Possibly Related Articles in Doctor's Guide)
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      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
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    10/869 PubMed articles for PLCG1 gene (see all 869 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
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    Entrez Gene: 5335 HGNC: 9065 AceView: PLCG1 Ensembl:ENSG00000124181 euGenes: HUgn5335
    ECgene: PLCG1 H-InvDB: PLCG1
    (According to HUGE)
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      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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    NameDescription
    NIEHS-SNPshttp://egp.gs.washington.edu/data/plcg1/
    (Available from WIS Yeda, Salk, Tufts)
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      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



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     Antibodies for PLCG1

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