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Aliases & Descriptions for PLCB2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 3.1.4.11 3 | | FLJ38135 1, 2 | | PLC-beta-2 3 |
| | | Descriptions |
|---|
| Phosphoinositide phospholipase C 3 | | Phospholipase C-beta-2 3 | | phospholipase C, beta 2 2 |
|
| | Search outside databases for aliases for PLCB2 genePrevious GC identifers: GC15M035947 GC15M033475 GC15M038159 GC15M038296 |
Summaries for PLCB2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: PLCB2_HUMAN, Q00722Function: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymesGene Wiki entry for PLCB2 |
Genomic Location for PLCB2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the PLCB2 gene 
Entrez Gene cytogenetic band: 15q15 Ensembl cytogenetic band: 15q15.1 HGNC cytogenetic band: 15q15PLCB2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 15 GeneLoc Exon Structure GeneLoc location for GC15M038367:
(about GC identifiers)
Start:
|
38,367,390 bp from pter |
End:
|
38,387,466 bp from pter |
Size:
|
20,077 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000015.8 NT_010194.16
| Proteins for PLCB2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PLCB2_HUMAN, Q00722 (See
protein sequence)Recommended Name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2 Size: 1185 amino acids; 134024 Da
Cofactor: Binds 1 calcium ion per subunit
Subunit: Interacts with RAC1
Miscellaneous: The receptor-mediated activation of PLC-beta-2 is most effectively mediated by one G-protein alpha subunit, alpha-16
PDB structure from and Proteopedia :2FJU (3D)
 2ZKM (3D)
 
Secondary accessions: A8K6J2Alternative splicing: 2 isoforms: Q00722-1 Q00722-2 Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_004564.2
ENSEMBL proteins: ENSP00000374462 ENSP00000260402
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
Antibodies for PLCB2: Assays for PLCB2: | Protein
Domains/ Families for PLCB2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q00722
ProtoNet protein and cluster: Q00722 2 Blocks protein families: IPB000008 C2 domain IPB000909 Phosphatidylinositol-specific phospholipase C
UniProtKB/Swiss-Prot: PLCB2_HUMAN, Q00722Similarity: Contains 1 C2 domainSimilarity: Contains 1 PI-PLC X-box domainSimilarity: Contains 1 PI-PLC Y-box domain | Gene Function for PLCB2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004573
Applied Biosystems Silencer® siRNAs for PLCB2
Sigma-Aldrich siRNA and siRNA Panels for PLCB2  Sigma-Aldrich shRNA for PLCB2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004573                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004573                                  untagged cDNA clones in CMV expression vector (see all 2): NM_004573 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004573
UniProtKB/Swiss-Prot: PLCB2_HUMAN, Q00722Function: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymesCatalytic activity: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1D-myo-inositol 1,4,5-trisphosphate + diacylglycerolEnzyme Number (IUBMB): EC 3.1.4.11 Genatlas biochemistry entry for PLCB2:phospholipase C,beta 2,predominantly expressed in hematopoietic cells,critical to many chemoattractant elicited responses,involved in signal transduction2 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Plcb2):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for PLCB2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/28 Sigma-Aldrich "Your Favorite Gene" Pathways for PLCB2 (Your Favorite Gene powered by Ingenuity) (see all 28
) 
Gene Network CentralTM Interacting Genes and Proteins Network for PLCB2 
5/125 Interacting proteins for PLCB2 (Q007222 ENSP000002604023) via UniProtKB, MINT, and/or STRING (see all 125
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for PLCB2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Compounds for PLCB2 available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| AACOCF3 | Phospholipase A2 inhibitor | [149301-79-1] | | U 73122 | Phospholipase C inhibitor | [112648-68-7] | | D609 | Selective PC-PLC inhibitor | [83373-60-8] | About this table
7 Novoseek chemical compound relationships for PLCB2 gene
About this table
|
Transcripts for PLCB2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004573
Sigma-Aldrich siRNA and siRNA Panels for PLCB2  Sigma-Aldrich shRNA for PLCB2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_004573 REFSEQ mRNAs for PLCB2 gene: NM_004573.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004573               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004573                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004573                                  untagged cDNA clones in CMV expression vector (see all 2): NM_004573  Additional cDNA sequence: AB209583.1 AK095454.1 AK130831.1 AK291657.1 BC000939.3 BC009009.1 BC136467.1 BT006905.1 CR601877.1 M95678.1 13 DOTS entries: DT.112491 DT.86857819 DT.121039156 DT.91717568 DT.95215191 DT.95278919 DT.121039181 DT.91956934 DT.95169486 DT.100775471 DT.455229 DT.86839669 DT.91717581 24/125 AceView cDNA sequences (see all 125
):AI655426 AW630959 CB126410 CD369500 AW294690 BC009009 AW402206 CR601877 F12578 T28538 T89023 BX099469 CF136301 BM667278 AA310466 BF902936 AK130831 F04675 AA464970 BE242666 BG258587 AW292822 BI909727 AW950600
highest scoring ESTs for PLCB2:M95678 BC000939 BC009009 BE242666 BE539724 BE540889 BF899548 BF922182 BM147371 BM148103 Unigene Cluster for PLCB2: Phospholipase C, beta 2 Hs.355888 [show with all ESTs]Unigene Representative Sequence: NM_004573
GeneLoc Exon Structure
5/15 Alternative Splicing Database (ASD) splice patterns (SP) for PLCB2 (see all 15
)
| ExUns: | 1a | · | 1b | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14a | · | 14b | ^ | 15 | ^ | 16a | · | 16b | ^ | 17 | ^ | 18a | · | 18b | ^ | 19a | · | 19b | ^ | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | |
| SP2: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 20a | · | 20b | ^ | 21 | ^ | 22a | · | 22b | ^ | 23 | ^ | 24 | ^ | 25a | · | 25b | · | 25c | · | 25d | ^ | 26a | · | 26b | · | 26c | ^ | 27 | ^ | 28 | ^ | 29 | ^ | 30a | · | 30b | ^ | 31 | ^ | 32a | · | 32b | |
| SP1: | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for PLCB2
2 Ensembl transcripts including schematic representations: ENST00000389812
ENST00000260402
|
Expression for PLCB2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| PLCB2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for PLCB2
1 / 2 / 3 5 probe-sets matching PLCB2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TACCCCTCTC
SOURCE GeneReport for Unigene cluster: Hs.355888
Expression variation in blood from EXPOLDB for PLCB2 |
Orthologs for PLCB2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for PLCB2 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for PLCB2
ENSEMBL Gene Tree for PLCB2 | Paralogs for PLCB2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for PLCB2 gene
- PLCB32 PLCB42 PLCB12
|
SNPs/Variants for PLCB2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for PLCB2 (up to first 250kb)
|
Disorders & Mutations for PLCB2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 604114 1 Novoseek disease relationship for PLCB2 gene
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| cancer |
0.00 |
1 |
16525635 (1) |
About this table
Genetic Association Database: PLCB2 Human Genome Epidemiology Navigator: PLCB2 (2 documents)
|
Medical News for PLCB2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for PLCB2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/84 PubMed articles for PLCB2 gene (see all 84
):- Cloning, sequencing, expression, and Gq-independent activation of phospholipase C-beta 2. (PubMed id 1644792)2, 3, 4 Park D.... Rhee S.G. (1992)
- Association analysis of two candidate phospholipase genes that map to the chromosome 15q15.1-15.3 region associated with reading disability. (PubMed id 15274049)1, 3, 6 Morris D.W....O'Donovan M.C. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)3, 4 Ota T....Sugano S. (2004)
- Assignment1 of human PLCB2 encoding PLC beta2 to human chromosome 15q15 by fluorescence in situ hybridization. (PubMed id 9925923)2, 3 Park S.H....Kim H. (1998)
- PLC-beta2 is highly expressed in breast cancer and is associated with a poor outcome: a study on tissue microarrays. (PubMed id 16525635)1, 3 Bertagnolo V....Capitani S. (2006)
- Regulatory interactions between the amino terminus of G-protein betagamma subunits and the catalytic domain of phospholipase Cbeta2. (PubMed id 15611108)1, 3 Bonacci T.M....Smrcka A.V. (2005)
- PLC-beta2 activity on actin-associated polyphosphoinositides promotes migration of differentiating tumoral myeloid precursors. (PubMed id 17478077)1, 3 Brugnoli F....Bertagnolo V. (2007)
- Crystal structure of Rac1 bound to its effector phospholipase C- beta2. (PubMed id 17115053)1, 4 Jezyk M.R....Sondek J. (2006)
- Alternative splice variants of phospholipase C-beta2 are expressed in platelets: effect on Galphaq-dependent activation and localization. (PubMed id 17497434)1, 3 Sun L....Rao A.K. (2007)
- The Pleckstrin homology domains of phospholipases C-beta and -delta confer activation through a common site. (PubMed id 12761218)1, 3 Guo Y....Scarlata S. (2003)
|
Search for PLCB2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing PLCB2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing PLCB2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PLCB2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for PLCB2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for PLCB2:

 | |
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|
 |  |  |
| | | | Tocris compounds for PLCB2 |
|
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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